Xenopus tropicalis (tropical clawed frog): 100485504
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Entry
100485504 CDS
T01011
Symbol
nectin1l2.1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03266
Virion - Herpesvirus
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100485504 (nectin1l2.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100485504 (nectin1l2.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100485504 (nectin1l2.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100485504 (nectin1l2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100485504 (nectin1l2.1)
04090 CD molecules [BR:
xtr04090
]
100485504 (nectin1l2.1)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
100485504 (nectin1l2.1)
CD molecules [BR:
xtr04090
]
Proteins
100485504 (nectin1l2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
C2-set_2
I-set
Ig_2
Ig_4
SpoIIIAH
Motif
Other DBs
NCBI-GeneID:
100485504
NCBI-ProteinID:
XP_002940964
UniProt:
A0A8J0QSL9
LinkDB
All DBs
Position
2:7482823..7499681
Genome browser
AA seq
483 aa
AA seq
DB search
MRLRYRSWIVLLLVTLGGNAQVSVIVDREVNAKLGSDTKLYCEVKTPDIISQVTWQRKLS
PNNENFMTYSKGEEPMHLTPFGQRVKFLGNGDLGGSILIPNVTLADQGTYLCIFTTFPGG
TKEGEIHLSIWVEPSVEVQLNPVLSGPNPDIIAECVAFASKPAANISWDTYGLPHSSTET
PVQHSNGTVSVRSQLWMVPSPGLNGHQATCLVSLPEQMYEKLIHMNITNIQYAPQTVHVT
VRRVKDDPPYIECWADGNPTVTYAWRRGNRSITDDEAQVTGNTLYFPRGNTDNNGLYVCE
ATNSIGRNSKSVYLYKYSDATPNCHTGIWITVILLVALVISATGYYYIRKQRNHFCREED
DDEDDGQTGCGLQVLEEERQTGSGTQVLEEEQQTGSGTQVLEEEQQTGSGTQVLEEEQQT
GSGTQVLEEEQQTGSGTQVLEEEGQTGSGTQVLEEERQTGSGTQVLEEPEHFADAQSNLV
RYG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaggtaccgcagttggatcgttctgctcctggttacactcggcgggaatgcg
caggtctcggtgatcgtcgatagagaggtaaatgccaagttggggtcggacaccaagtta
tactgcgaagtgaaaacccccgacattatctcccaagtcacttggcagaggaagttgtcg
cccaacaatgagaatttcatgacctacagcaaaggagaggaacccatgcacctgactccg
tttgggcagagagtgaaatttctgggcaacggggatctgggaggctccatactgattccc
aatgtaaccctggccgaccagggcacctacctctgtatcttcaccacatttcccggaggc
acaaaggaaggagagattcatttatccatctgggtggagccgtcggtggaagtgcagcta
aatccagtgctgtcggggccaaatccggatattattgctgaatgtgtagcctttgcctcc
aaacccgcagccaatatcagctgggatacatacggcctcccccactcttccactgaaacc
ccagtacagcattctaatgggacggtgtcggtacggagccagctatggatggtgccttct
cctgggcttaatgggcatcaggcaacttgtctggtttctctgcctgagcaaatgtatgag
aaactgatacatatgaacattacaaatattcagtacgcccctcagacagtgcatgtcaca
gtacgcagagtaaaggacgaccctccgtacattgagtgttgggcagatggcaaccctaca
gtcacctacgcgtggaggagggggaatagatccattactgatgatgaggcccaggttaca
gggaacactctgtattttcccagagggaatacggataataatggcctgtatgtctgtgag
gccacaaacagcattgggagaaactcaaagtcagtctatttatataaatactcagatgct
actcccaactgtcacacaggaatatggattacagtaattctacttgtagccttagtgatt
agcgccactgggtattactacataaggaagcagagaaatcatttttgcagggaagaagat
gacgacgaagatgatggacaaacaggttgtgggctgcaggtactggaagaagaacgacag
acaggttctgggacccaggtactggaagaagaacaacagacaggttctgggacccaggta
ctggaagaagaacaacagacaggttctgggacccaggtactggaagaagaacaacagaca
ggttctgggacccaggtactggaagaagaacaacagacaggttctgggacccaggtactg
gaagaagaaggacagacaggttctgggacccaggtactggaagaagaacgacagacaggt
tctgggacccaggtactggaagaaccagaacattttgcagatgctcagtcaaaccttgta
agatacggctga
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