Xenopus tropicalis (tropical clawed frog): 100485062
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Entry
100485062 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X2
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100485062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485062
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100485062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-C2H2_jaz
DUF6434
Trm112p
zf-C2H2_11
HypA
zf-met
Zn-ribbon_8
Zn_Tnp_IS1595
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
100485062
NCBI-ProteinID:
XP_004915669
UniProt:
A0A803J651
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Position
6:2754919..2765915
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AA seq
612 aa
AA seq
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MSGPTPVTSEAPIESPKTNQLSKGQRPGKPFVCAKCKRRFSHKGNLLIHRQIHTKKRSVC
PKCGKRFSDRRILLAHCWAHTGVKPFTCAECNKGFLWKRDLHGHQQVHQEEKPHVNNLCT
QTEGDHCIFQTTDTYKIEPDAQTKESRFDSNQCESMHMYKTEPDAQSEGDCFVSKCETTD
NRELDASLETRTEEKPFACNSCGKSYRDEHELKAHSRSHSGERRFVCSECGKSFKAKCKL
DDHLRTHTGEKPFTCSECGKCYRRKSDLVDHKKVHTHKNSFICPECGKSYASKRNLKAHL
NVHTGNTFQCTECGKSFPKKSSLQRHQMVHTGEKPFECTDCGKLFPFKKNLLRHQMIHTG
EKPYECTECGKHFRYKSRLNIHYLVHAGVKPFSCSECGKQYTSRYALDYHLLTHTGEKPF
VCTECGKAFRVRQGLRLHLQCHTGEKPFLCIECGEAFRVRQSLRLHLQFHTGEKPFPCPE
CGACFRRKVELQRHLVSHIGARPFACTECEKTFRTKSECDDHYYTHKGEKPFVCNECGKC
YSMRRSLLSHLRIHTGEAPFVCAECGKSYRVRRSFLTHLRTHSGERPFVCAECGKSYRDN
KCLLVHLHSHQQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtccaacaccagtcactagcgaggcgcccatagaaagcccaaagacaaaccag
ctctctaaaggccaaaggccagggaagccatttgtttgtgccaagtgtaagagacgattc
tctcacaaagggaaccttctcatccaccggcaaattcatacaaagaagaggtccgtctgt
cccaaatgcgggaaacgtttctccgacagaaggatccttttagctcactgctgggctcat
actggggtgaaaccattcacttgtgctgaatgtaataaaggttttttgtggaaacgagac
cttcacgggcatcagcaggtccatcaagaggagaaaccccatgttaataacctttgtact
caaacagaaggggatcattgtatatttcaaacaacggacacatataaaattgaacctgat
gctcaaacaaaagagagtcgttttgactctaatcagtgtgaatcgatgcacatgtataag
actgaacctgatgctcaatcagaaggggattgttttgtctctaagtgtgaaacaacggat
aatagagaacttgatgcttctcttgagactcgcacagaggagaagccctttgcctgtaac
tcatgtgggaagagctacagagatgagcatgaactcaaggcccactcgcggagtcactca
ggagagaggcgttttgtttgcagtgagtgcgggaaaagctttaaggccaaatgcaagctg
gacgaccatcttcgaactcacacaggagagaaaccattcacttgttctgaatgcgggaaa
tgttacaggaggaaatcagacctggtcgatcataagaaagttcatacccacaaaaactcc
tttatctgccccgagtgtgggaaaagctacgcaagtaaaagaaatctaaaggctcatctt
aacgttcatacaggaaatactttccagtgcaccgagtgtgggaaatccttcccaaagaag
agcagccttcaaaggcaccagatggtccacaccggggagaaaccatttgagtgcacagat
tgtgggaaattatttccattcaagaagaaccttctaaggcaccaaatgattcacacaggg
gagaaaccatatgagtgcacagagtgcgggaaacactttaggtacaagagtaggctcaac
attcattatttagttcatgccggggttaagcctttctcttgttcagagtgtgggaaacag
tatacttcacgatatgcacttgactatcacctgttaactcacacaggggagaaaccattt
gtctgtaccgagtgtgggaaagccttcagggtaaggcagggtctcaggctacatcttcag
tgtcacacaggggagaaaccattcctctgtattgagtgtggggaagccttcagggttagg
cagagcctcaggctacatcttcagtttcacacaggggagaaaccatttccctgccccgag
tgcggcgcttgcttcaggagaaaagtagaacttcagcgtcatcttgtgagtcacatagga
gcgagaccttttgcctgcaccgaatgtgagaaaaccttcagaacaaaaagtgagtgcgac
gatcattattatacgcacaaaggagagaaacccttcgtctgcaacgagtgcgggaaatgt
tacagtatgagacgtagtcttctctctcatctacggattcacactggggaggcgcccttt
gtctgtgccgagtgcggcaaaagctacagggtacggcgcagtttccttacccatctaagg
actcacagcggagagaggccctttgtctgtgccgagtgcggcaaaagctacagggataac
aaatgtctcctcgttcaccttcacagtcaccaacaataa
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