Xenopus tropicalis (tropical clawed frog): 100485051
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Entry
100485051 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100485051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485051
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100485051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
zf_UBZ
BHD_1
zf-met
FYDLN_acid
Zn-ribbon_8
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
100485051
NCBI-ProteinID:
XP_031760220
Xenbase:
XB-GENE-996292
UniProt:
A0A803K2N0
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Position
6:5885942..5893186
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AA seq
661 aa
AA seq
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MDKRRLTSDTQDSRLLSFPVVRLERIKNDSGKYQPISEELQKMEQRKMNGLPQKNKEERR
RLSAAGYRLVPYGSGITEMNRERREGLGARKQTGSDTNRKFPTCNGFVARSAHSNQPPVL
QKPHAQEMNSAPKAQQNQMPQLCTVTGGKLIVTPKLTKHTQPDAEEKLHGSQKKINIISG
KNLKPGKAQSTKQTVFPKPFGVINPFVCVKCKRRFGSNGNLLIHQLIHTERPFSCTDCGK
CFSHRTILREHRRAHMGKGPFPHSTGGNKIPSGKGNFQRHQGASAKGKPLTCTECGKSFK
DKSNLLIHERTHTGEKPYVCTQCGKGYSRKGSLNAHLRIHSTEKPFSCIECGKCFHEKRD
LKSHEKTHTGVKDFVCTECGKPFAHKKHLRQHQLIHTGEKPFVCSECGKSYRQKKSLNIH
LRVHTGEKPFACTECNKTFRSERGFQIHKQLHAGLKPFQCNECGQSFITRGDLTVHQRKH
TGEKPFTCAECGKSFAIQGSLDKHSDTHAGKKPYACTECGKCFAQKQRLKYHQYIHTGEK
PFQCKECGESFASHSRLSSHQKIHTGGKPFQCTECGKCFDYTWNLKAHQRIHTGIKAFGC
TECGKHFYDNKSLRRHLMVHTGEKPFVCTECGKRYRDKCSLNNHMNSHTGEKPSASRDHG
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaggcgacttaccagtgatacccaggattcccggctgctcagtttcccagta
gttagactggaaaggataaagaatgattctgggaaatatcagccaatatctgaagaactg
cagaagatggagcaaaggaaaatgaatggccttccccagaagaacaaggaggagaggagg
agactcagtgctgctggatacagactggttccatatggatcaggaatcacagagatgaac
agggagaggagagaagggcttggtgcaaggaagcagacaggaagtgacacaaacaggaag
ttccctacatgcaatggctttgttgccagatctgcccacagtaaccaacctccggtgctt
cagaaacctcacgcccaggagatgaattctgccccaaaagcccaacagaaccaaatgccc
caactttgcacagtaactggggggaagctgattgtaacccccaaattaacaaaacacaca
cagcctgatgctgaggaaaagctacatggaagtcagaaaaagataaacattatttcaggg
aaaaacctaaagccaggaaaggcccaaagcacaaagcaaactgtgttccctaaaccattt
ggggttataaatccgtttgtctgtgttaagtgcaagagaaggttcggcagcaatgggaac
ctcctcatccatcagctcattcacacagagagaccgttctcttgcactgattgtgggaaa
tgtttctcccacagaaccatcctccgagagcaccgccgggctcatatgggaaaggggccc
ttcccccacagcactgggggcaataaaatcccatcaggtaagggcaactttcagaggcac
caaggggcgagtgctaaagggaaaccacttacctgcactgagtgtgggaaatcatttaaa
gataaatctaatttgctcatacatgaacgcacacacaccggggagaaaccttatgtttgt
acccaatgtggtaaaggctattcccggaaggggagtcttaatgcacatttacgtattcat
tccacagagaaaccatttagctgcattgagtgtgggaaatgtttccatgagaagcgggat
ctcaaatctcatgagaagactcacactggggttaaagattttgtctgtacagagtgtggg
aaaccgtttgctcacaaaaagcacctccgccaacaccagctgattcacaccggtgagaaa
ccatttgtctgcagtgagtgtgggaaaagctacaggcagaagaagagcctaaatattcat
ctgcgagttcacacaggagagaaaccctttgcctgcacggagtgcaataaaaccttccga
tcagagagagggttccagatccacaaacagcttcatgctggtctgaagccttttcagtgc
aatgagtgtggtcagtccttcataacaaggggggatcttacagttcatcagcggaaacat
acaggggagaaacctttcacctgtgccgaatgtgggaaaagcttcgcaatacaaggatcc
ttagataaacacagtgacactcacgctggcaagaagccatacgcctgtacagagtgtggg
aaatgttttgctcagaagcaaagactaaaataccaccaatatatccatactggggagaaa
ccatttcagtgtaaggagtgtggggaaagctttgcatctcattcaaggcttagtagtcat
cagaagattcacacagggggaaaaccctttcagtgcacagaatgtggcaagtgttttgat
tatacatggaatcttaaagctcaccagcggattcacactgggattaaagcttttggatgc
accgagtgtgggaaacatttctatgacaataaaagcctccggcggcacctgatggttcac
accggtgagaagccgtttgtctgtactgagtgtgggaaacgctacagggacaagtgcagc
ctaaataatcatatgaattctcacacaggagagaaaccttcagcctctagagatcatggc
aaatga
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