Xenopus tropicalis (tropical clawed frog): 100484998
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Entry
100484998 CDS
T01011
Symbol
xirp1
Name
(RefSeq) xin actin-binding repeat-containing protein 1 isoform X1
KO
K27381
xin actin-binding repeat-containing protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100484998 (xirp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xin
Motif
Other DBs
NCBI-GeneID:
100484998
NCBI-ProteinID:
XP_002932528
Xenbase:
XB-GENE-6039812
UniProt:
A0A803JCV9
LinkDB
All DBs
Position
6:complement(12896396..12922707)
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AA seq
2481 aa
AA seq
DB search
MEVKDKLKRSHSLHNRTLNYSEAKSLYRRSNSVSELVARYENVRQNTLRKSQTSEQTGVG
RILPERTSLLKWAEEYEKPRGALFQTNSFLGDDNGDKKEKRKSEPKIDKSKERAASGSWQ
AEDLCRGTARMKLTAGAERHQYEALLSPTNQRSQIRGEFHQAQNSFIPSVKQRSELFLSK
AAAAESQARNPKLKFGKETDIYTSPQKKMAENMMKFSPKDAEKKAEVVLPPPPPLDSTQP
SEGPGSQEQSFMPLPPPKESFSKFYEQRQVNELKRLYRHMHPELRKNLEHTVTCDMTKLL
QTDEPTQQAAINQDTGLPGEVQSMRWIFENWNLDAIGEHQGSKKLVDEEGVLGGNVKDTS
MFFKGQPSEGGLPESLPGKDQTKGDVKTALWLFETQSLDSMNKIYPEDTEVQEAILKEPV
ERGDVKSTKHLFETCSLSEVGRCNSVEENSILQLKSEIQELKGDVRKTVKLFQTEPLCAI
RDDNGNIHEIKSICREDTEADNVNRTRWLFETQPLDSIHKNSPKVQIIRGISLEELEKGG
VNAKKWIFETQPLDTIKENNEEGMFQASLDSHEGADSSSFENRECSGNINCTDKVLPGDV
KSTLWLFESQPMETLKGNFEVGPLKKVEMLNEEKGDVKQRKHLFETCSLDKISDKDEEAV
RNVTEISKGDVTTFKNLFETLPLESFEKTSNVTVSDQEDIQVGNVKANQTLFETVPLYAI
EDSLGNFHEVTSISREQVESADVRNYKWMFETKPLDQFNESPQKVDIIRGITKEEIVSGD
VGTAKWLFETQPVDIVHQQSDATEKHSSVQKQVLQKGDVKKCKWLFETQPIDKLYDKSEQ
TKDTEAQVQGDVKSYTWMFESQPLDSFKDSEEQYINVKTTLQDACKGVDVKTSKHLFETE
PIENISSKGEFRKIIRYSSTVQMPSGEVSRVKEIFEATPDKGIGGKGADIPVEENIQKGS
VNKFTWLFENRPLDSMSASTNGFQEVPPEKDVQGGDVVGKRFVFETYSLDQIKQEADETE
IKKVQESVTRGDVKSCMMLFETNPLYAIQDKGGEYHEVTSVKKEEVLKGDVRGAKWLFET
KPLDKINKDEEVFVIRAVTQEDIDKGSVTAARWRFETEPLDSVTEKNKYTGKELEDVQKG
DVQLNKQLFESQQLNQKKYVRLVSVSDVQKGNVRTSTWLFENQPIDSLKGDSDEHPGIVT
VQREDNQRGDVKRCTWLFESQPLDSLKDTDIPTAQGQEEIPQANVKSTTWLFESTPLDKF
ERATSFEQTEVNVKDTLEKCLSYKIIEHKGIAIESVDERSVKMVKYQPTHAGTLIQKEET
LGGNLQRILLQLLHRADLEQHGMLVEENNMGELHRTNLQLIQREGQEEDRQVQDNVSKAL
QILLNEDVLVKTGIIMEETEKGSVRIIIYSVSKYIQRDTSGESIVKGDVKSTIGNLLHNQ
ERERKVSVTREQHERGNVQLYTSCIEKGDLGYLRSLQDESEIEALMLSQSEDAKASTEQA
KKFSEKDGSVQVAEGQRSTIKGKESMCTTSNPAIHCMDPGAKGMKCCVAADGTPLKPTEM
ARNQCILETNVTKNEEKEDNCARQTTSTLPPEGASSRDLHAALLDLRQATAEAKTIQKQV
ECKFQKSTQEVQSCSEQIKGKVVVQSMLPCQTVATTMHSSRSSTSVHEARRSEASFQATT
ASTKKVSVQEKEEQVLPLLETGQERKVIVSTESSIMDGVDSPKKAKSYLNPFLHSDYMTE
PVQADREQDIVRGDVKATIKALQSASSEQRDVEKEEVVRGNLATALQSLERSNVNVSKGD
FKTAMIYRNAGLSHTVSKVNTEDQQIRCQASVKLVPPSDNDFPPPPAAVIEQEHCLPSKI
EAKRDDTMEVQEPAPIFMDSAANKASDTILDENANTLATPQPLMTQRKKPVPPPKPKHLL
PGACPPPHLRAKCQTKSTSSQNSRSTNDCSSKITISKMTNEQWQQQFPSESAYASANRKE
QESEMFACTANEQLKPELCLNNNCESSEISTSKNDHGQANDFHTQIQPLENLVTDTMSQG
VKTETMYCQNSETHNVTRSKKGVTLIEPTPSLHHSENQEVVMRVKRKTETEDEKRKRLSI
HMDEILRGNVRASMDILENMRKQDELERILNKVKELEDETSTVDARSVQGLFESVPDWVV
DSEDEPNSTLKGKDDEKDVILELLRDDTESVSSVELAFEDLEKASTEIKYLKEQTLARLL
DIEETIKKALYSVSSLKSESDIAGLTGLFRESLGSPSPAPCNNIRKISIVSSKAKPEKPV
HLSVQKPTEAFTSQDVTETKKTELNTSNVPSRAISPASPSFITIESAARKPQQNTSCASS
PPKPKALNNGQTPEDSLSKRPYSPQEATSQNSPLNPQRQKSILELKTGPEGPKLIGTTVV
TEKYEECDQFGNKLVRSKTSTTVTKQSDTQSSSTYEVVTALPRYEVTASPRLKRHVENSH
VRGNETGVVFVTFGNSKPAKK
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaaagacaagctgaagagatcacattccttgcacaataggaccctcaactat
tcggaggccaaatccctctacagaaggagcaactcagtgtctgagttagtggcacggtat
gaaaatgtgcgccaaaataccttaaggaagtcgcagaccagcgagcaaacgggtgtgggc
agaattctcccagagagaacaagtctgttaaagtgggcagaggaatatgagaagcccagg
ggggcgctgttccaaactaacagtttcttgggtgatgacaatggtgacaagaaagagaaa
cgcaagtctgaaccgaaaatagacaagagcaaggaaagagcggcatccggcagctggcag
gcagaggatctctgcagggggacggcacggatgaagctgacggccggtgctgaaaggcac
cagtatgaagcattgctgtcacccacaaatcaaaggagccagatcaggggggaatttcac
caagcgcagaatagtttcatcccctcggtgaagcagcgatcggaactatttctctccaag
gcagctgctgcggaaagccaagccagaaatcccaagctgaaatttgggaaggaaacagac
atctacacttctccccaaaaaaagatggccgaaaacatgatgaagttctcacctaaagat
gctgaaaagaaggcagaagtggtgttacctcctccaccacctcttgactcaacccaaccc
tcagaaggaccaggaagtcaagaacagagttttatgcctttgcctccacccaaagaatca
ttctcaaaattctatgagcagcggcaagtgaacgaattaaaaaggctttaccgtcacatg
cacccagagctacggaaaaacctggagcacactgtcacctgcgatatgacaaagctatta
cagacagatgaacccacccagcaggcagctataaatcaggatactggtctgcctggggag
gtgcagtctatgcgctggatctttgagaactggaacttagatgcaataggggagcatcag
ggtagtaagaaactcgtagatgaagagggtgtccttggtggcaatgtgaaagatacatca
atgttttttaagggtcagccaagtgagggtggcctccctgaatctttacctgggaaggat
caaacaaaaggtgacgtgaagacagctttgtggttatttgaaacacagtcacttgactcc
atgaataaaatatatcccgaggacacggaggtccaagaagcaatcctgaaagagcccgtt
gaaagaggagacgtgaaaagcacaaaacatttgttcgaaacctgctccctaagtgaagtg
ggtcgctgcaattcagtagaagaaaacagcatccttcagctcaagtctgaaatccaggaa
ctcaagggtgacgtcaggaaaacggtaaagttgttccagaccgagcctttgtgtgccatc
agggatgataatgggaacattcatgaaataaagtctatatgcagagaagacactgaggct
gacaatgtcaacagaacaaggtggttattcgaaactcagcccttggacagtattcacaag
aacagcccaaaagttcagattattcgagggatttccttggaagaattagaaaagggaggc
gttaacgccaaaaagtggatatttgagactcaaccactggatacaattaaagaaaacaac
gaggaaggaatgtttcaggcttctttagattcccatgaaggagctgattctagttccttt
gagaacagggaatgcagtggtaacattaattgtacagataaggttcttccaggagatgta
aagtccacattgtggctatttgaaagccaacccatggaaacactaaaaggcaattttgaa
gtaggaccattaaagaaggttgagatgctgaatgaagaaaaaggagatgtgaaacaaagg
aaacacctttttgaaacatgttcgctagataaaatttcagacaaggatgaagaagctgtt
aggaacgtaacagagatttccaagggggatgtgacaactttcaagaacctttttgaaacc
ctccccttggaaagttttgagaaaacgagtaacgtcacggtgtctgatcaagaagacata
caagtgggcaatgtgaaagcaaaccaaactttatttgagactgtaccactttacgccatt
gaagacagtttaggaaattttcacgaagttacgtccatcagccgagaacaggtggagagc
gccgatgtgagaaactacaaatggatgtttgaaacaaaaccattagaccagtttaatgag
agtccccagaaagtcgatatcattcgaggaattaccaaagaagaaattgtatccggtgat
gtgggcaccgcaaagtggttgtttgagactcaaccggttgatattgttcatcaacagtca
gatgccaccgaaaaacactcatcagtccagaagcaagtgttacagaaaggggatgttaaa
aaatgcaagtggctctttgaaacccaacccattgataagttatatgataagtcagagcaa
actaaagatacggaagcacaagtccaaggtgatgtgaagtcttacacatggatgtttgaa
tcccaacctttagattcattcaaagattccgaggaacagtatatcaacgtgaaaacaacc
ttacaagatgcttgcaagggggtcgatgtgaagaccagcaaacatctttttgaaactgag
ccaatagaaaacatttcctccaaaggtgaattcagaaagatcatcagatactccagtaca
gttcaaatgccatctggtgaagtttccagggtaaaggaaatttttgaggctacccctgat
aaaggtattggggggaaaggggcggatattcccgtagaagaaaacatccagaaaggttct
gtgaacaaatttacgtggcttttcgaaaaccgtcctcttgattccatgtcagcaagtaca
aatggttttcaagaagtgccccctgagaaggatgtccaagggggagatgttgtagggaaa
agatttgttttcgagacatactctttggaccaaatcaaacaagaagccgacgaaactgag
atcaaaaaagtccaagaatccgttacccgaggggatgttaaatcctgtatgatgttgttt
gaaacaaaccctctgtatgctattcaagacaaaggaggagaatatcatgaagtcacatca
gtaaaaaaggaagaggtcctcaaaggagacgtaagaggcgccaaatggttgtttgaaacc
aaacctctcgacaagatcaataaagatgaagaggtttttgtaatcagagctgtgacgcaa
gaagatatcgacaaaggctctgtcacagctgctaggtggaggtttgaaacagaaccactt
gattccgtgactgagaaaaacaaatatactggaaaagaacttgaagatgtacaaaaagga
gatgttcagttaaataagcagctattcgagtctcagcagctaaaccagaagaagtacgtt
aggcttgtgagcgttagtgatgtccaaaagggaaacgtcaggacgtcaacttggctgttt
gaaaaccaacccattgattctttaaaaggagattctgatgagcatccagggattgtaaca
gtacagcgtgaggataaccagcggggagatgtaaagaggtgcacctggttatttgagtct
cagcctttagacagtctcaaagatacagacattcctactgcccaaggccaggaagagatt
cctcaagctaatgttaaaagcacaacatggctgttcgaaagcacacctctggataaattc
gagcgagcaaccagttttgaacagacagaagttaatgtgaaagatactctagaaaaatgc
ctgtcctacaaaataattgaacataaagggattgctatagaatccgtagatgagaggagt
gtgaaaatggtcaagtatcaacccacacatgcaggtacattaatccaaaaggaggagaca
ctgggaggcaacttgcaaagaatactgttgcagctgcttcaccgagctgatctagaacaa
catggcatgcttgttgaagaaaataatatgggagaacttcatagaaccaatttgcaacta
atacagcgagaaggacaagaggaagacagacaagtacaggacaatgtatctaaggccctt
cagatcttgttgaatgaagatgttcttgttaagactgggatcataatggaagaaactgaa
aagggctccgtgagaattattatctactctgtttcaaaatacattcagagggatacaagt
ggcgaaagtattgtcaagggggatgtaaaatcaacgatcggaaatctacttcataaccag
gaaagagagcgtaaagtttcagtgacacgtgagcaacatgagaggggcaatgtccaactg
tacactagctgtatcgagaagggagatcttggttacttaagaagccttcaggatgaatca
gaaatagaagctcttatgctttctcaaagtgaggatgccaaagcttcaactgaacaagca
aagaagttcagtgagaaagatggatctgtacaggtagcagaaggccaaagatctactatt
aaagggaaagaaagtatgtgcacaacatctaatcctgccattcactgtatggatcccgga
gctaaagggatgaaatgttgtgtggctgctgatggtacaccattgaagcctactgaaatg
gctagaaatcaatgcatccttgaaacaaatgttacaaagaatgaggaaaaggaagataac
tgtgccaggcagacaacatctacacttccacctgagggtgcaagcagcagggatcttcac
gctgctctcttggaccttagacaagctacagctgaagctaaaactatccaaaagcaagtg
gaatgcaagtttcagaaaagcacacaggaagttcagtcttgcagtgaacaaatcaaaggg
aaggtggtggttcagtccatgctgccatgtcagacagttgcaaccacaatgcactcatct
cgcagcagcacttcagttcatgaagcacggaggtctgaagcaagctttcaagcaacaacc
gcatcaaccaaaaaggtcagtgttcaggagaaggaagagcaggttctaccattattggaa
actggacaggaaaggaaagtgatcgttagcacagaaagtagcattatggatggtgttgac
tctcccaagaaagcaaaaagctatttaaacccttttctccattctgattatatgacagaa
ccggtccaagcagaccgagagcaggatattgtcaggggagatgtaaaggcaactatcaaa
gcattgcagagtgcatcatcagaacagagagacgtagaaaaggaagaagtcgtaaggggt
aatctagcaactgccctacagtctttggaaagatctaatgttaatgtttcaaaaggtgac
tttaaaacagctatgatatacagaaatgcagggttatctcatacagtgtctaaagtcaac
accgaggatcagcagattaggtgtcaggcttctgtgaaactggtgccaccgtctgataat
gactttcctcctcctccagctgctgtgattgaacaagaacattgcctgcccagtaagata
gaagccaaaagagatgacactatggaggtgcaagagcctgctcctatattcatggattct
gctgctaacaaggcaagtgatacaattctggatgagaatgcaaacactttagcaacacct
caaccattaatgacccagaggaaaaagccagtcccaccacccaaaccaaagcatcttctc
ccaggtgcctgccctcctccacatcttagggctaagtgccagacgaagtcaacttcatcc
caaaattctagaagcacaaatgactgttcctctaaaatcaccataagcaaaatgactaat
gaacagtggcaacaacaattcccaagtgagagcgcctatgcctctgcaaacaggaaagaa
caagagagtgaaatgtttgcttgtacagccaatgagcaactcaaaccagaattgtgcttg
aacaacaactgtgaaagttcagagatatcaacaagtaaaaatgatcacggtcaagctaat
gacttccatactcaaatacaaccactagagaatttagtaactgatacaatgagtcaaggg
gtcaaaactgagacaatgtactgccaaaacagtgagacacacaatgttacccggagtaaa
aaaggtgttactctcatagaacctactccaagtctacaccacagtgaaaaccaagaagtt
gtcatgagagtaaaacgtaaaacggaaacagaggatgagaaacgcaaaaggttatccatc
cacatggatgagatacttcggggcaatgttagggcatccatggacattctggaaaacatg
aggaaacaggatgagctagagaggatattgaacaaagtcaaggaactggaagacgaaacc
agcacagttgacgcaaggtctgtccaaggcctgtttgagagtgttccagactgggtcgtg
gacagtgaagatgagccaaattctacactgaaggggaaagacgatgagaaagatgtcatt
ttagagttattgagagatgatacagaaagtgtatcctctgtggagcttgcatttgaggat
ctggaaaaggccagtaccgaaattaaatatctgaaagagcagaccttggcaagactttta
gacattgaagagacaatcaaaaaggcactttactctgtttcgagtttaaagtctgaatct
gatatcgctggactcactggactgttccgtgaatcgctgggttccccaagcccggcccca
tgtaataatatccggaaaatcagcattgtttcaagtaaagcaaagccagagaagccagtg
catctctcagtacagaaacccacagaggccttcactagtcaagatgttaccgagacaaaa
aagacagagcttaataccagcaatgttcctagtcgtgccatctctcccgcttccccttca
tttatcactatcgagtctgctgccaggaagccacaacaaaacaccagttgtgcttcttca
cctccaaagccaaaggctttaaacaatggacaaacccctgaagattcgcttagcaaaagg
ccttatagcccccaagaggctaccagccagaacagtccacttaacccacagcgacaaaag
agcatcctagagttaaaaacagggccagagggtccaaaactcattggcaccaccgtagtg
acagaaaagtacgaagaatgcgatcagtttggcaacaagttagtacggtcaaagacatcc
acaacggtcacaaagcaatcggacactcagagttcatcaacgtatgaggtggtgaccgct
ctacctcgctatgaagtcactgcatccccccggcttaaacgacacgttgaaaactcccac
gtcagaggcaatgaaacgggggtcgtatttgtgacatttggcaattcaaagccagcaaag
aaataa
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