Xenopus tropicalis (tropical clawed frog): 100485596
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Entry
100485596 CDS
T01011
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100485596 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100485596 (sart1)
04121 Ubiquitin system [BR:
xtr04121
]
100485596 (sart1)
Spliceosome [BR:
xtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100485596 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
100485596 (sart1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100485596 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
100485596
NCBI-ProteinID:
XP_004913756
Xenbase:
XB-GENE-1021787
UniProt:
A0A6I8PWL8
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All DBs
Position
4:38863155..38878124
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AA seq
766 aa
AA seq
DB search
MGSSKKHKEKDRDVSTASGGDERHREHKKHKHKERERERRKRSRERERERPREREGRSKS
SKESESRKIKKEKLDSVYEHTIAPKSAAGDSSLSIEETNKLRAKLGLKPLEVNTVKTESG
TKEDPVAASVINPIALKQQQELREKLAAAKEKRLLNQKLGKIKSLGDDELWLDDTAAWIE
KSRKLQMEKEIAEKRAKLLAEMDEEFGVSNLVEEEFGQKKHYSSRDLQGLTVEHKINAFK
EGQTVILTLKDKGVLDEDDADVLVNVNLVDKEKAEKNVELKKKKPEYKPYEEEENVEDMA
VFRPKSVLSKYDEEIEGEKKKSFQLESGGVADGSWEKELQNIRESLHSQAHTLELPQSKL
ASEYYTPEEMVSFKKTKRRVKKIRKREKVVRADDLLNINHDTRETDFGSRSRGRGRRRVE
DSDEENGIEEIDEILQSDDIRVESMVMSDQEDNDDSAAVIEEDELESELQKQLEKSRRLK
QIQQQKDSSDKVVALVKRVESQKGQDEEDDDDKKGSIVFNATSEFCRTLGEIPTYGLAGN
REDQEDLMDFEKDEADSENENGESDGEENIGWSMVNLDEEKNQHDYSASSTTILDEEPIV
NRGLGAALLLCKNKGLLETTVQKVARVKTPNKSLPSAVYCIEDKMAIDDKYSRREEYRGF
TQDFKEKEGYRPDVKIEYVDETGRKLCPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEA
LLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMTANTLIK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttctaaaaaacataaagagaaagatcgtgatgtttccactgcaagtggaggt
gatgaacgtcacagggagcacaagaagcataagcataaagaacgagagcgtgagagacgc
aagaggtcaagggaaagagaaagagaacggccacgagaaagggaaggcaggtccaagtca
agcaaagaatctgaatcacgaaagataaagaaggaaaaactagattctgtgtatgagcat
actattgctcccaaatctgctgctggagattcatcattgagtattgaggagaccaataaa
cttcgtgctaaacttggtctaaaacctctggaagtaaatacagttaaaactgagagcggc
actaaagaagatcctgtagctgcttctgtcattaatcctattgcactaaaacagcaacaa
gaacttagagagaagttagctgctgcaaaagagaagagattgctgaatcagaaattaggt
aaaatcaaatctctgggagatgatgagctatggttagatgacacagctgcctggattgaa
aaaagccgtaagcttcagatggaaaaggaaatagctgagaagagggcaaaacttcttgct
gaaatggacgaagagtttggcgtttctaatcttgtggaagaagaatttggtcaaaagaag
cattacagttcccgtgatcttcagggactcactgtggaacacaaaattaatgctttcaaa
gaaggacagactgtcattctcactttaaaggacaaaggtgtcttagatgaagatgacgca
gatgttctagttaatgtaaacttagtggataaagagaaggctgagaaaaatgtggagttg
aagaagaaaaagcctgaatacaaaccatatgaagaggaggaaaatgtggaggacatggca
gttttccgccccaaatcagttctttccaagtatgatgaggagatagagggagagaagaaa
aagtcatttcaactggagtctggaggagttgctgatgggtcctgggagaaggaactacag
aatattcgggaatctttgcacagccaagctcatactctggaacttccacaatctaaactt
gcttcggagtactacactcccgaggagatggtctcctttaaaaaaacaaagcgacgagtg
aaaaagattcgtaagagagagaaggttgttcgggctgatgaccttctaaacattaatcat
gataccagagaaactgactttggatcaagatcaagggggcgtgggcgtaggcgtgtagag
gattcagacgaggagaacgggatagaagaaatagatgaaatactgcagtctgatgatatt
cgagtggaaagcatggttatgagtgaccaggaagacaatgatgactctgcagcagttata
gaggaagatgaacttgaaagtgaattacaaaaacagttggagaaaagcagaagattaaaa
caaattcagcaacaaaaagacagcagtgataaggttgttgcattggtcaaaagggtggag
tctcagaaaggtcaggacgaagaagatgacgatgataagaaaggttcaattgtattcaat
gcaacttctgaattctgcaggacccttggggaaatcccaacatatggacttgcaggaaac
agggaggatcaggaggatctcatggactttgaaaaggatgaagcagattctgaaaatgag
aatggagagtctgatggggaagagaacattggttggagcatggtgaaccttgatgaagag
aagaatcagcacgattattctgcctcttccactaccattttggatgaagaacctattgtg
aaccgaggtttgggtgctgctctacttttgtgtaagaataaaggattgctggagacaact
gtacaaaaagtggctcgtgtaaagactcctaataagtccctcccatctgctgtatactgt
atagaggataaaatggcaatagatgataaatacagcagaagagaagagtaccggggcttc
acacaagatttcaaagagaaggaaggctatagacccgatgttaagatcgagtatgttgat
gagactggacgcaaactctgtcccaaggaggccttccggcagctgtctcatcgtttccac
ggaaagggatctggcaagatgaaaaccgaaaggcgcatgaagaagttggatgaagaagct
ctcctgaaaaagatgagctcaagtgacactccgttaggtactgtcgccctgcttcaggag
aagcaaaaggcccagaagactccttacattgtacttagtgggagtgggaaaagcatgaca
gcgaatacgctcatcaagtaa
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