Xenopus tropicalis (tropical clawed frog): 100485218
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Entry
100485218 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF17.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100485218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485218
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100485218
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Paralog
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GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
Zn-ribbon_8
Zn_ribbon_SprT
zf-LYAR
zf-C2H2_11
C2CH-3rd_BIRD-IDD
LIM
zf-met
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
100485218
NCBI-ProteinID:
XP_002932933
UniProt:
A0A6I8QCW8
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Position
10:42563716..42566278
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AA seq
364 aa
AA seq
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MEEMEDKRSLGEAASTQDLSCRDHSSCVQKPLAEPSYSMGPCLPDNHPYDSREDTVSQPV
PPVYDSGLDWNTHVPDNLELLRCQIGDKAVHGRKYRPGHGPKKYVCLDCGKIFTHSSTLA
THQRTHTGEKPYGCTNCGKRFTRSSTLSTHQRIHTGERPYGCAECGKCFIQSSHLVLHQR
THTGDRPYECAQCGKSFSNSAHYVIHKRTHTGERPYSCVECGKSFSSKSYLATHKRLHAE
NTLFICNQCGKSLSNRITYASHVKTHNASKPFVCGECGRCFSRKLQLVLHKRVHTGERPF
VCEDCGKKYTRKSYLVVHRKTHMGDAQVCNECGETFMGKLELTAHRQSHFVTGTEKLPCT
AKDD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggaggataagcgatcccttggtgaagcagcatccacacaagacttatca
tgcagggaccatagtagctgtgtacagaagcctcttgcggagccatcttactctatgggg
ccctgtctcccagataaccatccgtacgactccagagaagacactgtatctcagccagtg
ccccctgtgtatgattccggcctggattggaacacccatgtaccagataacctagaactc
ttaagatgtcagattggggacaaggcagtgcatggcagaaagtacaggcctggtcatggg
cctaaaaaatatgtgtgtctggactgcggaaagattttcacacacagttctacgcttgct
acgcatcagaggacgcacactggtgagaaaccatatggctgcaccaactgtgggaagcgt
ttcacacgcagctcaacgttatccacacaccaacggattcacaccggagagcgaccatat
gggtgcgcagagtgtggtaagtgctttattcagagctcccacctcgtcctacaccaaagg
actcacactggtgatcgaccgtatgagtgtgcacagtgtggcaagtccttcagcaacagt
gcgcactatgtcattcacaaacggacgcacactggcgagcggccctactcctgtgtggaa
tgtggaaagagtttcagcagcaagtcctatctggccacgcacaagagacttcatgccgaa
aacaccctcttcatctgcaaccaatgcggcaaaagcctgagcaatcgcataacgtacgcc
agccatgtaaaaacacacaatgcaagcaagccttttgtgtgtggtgaatgcggcaggtgc
ttcagtcgcaagctacagctcgttctgcacaagagggtccataccggagagaggcctttc
gtatgtgaagactgcgggaaaaaatacacccgcaaatcctaccttgtagtacacaggaaa
acccacatgggtgatgcgcaagtgtgcaatgaatgcggtgagactttcatgggaaagctc
gaactcacagcacatcggcaaagccactttgtaactggcaccgagaaactgccatgcaca
gccaaagatgactga
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integrated database retrieval system
