KEGG   Xenopus tropicalis (tropical clawed frog): 100380168
Entry
100380168         CDS       T01011                                 
Symbol
xpo1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008  Ribosome biogenesis in eukaryotes
xtr03013  Nucleocytoplasmic transport
xtr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100380168 (xpo1)
   03008 Ribosome biogenesis in eukaryotes
    100380168 (xpo1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100380168 (xpo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100380168 (xpo1)
   03009 Ribosome biogenesis [BR:xtr03009]
    100380168 (xpo1)
   03016 Transfer RNA biogenesis [BR:xtr03016]
    100380168 (xpo1)
   03036 Chromosome and associated proteins [BR:xtr03036]
    100380168 (xpo1)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100380168 (xpo1)
Ribosome biogenesis [BR:xtr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100380168 (xpo1)
  Pre-60S particles
    100380168 (xpo1)
Transfer RNA biogenesis [BR:xtr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100380168 (xpo1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100380168 (xpo1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3
Other DBs
NCBI-GeneID: 100380168
NCBI-ProteinID: XP_002939551
Xenbase: XB-GENE-993240
UniProt: A0A8J0QZP3
LinkDB
Position
5:33544544..33582092
AA seq 1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNQASPLSNQLFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEYAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgaccatgttagcggaccatgcagctcgacagctgctggatttcagc
cagaaactggacatcaacctgttggacaatgtggtgaattgtttatatcatggggaagga
gcacagcaaagaatggcacaggaggtcttgacccacttaaaagaacacccagatgcatgg
acaagagttgacacaatcttagagttctcacagaacatgaacaccaaatattatggtctg
cagatcttggaaaatgtaataaaaacaaggtggaaaattcttcctcggaaccaatgtgaa
ggaattaaaaagtatgttgtgggactaatcataaagacttcctcagatgcaacatgtgta
gaaaaagaaaaagtgtatatcggaaaactgaacatgattctcgttcagatattaaaacag
gaatggcctaaacattggcccacgtttatcagtgatattgtgggagcaagcagaaccagt
gaaagcctttgtcagaacaacatggtcattctgaaactgttaagtgaagaagtttttgat
ttttccagtggtcagataacacaagtgaaagccaaacacctgaaagacagtatgtgcaat
gagttctcccagatatttcagctgtgtcagtttgtaatggaaaattcacaaaatgctcca
cttgttcatgctactctggaaacgctccttcgatttcttaactggattcctctaggatat
atctttgaaaccaaactcatcagcacgctcatatataagtttttaaatgttcctatgttc
cgaaatgtctctttgaagtgcctcactgagatagctggagtcagtgtgagccagtatgag
gagcagtttgtaacactctttacactgaccatgatgcagctaaaacagatgctgcctttg
aatacaaatattcgtcttgcttattcaaatgggaaagatgatgagcagaattttattcag
aacctcagcttgtttctgtgtacttttcttaaagagcatggacaacttatagaaaaaaga
ctcaacttgagagaaacattaatggaggctctacactatatgttgcttgtttctgaagtg
gaagagacggaaatcttcaaaatctgccttgaatactggaaccatctagcagcagagctg
tacagggagagcccattttcaacatcagcgtctccactactttctggtagccagcatttt
gatgttcctcctagaaggcaattgtatttgcctgttttgtcaaaggttcgactgttgatg
gtgagtcgtatggctaagccagaggaagttctagtagtggaaaatgatcagggtgaagtg
gtgcgtgaattcatgaaggacacagattctattaacttgtacaagaacatgagggaaact
ttggtataccttactcacctggattatgcagatactgagcgaattatgactgaaaaactg
cataaccaagttaatggcactgagtggtcttggaaaaacctaaatactttgtgctgggca
attggatcaatcagtggagctatgcatgaggaagatgaaaagagatttcttgttacagtt
ataaaagatctccttggtctatgtgaacagaagcgtggaaaggacaataaagccatcatt
gcatcaaacataatgtacattgtaggccaataccccagatttctgagagctcattggaag
tttttaaagactgttgtaaacaagttatttgaatttatgcatgaaacccatgatggtgtt
caagatatggcatgtgataccttcattaagattgcacaaaagtgccgtagacactttgtt
caagtgcaggttggagaagtaatgcctttcattgatgagatcttaaacaatatcaatacc
attatatgtgatcttcaaccacaacaggttcacacattctatgaagcagttgggtacatg
attggggcacaaacggaccaaacagtacaagagcatttaattgaaaagtatatgttactt
cctaatcaagtatgggacagtataattcagcaagccacaaagaatgttgatatattgaag
gacccagaaactgttaaacagcttggcagcattttgaaaacaaatgtaagagcatgtaaa
gctgttggtcatccttttgttattcagttgggaagaatttacctggatatgttaaatgtg
tataagtgcctaagtgaaaacatttctgcggctatacaggcaaatggtgagatggtcact
aaacaaccactgatccgaagtatgaggactgttaaaagggaaactctaaaactgatttct
ggctgggttagcaggtccagtgatccacagatggttgctgaaaactttgttcctccctta
ttggacgcagttcttattgattaccagagaaatgtgccggctgccagagagcctgaagta
ctcagcacaatggctactattgtaaacaagttaggggggcatattacggctgaaatacct
caaatatttgatgctgtgtttgaatgcacattgaatatgattaacaaggactttgaagag
tatccagagcacaggacaaactttttcttgcttcttcaagctgtgaattcccactgcttt
cctgcatttttggctatccccccagctcagtttaaactggtgttagattctatcatttgg
gcctttaaacacacaatgagaaatgtcgcagatacaggtctacagattctatacaccttg
ttgcagaatgttgctcaagaggaagctgcagctcagagtttctaccaaacttatttctgt
gacatacttcagcacatattctccgttgtaacagacacatcacatactgccgggttaaca
atgcacgcatcaattttggcatacatgttcaatctagtggaagaaggaaaaataagtacg
cctttgaatcaagctagtcctcttagcaaccagctatttattcaagaatatgtggctaac
cttttaaagtctgcatttccccacttacaagatgcacaggttaaactttttgtgactggc
ctcttcagtttaaaccaggatattcctgcatttaaggaacatcttagggactttcttgta
cagattaaggaatatgctggtgaagacacctctgacctgtttctggaagaaagggaatct
tcccttcgacaagcccaagaggaaaaacacaaactccagatgtctgttcctggcatactt
aatccacatgaaattcctgaagaaatgtgtgactag

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