Xenopus tropicalis (tropical clawed frog): 100380168
Help
Entry
100380168 CDS
T01011
Symbol
xpo1
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008
Ribosome biogenesis in eukaryotes
xtr03013
Nucleocytoplasmic transport
xtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100380168 (xpo1)
03008 Ribosome biogenesis in eukaryotes
100380168 (xpo1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100380168 (xpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100380168 (xpo1)
03009 Ribosome biogenesis [BR:
xtr03009
]
100380168 (xpo1)
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100380168 (xpo1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100380168 (xpo1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100380168 (xpo1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100380168 (xpo1)
Pre-60S particles
100380168 (xpo1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100380168 (xpo1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100380168 (xpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
100380168
NCBI-ProteinID:
XP_002939551
Xenbase:
XB-GENE-993240
UniProt:
A0A8J0QZP3
LinkDB
All DBs
Position
5:33544544..33582092
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNQASPLSNQLFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEYAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgaccatgttagcggaccatgcagctcgacagctgctggatttcagc
cagaaactggacatcaacctgttggacaatgtggtgaattgtttatatcatggggaagga
gcacagcaaagaatggcacaggaggtcttgacccacttaaaagaacacccagatgcatgg
acaagagttgacacaatcttagagttctcacagaacatgaacaccaaatattatggtctg
cagatcttggaaaatgtaataaaaacaaggtggaaaattcttcctcggaaccaatgtgaa
ggaattaaaaagtatgttgtgggactaatcataaagacttcctcagatgcaacatgtgta
gaaaaagaaaaagtgtatatcggaaaactgaacatgattctcgttcagatattaaaacag
gaatggcctaaacattggcccacgtttatcagtgatattgtgggagcaagcagaaccagt
gaaagcctttgtcagaacaacatggtcattctgaaactgttaagtgaagaagtttttgat
ttttccagtggtcagataacacaagtgaaagccaaacacctgaaagacagtatgtgcaat
gagttctcccagatatttcagctgtgtcagtttgtaatggaaaattcacaaaatgctcca
cttgttcatgctactctggaaacgctccttcgatttcttaactggattcctctaggatat
atctttgaaaccaaactcatcagcacgctcatatataagtttttaaatgttcctatgttc
cgaaatgtctctttgaagtgcctcactgagatagctggagtcagtgtgagccagtatgag
gagcagtttgtaacactctttacactgaccatgatgcagctaaaacagatgctgcctttg
aatacaaatattcgtcttgcttattcaaatgggaaagatgatgagcagaattttattcag
aacctcagcttgtttctgtgtacttttcttaaagagcatggacaacttatagaaaaaaga
ctcaacttgagagaaacattaatggaggctctacactatatgttgcttgtttctgaagtg
gaagagacggaaatcttcaaaatctgccttgaatactggaaccatctagcagcagagctg
tacagggagagcccattttcaacatcagcgtctccactactttctggtagccagcatttt
gatgttcctcctagaaggcaattgtatttgcctgttttgtcaaaggttcgactgttgatg
gtgagtcgtatggctaagccagaggaagttctagtagtggaaaatgatcagggtgaagtg
gtgcgtgaattcatgaaggacacagattctattaacttgtacaagaacatgagggaaact
ttggtataccttactcacctggattatgcagatactgagcgaattatgactgaaaaactg
cataaccaagttaatggcactgagtggtcttggaaaaacctaaatactttgtgctgggca
attggatcaatcagtggagctatgcatgaggaagatgaaaagagatttcttgttacagtt
ataaaagatctccttggtctatgtgaacagaagcgtggaaaggacaataaagccatcatt
gcatcaaacataatgtacattgtaggccaataccccagatttctgagagctcattggaag
tttttaaagactgttgtaaacaagttatttgaatttatgcatgaaacccatgatggtgtt
caagatatggcatgtgataccttcattaagattgcacaaaagtgccgtagacactttgtt
caagtgcaggttggagaagtaatgcctttcattgatgagatcttaaacaatatcaatacc
attatatgtgatcttcaaccacaacaggttcacacattctatgaagcagttgggtacatg
attggggcacaaacggaccaaacagtacaagagcatttaattgaaaagtatatgttactt
cctaatcaagtatgggacagtataattcagcaagccacaaagaatgttgatatattgaag
gacccagaaactgttaaacagcttggcagcattttgaaaacaaatgtaagagcatgtaaa
gctgttggtcatccttttgttattcagttgggaagaatttacctggatatgttaaatgtg
tataagtgcctaagtgaaaacatttctgcggctatacaggcaaatggtgagatggtcact
aaacaaccactgatccgaagtatgaggactgttaaaagggaaactctaaaactgatttct
ggctgggttagcaggtccagtgatccacagatggttgctgaaaactttgttcctccctta
ttggacgcagttcttattgattaccagagaaatgtgccggctgccagagagcctgaagta
ctcagcacaatggctactattgtaaacaagttaggggggcatattacggctgaaatacct
caaatatttgatgctgtgtttgaatgcacattgaatatgattaacaaggactttgaagag
tatccagagcacaggacaaactttttcttgcttcttcaagctgtgaattcccactgcttt
cctgcatttttggctatccccccagctcagtttaaactggtgttagattctatcatttgg
gcctttaaacacacaatgagaaatgtcgcagatacaggtctacagattctatacaccttg
ttgcagaatgttgctcaagaggaagctgcagctcagagtttctaccaaacttatttctgt
gacatacttcagcacatattctccgttgtaacagacacatcacatactgccgggttaaca
atgcacgcatcaattttggcatacatgttcaatctagtggaagaaggaaaaataagtacg
cctttgaatcaagctagtcctcttagcaaccagctatttattcaagaatatgtggctaac
cttttaaagtctgcatttccccacttacaagatgcacaggttaaactttttgtgactggc
ctcttcagtttaaaccaggatattcctgcatttaaggaacatcttagggactttcttgta
cagattaaggaatatgctggtgaagacacctctgacctgtttctggaagaaagggaatct
tcccttcgacaagcccaagaggaaaaacacaaactccagatgtctgttcctggcatactt
aatccacatgaaattcctgaagaaatgtgtgactag
DBGET
integrated database retrieval system