Xenopus tropicalis (tropical clawed frog): 100380197
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Entry
100380197 CDS
T01011
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100380197 (tmc6)
03037 Cilium and associated proteins [BR:
xtr03037
]
100380197 (tmc6)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
100380197 (tmc6)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
100380197 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100380197
NCBI-ProteinID:
XP_004918677
Xenbase:
XB-GENE-5811999
UniProt:
A0A6I8RHY5
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Position
10:21092260..21168368
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AA seq
772 aa
AA seq
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MSVTFLLDIPEDNEGDSLGSSTFENGEQETRFGKQQQYTDPDAAFYEQDDHLTATMKILA
NMPSRTIGRSQGAMLSEYYNRTMRRRRGRKRPSVYSLQRSARPSLRLRDGVSDEQDEQQR
LLVSELQNTSGTNRSRLLKSFPLSLNVKRELKQSINDAGGLWRQRNVNPCCTQLRDEVTM
CIHQCWIFSLSVFLSLRPWHVALKQIGGRFGSSVLSYFVFLKTLLEFNIFLSFLCIVFIV
IPQAVHPLNIPNPRVFTGLELLTGAGYFSSTLMYYGYYSNLTLNENCSSGFNITACPAGR
AWFPYHMPLAYLFTIGAAFVSTCIILVYRMSCSFGDSFRVGLFRGATAVKVFSSWDFKVT
QNRSVQRQRENIHMQLKEMLSERLQSDRPVVLKKQLKSIFIHTLSWALCLGSWLGAAVVV
YLLSEHLHQDHRARVKRGGEPEVEAMLLPLPLAVSVLNLLLPYMYHALGLWEKLDFPVLE
VYVAICRNLILKIVVLGVMCYHWLIRKTKFLENKCWETFVGQELYRFVIMDLLFSLLDTL
FGEFLWRIILEKKYKKKCRTEFDIARNVLELIYSQTLAWLGVLFCPLLPVVQVLKLLLLF
YIKKASLMRNCRSPSKPWRASHMNTTFLTLLCFPSFLGASVFFSYTVWSVKPSGTCGSFR
SLTTMYEAGKFYMRELEKSNPGLGWVSWIHHYLVENTFFIYVAAGVLLIVIYFHIQIVNG
QRKIINLLKEQISNEGEDKRFLIERLHSFYEKRSKEKRHSQQQKAYFNPGNT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacttttttgctggacatccctgaagataatgagggagacagcctaggtagc
agcacttttgaaaatggggaacaggaaacaagatttgggaagcagcaacaatacactgac
ccagatgctgccttttacgagcaagatgaccatcttacagccaccatgaaaattctagca
aacatgccgagtagaacaattgggcgctcccagggggcaatgttgtcagagtattataat
cgcaccatgagaaggcgacgaggaaggaagcgaccatctgtttacagcttacagcgaagt
gcaaggcccagcctaagacttagagatggtgtttctgatgaacaggatgaacaacaaagg
ctgttggtatccgagcttcaaaatacatcagggaccaataggagccgtctgctgaagagc
tttcctctgagcctgaatgtaaaaagggagctaaagcagtctataaatgatgctggtgga
ttatggcgacaaagaaatgtcaacccttgctgcactcagctaagagatgaagtgaccatg
tgtattcaccagtgctggatcttctccctctctgtgttcctctctctgcgtccatggcat
gtggcactaaagcagattggtggacgctttggatctagcgtcctttcatattttgtcttc
ctgaagactcttctagaattcaatatcttcttgagctttctttgcatcgtatttattgta
attccgcaagctgtgcatccactgaacattcctaatccacgtgtattcactggcctagag
ctgctcacaggagctggctatttttccagtaccctaatgtactatgggtattatagcaat
cttactctgaatgagaattgttcctctggatttaacattacagcttgccctgccggcagg
gcctggtttccctaccacatgccattggcgtatttatttacaattggagctgcatttgtg
agcacttgcattatcctagtttacaggatgtcatgctcgtttggagatagcttccgtgtg
ggacttttccgtggtgctacggctgtaaaggtgttcagttcatgggattttaaagttact
cagaatcgatcggtacagagacagcgagaaaatatccacatgcagctaaaggaaatgcta
agtgaacgactgcaaagtgaccgtccagttgtcttaaagaagcaactgaagagtattttt
attcacacgctgtcttgggcattgtgtttagggagctggcttggggctgcagtagttgtg
tatctgctgtcagaacatctgcaccaggatcaccgggctcgagtaaaaagaggtggagaa
ccagaggtggaagctatgctcctccctttgcctctggctgtgtctgtgttaaatctactg
ctaccatacatgtaccatgctctaggattatgggagaagctggacttccctgtgctggag
gtttatgtcgccatctgcaggaaccttatactgaagattgtggtccttggtgttatgtgt
taccattggctaatacggaagacaaaatttcttgaaaataagtgctgggaaacctttgtt
ggccaggaattatatcgctttgtgatcatggatcttttattcagtctattggatacactg
tttggagagtttctttggcggatcatcctagagaagaaatacaaaaagaaatgtaggaca
gaatttgacattgctcgaaatgtgcttgagctgatatatagtcagacacttgcctggctt
ggggtgctcttctgtccccttctcccagttgtgcaagttctgaagcttctgctcctgttt
tacataaagaaggccagtctgatgagaaattgtaggtctcccagcaaaccttggagggct
tctcacatgaataccacctttctgacattgctttgcttcccttccttcctgggagcctct
gtattcttctcctacactgtatggtcggtgaagccctcaggtacatgtggttcttttcgt
tccctaaccacaatgtatgaagctgggaagttttatatgcgggagctggagaaatcgaat
cctggcttgggctgggttagctggatccatcattatcttgtggagaatacgttcttcata
tacgtggcagctggagtccttctgattgtaatttacttccacattcagattgtaaatgga
caaagaaaaattataaaccttctgaaagagcagatctctaacgaaggagaggataagcgg
tttctgatagaaaggcttcattctttttatgagaagaggagcaaagagaagcggcattct
cagcaacaaaaggcttattttaaccctgggaacacttaa
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