Xenopus tropicalis (tropical clawed frog): 100485340
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Entry
100485340 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100485340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485340
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100485340
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GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
C2CH-3rd_BIRD-IDD
KRAB
zf-C2H2_6
zf-met
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
100485340
NCBI-ProteinID:
XP_031748890
UniProt:
A0A7D9NM01
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Position
9:3673495..3677646
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AA seq
554 aa
AA seq
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MGMWEEASDPVMGKKDKNEERKERILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPG
SVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKALYREGIKEEE
EEPQQLRPLAACEYKDGSDVTAHTEATLCCNNDGNLTHPDVSPAEQPPPANGIKEEAASW
EGGNQSDCSINPLTEQIQGTDSPTPILGCSLNILEMKGNNYDKNSHQSPHQSEITKNTLH
RKYSCNECQKHFNSNRDFNKHQRTHTGEKPFSCSECGKCFPSKFQLARHERTHTGEKPFS
CSECPKCFTNKYQLHRHQRTHTGEKPFSCSECGKCFPIKFQLDRHERTHSGEKPFSCSEC
PKCFTNKCQLDRHQRTHTGVKPFSCSECGKCFSDQSLLKVHHRIHTGVKLFPCSECGKCF
SYRSNLNRHQRTHTGEKPFSCSECGKCFSDQSYLKIHYKTHTREKPFSCSECGKCFSDQS
DLKIHYKTHTGEKVFPCSECGKCFSRQSTLNRHQRNHTGEKPFSCSECGRCFSQQSDLKV
HYRTHTGEKPFSCS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtgggaggaagcgagtgacccagtgatggggaagaaggataaaaatgaggag
cggaaggagagaatcctgaatctcacactggagattatctatctgctgactggagagggc
tacgtcatccctaagaagaagagcccaactgtgggtttgggggccctgcatgcccctggc
tccgtcatacagaaggaaaatgacaagaagatcctggaactcatctccaacatcatccag
ctgctgactggagaggttgccataaggtgtgaggatgtttccatctatttttccttggag
gagtgggagtatataaaaggaaacaaggccctttacagggaagggataaaggaggaggag
gaggagccccagcagctccgcccactggcagcctgtgagtataaagatgggagcgatgtt
acagcacatacggaagcaactttatgttgtaataatgatgggaatctcacacaccctgat
gtttctccagcggaacagcccccaccggccaatgggattaaagaggaggcggcttcatgg
gaagggggaaaccaatcagattgcagcattaatccccttacagaacagatacagggaaca
gactcacctactcctatcctggggtgcagcctgaatatcttagaaatgaagggtaataat
tatgataaaaattcccaccaatctccacatcaatctgaaataacaaaaaatacattacat
aggaaatacagctgcaatgagtgtcagaaacattttaattctaatagagactttaataaa
catcagagaactcacacaggggagaaacctttttcttgttcagaatgtgggaaatgtttt
ccaagcaaatttcaacttgctcggcatgaaaggacccacactggggagaaaccattttct
tgttctgaatgtccaaaatgttttaccaacaaatatcaacttcatcggcatcaaaggact
cacacaggggagaaacctttttcttgttcagaatgtgggaaatgttttccaatcaaattt
caacttgatcggcatgaaaggacccactctggggagaaaccattttcttgctctgaatgt
ccaaaatgttttaccaacaaatgtcaacttgatcggcatcaaaggactcacacaggggtg
aaaccattttcttgttctgaatgtgggaaatgtttttcagaccaatcactccttaaagtt
catcatagaatccatacaggagtgaaactatttccttgttcagaatgtgggaaatgtttt
tcctatcgatctaaccttaatcggcatcaaagaactcacacaggggagaaaccattttct
tgttctgaatgtgggaaatgtttttcagaccaatcctacctgaaaattcattataaaacc
cacacaagggagaaaccattttcttgttctgaatgtgggaaatgtttttcagaccaatcc
gacttgaaaattcattataaaacccacacaggggagaaagtatttccttgttcagaatgt
gggaaatgtttttcccgtcaatctactcttaatcggcatcaaaggaatcacacaggggag
aaaccattttcatgttctgaatgtgggagatgtttttcacaacaatcggacctaaaagtt
cattatagaacccacacaggggagaaaccattttcatgttcttaa
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