Xenopus tropicalis (tropical clawed frog): 100485165
Help
Entry
100485165 CDS
T01011
Symbol
flnb
Name
(RefSeq) filamin-B isoform X4
KO
K27392
filamin-B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100485165 (flnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100485165 (flnb)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100485165 (flnb)
Intermediate filaments
Intermediate filament-binding proteins
100485165 (flnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Invasin_D3
Big_3_5
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
100485165
NCBI-ProteinID:
XP_002935093
Xenbase:
XB-GENE-494642
UniProt:
A0A8J0QMD8
LinkDB
All DBs
Position
4:148194881..148364651
Genome browser
AA seq
2603 aa
AA seq
DB search
MPVTEKDLAQDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQK
RMYRKYHQRPTFSQMQLENVSVALEFLERENIKLVSIDSKAIVDGNLKLILGLIWTLILH
YSISMPVWEDEGDEETKNQTPKQRLLGWIQNKIPQLPITNFSQNWQDGKALGALVDSCAP
GLCPDWESWDPKKPVENAREAMQQADDWLGVPQVIAPEEIIDPNVDEHSVMTYLSQFPKA
KLKPGAPLKPKLNPKKARAYGLGVEPTGNMVKRSAPFTVETISAGTGEVLVYIEDPEGNR
EEAKVTGNNDKNKTFSVEYVPKVTGMHKVTVLFAGQHIAKSPFEVNVEKAQGDASKVTAK
GPGLEPIGNIANKPTYFDIYTAGAGVGDIGIEVIDPQGRNNTVELALEDKGNCVYRCTYK
PIKAGPHNVAINFGGEATPKSPYLVSIGEACNPNACRANGRGLQPKGVRIRETADFRVDT
KAAGSGDLHVSVKGPKGLDEVLKQSESLDGLHLFEYYPLTPGKYVVAITWGGHHIPKSPF
EVQVALEAGPQKVRAWGPGLYSGMAGKAADFVVESVGSEVGSLGFAIEGPSQAKIECEDQ
GDGSCDVRYWPKEPGEYAIHIMCDDEDIQNSPYMALIQPASGDIDPDKVKAYGPGLEKTG
CIVSTPAEFAVDPTDAGKAALKIYSQDVEGNPVDIMTKEKPDGTYACSYTPAKPIKHTVA
VTWGGVSVPNSPFRVNIGQGSHPHLVKVFGPGVEKTGLKANEPTHFTVDCTEAGEGDVSV
GIKCDARVISDEEEDIDFDIIPNANDTFTVKYMPPAAGRYTIKVLFAGEEIPESPFRIKV
DPSHDASKVRAEGPGLSKSGVENGKPSHFTVYTKGAGKAPVDVSFTGPAPGDAVKDFEII
DNYDYSHTVRYTPVQQGKMKVAVNYGGDPIPKSPFTVGVAAPLDLNKIRINGLESRVEVG
KDQQFIVDPNGAGGQGKLEVKISSPSRKSVPCLVEPVPGNECSTVKYIPKEEGLYNVDVS
YDGNPVPGSPYVVEATLPPDPSKVKAYGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEG
PCEAKIECSDNGDGTCSVSYLPTTPGEYFVNILFEETHIPGSPFQANVEMPFDPSKVIAT
GPGLEHGKVGEAGLIHVDCSQAGPGNLAVEAVSDSGSKAEVNVQDNKDGTYTVTYVPLFA
GMYTLALKYGGEQVPKFPARVKVDPAVDTSKIKVFGPGIEEKGVFREATTDFTVDAKSLT
KTGGNHVKTKITNPSGASTDYLLRDNGDGTYYVEYTPFEKGAHAIKVTYDDEPVPNSPFK
VGVTEGCYPDRVKAQGAGLTEALTNKPNLFSVITRGAGIGGLGITVEGPSESKMSCKDNK
DGSCSVEYTPYVTGDYDVNITYDGEHIPGSPFRVPVKDVVDPSKVKISGPGLGTAVRAKI
PQQFTVDTSKAGIAPLAVQVTGPRGTVEPVDLVDNGDGTHTVSYTPTLEGPYTVAVQYAD
EEIPRSPFKVKVLPTYDASKVTASGPGLCAQGISASLPVNFAVDAKNAGLGPLSVQITDQ
EGKPKKAQIQDNNDGTYSVSYIPDRTGRYHVAVKYGGDDIPYSPYRIRAMSIGDASKCTV
AGPGIQAAVKTGEEVGFVVDATTAGKGKVTCSILGPDGLENEADVIENVDGTYDIYYTTA
KTGPYVIHVRFGGADIPNSPFTVMATDEVPVQVQQQSLSACPPGYQPLVSETDYAQVGSM
NGLSFRPFDLVIPFAIRTGEITGDVHMPSGKTAPADIVDNKDGTVSIRYVPTETGLHELA
IKCNGAHIPESPLQFFVNYPNTGSVSAYGPGLIYGVANKPATFTIITEDAGEGGLDLAIE
GPSKAEISCIDNKDGTCTVTYLPTLPGDYNILVKYNDTHIAGSPFIAKITDDSRRRSQVK
LGSTADFLLDITETDLSLLSASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIK
KNGRHIPNSPISIMVYQSEIGDASKVKAFGPGLIEGRTYEMSDFIVDTREAGYGGLSLAV
EGPSKVDIQTEDLEDGTCQVSYCPTEPGVYIVSIKFADEHVPGSPFTAKVMGEGRVKESI
TRRRKAPSVASVGGLCELNLKIPEIDRNELTAEVVSPSGRKQEAEIVDLGQNTSCVRFVP
QETGIHTVSVKYRGEHVPGSPFQFTVGPLGEGGAEKVKAGGPGLERGEAGVPAEFSIWTR
EAGAGGLSIAVEGPSKAEISFEDRKDGSSGVSYVVQEPGDYDVIIKFNDEHIPQSPFLVP
IVATSDDARRLTVTSLQESGLKVNQPASFAIRLNGARGKIDAKVHSPSGAVEECFVTELE
PDKYAVRFMPRENGIHMIDVKFNGSHVPGSPFKVRVGEAGQEGDPGLVTAYGDGLETGTT
GKQSEFIINTSKAGPGALSVTIEGPSKVTMECKECPEGYRVLYTPMAPGIYMIGVKYGGP
NHIVGSPFKAKVTGQRLVGIGGTSETSSIIVQSVTRASTETTYSALPRFASDATKVTSKG
AGLSKAFLGQKSTFTVDCSKAGSNILLVGVHGPTLPCEEVSIKHLGNKHYTVHYHVKERG
DYMLVVKWGEEHIPGSPFHITVP
NT seq
7812 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacggagaaggacctggcccaggacgcgccatggaagaagatccagcagaac
accttcacccgctggtgcaacgagcacctcaagtgcgtcaataagcgcatcggcaacctg
cagaccgacctgagcgacgggctgcgactgatcgcgctgctggaggtgctcagtcagaaa
aggatgtaccgcaagtaccaccagagacccaccttcagccagatgcagctggagaacgtt
tcggtggccctggagttcctggagagggagaacatcaagctggtgtctatagacagcaaa
gctattgtggacggcaacctaaagcttatcctcggcctgatatggacccttatcctgcat
tattccatctccatgcccgtttgggaagatgaaggtgatgaggaaaccaagaaccagacg
ccaaagcagagacttctgggctggatccagaacaaaatccctcagctgccaatcaccaat
ttcagccagaactggcaggatggaaaggcactgggagctctggtggatagctgtgcccca
ggattatgtcccgattgggaatcttgggaccctaagaagccggtggagaatgccagggag
gctatgcagcaagctgatgattggctaggagtccctcaggtgattgctccagaagaaatc
attgatccgaatgtggatgaacactctgtaatgacctacctgtcacagttccctaaagcc
aaattaaagcccggggcacccttgaagcccaaactgaacccgaagaaagccagagcttat
ggattaggtgttgaaccaactggtaatatggtgaaaagatcagcaccgtttactgtggag
accatcagtgcagggacaggcgaggttctggtgtacatagaagatccagaaggcaacagg
gaagaggccaaggtcacaggaaacaatgacaagaacaaaacattttcagtggagtatgtc
cctaaagttacaggcatgcataaggtcacggttctgttcgccgggcaacatattgcaaag
agtccatttgaggtcaacgtcgagaaggctcagggagatgccagcaaggtgaccgccaaa
gggcccggcttggagcctatcggaaacattgccaataagccgacgtattttgacatttat
acagcaggggcgggagtaggggacattggcatcgaagtgatcgacccccagggcaggaac
aacacagtggaactggccctcgaggataaaggcaattgtgtctaccgatgtacatacaag
cccattaaagccggacctcacaacgtcgccatcaactttggaggtgaagccacaccaaaa
agcccttacctggtcagcattggtgaagcctgcaaccccaatgcctgccgagccaacgga
cgtggcctgcagcccaaaggcgtcagaatccgagaaactgctgattttagggtcgacacg
aaagctgcaggaagtggcgaccttcatgtttctgtcaaagggccaaagggcttggacgag
gtgctgaaacagtcggaatccctggatggactccatttatttgagtactatcccctgact
cccgggaagtatgtggtcgcaatcacgtggggcggccatcacatcccaaagagtccattt
gaggtccaggtggctctggaagctgggccccaaaaggtacgcgcttggggtcctggactg
tatagtggaatggctggaaaggctgcagactttgtggtggaatctgttggctccgaggtt
ggctccttaggttttgccatagaaggtccctctcaagccaaaatcgaatgcgaagaccaa
ggcgatgggtcatgtgacgtcagatactggccaaaggagccgggggaatatgccattcac
atcatgtgtgacgatgaggacattcagaatagcccgtacatggccttgatccagcccgcg
tccggagacatagatcctgataaggtgaaagcttatggcccagggctggagaaaactggc
tgcattgttagtacccctgctgagtttgctgtagatccaacggatgctggaaaagcagca
ttaaagatctattcccaggatgtggaagggaatccagtagatatcatgaccaaagagaag
ccagatggtacctacgcctgctcatacacacctgccaagccaatcaaacacacagtggct
gtcacgtggggcggagtcagcgtgcctaacagtccatttagggtcaatattggacaaggc
agccacccacatttggttaaggtttttggccccggtgtggagaaaactggtttgaaagca
aatgagccgactcactttacagttgactgcaccgaggcaggagaaggtgatgtgagcgtc
gggattaaatgtgacgcgcgcgtgatcagcgatgaggaggaagatattgactttgatatt
attcccaacgctaacgacacctttaccgtgaaatatatgccaccggctgccgggcgttat
accattaaagtgctcttcgccggagaagaaattcctgaaagtccctttagaatcaaagtc
gatccctcgcacgatgccagcaaagtgagggccgaggggccaggactgagtaaatctggt
gttgaaaacgggaaaccctcacactttaccgtctataccaaaggcgcagggaaggcgccg
gttgatgtttcctttactggacctgccccaggggatgcagtgaaagactttgagatcata
gacaactacgattactcacacaccgtccgatacactcccgtacagcagggcaaaatgaaa
gtggctgtaaattatggcggcgaccctatccccaagagtcccttcaccgtaggtgtggca
gcaccactggacctgaacaagatcagaataaatggcctggaaagtagagtggaagttggt
aaagatcagcagtttattgtggaccctaatggagctggtggacaaggaaaactggaggtg
aagatctccagcccgagtcggaaatcagtcccgtgtttggtggaacctgttcctggtaat
gagtgcagcactgtcaaatatattcccaaagaggagggtctctacaacgtggatgtgagt
tatgatgggaatccagttcctggaagtccatatgtagtggaagccactttgcctccagat
ccttcaaaggttaaggcctatggaccaggtctggaaggaggtcttgttggaaagcctgct
gaatttaccattgatacaaaaggagccggaactggtggcttgggtctgaccgtcgaaggt
ccttgtgaagccaagattgaatgttctgacaatggtgatggcacatgttctgtctcctac
cttcctactacaccaggagaatattttgttaatattctttttgaggaaacccacattccg
gggtcaccttttcaagcgaacgtggaaatgccctttgatccttccaaagtaattgccaca
ggtccaggccttgagcatggcaaagtaggagaagcgggcttaattcacgtggactgttcc
caagcaggaccaggtaacctggcagtagaggctgtctctgattctgggtcaaaggcggaa
gtcaacgtacaggataacaaggatgggacttacacggtcacctatgtgccactttttgct
ggcatgtatacactagcactgaaatatggtggagaacaagtgccaaagtttcctgcccga
gttaaagttgatccagccgtggataccagtaagatcaaagtgtttggaccaggaatagaa
gaaaaaggagtttttagagaagctacaaccgactttaccgtggatgccaaatcactaacc
aaaaccgggggcaatcacgtcaaaaccaaaattaccaatccatccggagcgtccaccgat
taccttcttagagacaatggagatggcacttactacgtagagtacactccttttgaaaaa
ggcgctcatgcaattaaggtgacctacgatgacgaaccggtccccaacagcccattcaaa
gtgggagtgacagagggctgctaccctgatcgcgtgaaagcccaaggtgctggactcaca
gaggctttgacaaacaagccaaatttgttttcagtcattacaaggggggctgggattggc
ggcctaggaattacagtggaaggaccctcagaatccaaaatgtcttgtaaagacaacaag
gatggcagctgcagtgtggaatacactccctatgtcacaggggactatgatgtgaatatt
acatatgatggagagcatattccaggcagcccattcagagtaccagtgaaagatgttgtg
gatcccagcaaggtcaagatatctggccctgggctgggaacagcggtacgagcaaaaatc
cctcagcagtttacagtagataccagcaaagctggcattgcgcccctggcagtgcaagtg
acaggaccaagagggacggtggaaccggtagacctggtggataatggagacgggactcac
acagtcagttacacgcccacgctggagggcccctacaccgtagctgttcagtatgcagat
gaagagatcccgcgaagtccctttaaggtaaaggtcttgccaacgtacgatgccagcaag
gtgactgccagtggtcctggcctctgcgctcaaggaatttccgccagcctcccagttaat
tttgctgtagatgccaagaatgccggactgggacccctgtcggtccaaatcacggatcaa
gaagggaagccaaagaaagcgcagattcaggacaacaacgatggcacctattctgtgtct
tacatcccggacaggactgggcgataccacgttgctgtcaaatatggaggagatgacatc
ccttactccccgtacagaatccgcgccatgtccataggagatgccagcaagtgcactgta
gcaggtcctggtatccaggcagcagtaaaaactggcgaagaggttggttttgtagtagat
gccacaactgccggcaaagggaaagtcacgtgcagcatccttggcccagatggtttggag
aatgaagcagatgtgattgagaatgtggacggcacttatgacatttactacactacagct
aaaacgggaccgtacgtcatccatgttcgctttggcggagccgacatccccaatagcccc
ttcactgtgatggctacagatgaagtccccgtacaggtgcagcagcagtcccttagtgca
tgtcctccaggctaccagcccttggtatcggagacagattatgctcaggtcggctcaatg
aatggcttgagtttccggccctttgatttggttattccatttgccataaggacaggagag
ataacaggggacgttcacatgccttctgggaagaccgcccccgcagatatagttgacaac
aaagatggcactgtgtctattcgatacgttcccacagaaactggcctgcacgagttggcc
attaaatgtaatggagctcatatcccagaaagcccactgcagttctttgtgaattatcca
aacacaggaagtgtctctgcctatggcccaggcctaatatatggggtggctaataagcca
gccacattcaccattataaccgaggatgctggagaaggaggcctggatctggcaatagaa
gggccgtccaaggcagagatcagctgcatcgataacaaagatggcacttgcactgtaacg
tatctgcccaccctcccaggggattataacattcttgtgaaatataatgacacacacatc
gctggaagccctttcattgctaaaatcacagatgacagcaggcggcgctcacaagtgaaa
ctcggttccacagcagacttcctattggatatcactgagactgatctgagccttctgtct
gccagtatcaaagccccatctggtcgggatgagccctgtctactgaaaaggcttccaaac
aatcatattggaatctcctttatccctcgggaagttggggagcacttagtcagcattaag
aaaaatggccgccacatacccaacagtcctatatccatcatggtttaccagtcagaaata
ggggacgccagcaaggtgaaagcctttgggcctggtctgattgaagggcgaacgtatgag
atgtcggatttcattgtggacaccagagaggcaggctacggggggctgtcgctggcagtg
gaaggacccagtaaagtagacatccagacagaggacctagaggacggcacttgtcaggtc
tcctattgtccgacagaaccaggagtttacattgtgtccatcaagtttgcagatgagcac
gtgccaggaagcccattcacagccaaagtgatgggagagggaagagtgaaggagagcatc
acacgcaggaggaaggcaccatctgtggcctcagtgggtgggctttgtgagctcaacctg
aaaataccagaaattgacaggaatgaactcacagcagaggttgtcagcccatctgggagg
aaacaagaagcagagattgttgacctgggacagaacacgtcgtgtgtgcgttttgtgccg
caagagacagggatccacaccgtgagcgtaaaatacagaggggagcacgtgccggggagc
ccattccagttcactgtgggacccctgggagaaggtggagctgagaaagtgaaggctgga
ggccctgggttggaaagaggagaggctggagttccagctgaattcagcatatggacccgc
gaagctggtgccggaggcctctccattgctgtggaaggcccgagcaaagcagaaatttca
tttgaagaccggaaagatggctcttctggggtgtcctatgtagtacaagagcccggtgac
tacgacgtgatcatcaagttcaacgatgaacatattccccagagcccgttcctagttccc
atcgttgccacgtcggacgatgcccgccggctcactgtcaccagccttcaggagtctgga
ttaaaggttaatcagccagcatcctttgccatacggcttaatggcgccaggggcaagatt
gatgccaaggtgcacagtccgtctggggcagtggaggaatgctttgtgactgaactggaa
ccagataagtacgccgtacgctttatgccacgggagaacgggatccacatgattgatgtc
aagtttaatgggagccacgttccagggagtccatttaaggtgcgagttggcgaggcggga
caggaaggagacccaggcctagttacagcctacggagacggactggagaccggtaccacg
ggcaaacaatcggagtttatcattaatacaagcaaagccggaccaggggccctgtcagtg
acaattgaggggccgtccaaggtaacgatggagtgcaaggaatgcccagaaggatacaga
gttctctacacgccaatggcgccaggaatttacatgataggagtgaaatacggcgggccc
aaccacattgtcggcagccctttcaaggccaaggtcacaggtcagcgccttgtgggtatt
gggggtaccagcgagacctcctctatcatcgtccagtctgtgacccgggcttccaccgag
accacctacagcgctttgccgagatttgcatcagacgccaccaaagtgacatccaaaggg
gccggcctgtctaaagctttcctggggcagaagagcacttttaccgtggattgcagtaaa
gcaggttccaacatcctattggtgggtgtccatggccccaccctcccctgcgaggaggtc
tctatcaagcacctggggaacaagcactacactgtccattaccacgtgaaggagagaggg
gattacatgctggtagtaaagtggggcgaggagcacattccggggagccccttccacatc
accgtcccgtaa
DBGET
integrated database retrieval system
