Xenopus tropicalis (tropical clawed frog): 100485631
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Entry
100485631 CDS
T01011
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100485631 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485631 (srebf1)
04131 Membrane trafficking [BR:
xtr04131
]
100485631 (srebf1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100485631 (srebf1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100485631 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100485631 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
100485631
NCBI-ProteinID:
XP_002935886
Xenbase:
XB-GENE-987572
UniProt:
A0A6I8R5C1
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All DBs
Position
9:15371966..15393817
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AA seq
1211 aa
AA seq
DB search
MASLGYDDSSLEELDPSLSLQETSDIDSMLLNDIDDMLQLIHNTDNDFLFDGVAFNTING
PAQDPTPPVDLAGGEALSSLEGLLAAPPSAPPVKMFSLGFPGQQSSVLPQDALGQQISPP
AQNRANEEPMQICSSPNQASNQLQQPSQPLQSLVFGQKFVSQAQPQFSSQTPLGAYQQDQ
GTYTVPQSVSSPQGIINQPIQNGAGQARQQNLQPVPSPAMQPLQNTVQGGQVLQNITGQT
LQHVAVQGVQQLQSVAGQPLQSITSVAGPHLQSISALPQQAQSPTQIQQPVTIHTQSISP
QQFITTTSPITSQIQQVPVLLQPHFIKTDSLVLTAVKTDNAVVSGVKTSGMTSLGTNTTI
QTTPLQMPALVSGGTFLTTVPLVMDADKLPINRIAATGKMAMLNGKGEKRTAHNAIEKRY
RSSINDKIIELKDLVVGNEAKLNKSAVLKKAIDYIRFLQQNNIKLKQENMMLKMAAQKNN
TLKDLVAGTGVMDGMKAEMMEVLTPPPSDAGSPSHSGSPLSQCNSDSEPDSPLSEDAKVE
VKQEVPSPRSAGMLDRSRMALCAFVFLCLSFNPLSFLMGSSKSYDSLDSGSFHGTGRITL
EVGSSEVSDWSSWLAPSTFLWPINIIIVLGVFIRLFIYGEPVTRLHSESSALFWCHRKQA
DVDLSRGDFAQASLHLWMALKALGRPLPTSNLDLCCSLMWSVIRYVLQRLWVGRWLAARA
GGFRRDHQLKDDVRKSCRDAALVYHRLHQLHMTGKHVGGHLSAVNMALSAVNLADCAGNA
ISVATLAEIYVGAALRVKASLHRRFHFLARFFLSSARQVCLAQSVTIPPAMQWLCHPLGH
RFFVDGDWTVRSSPRDTIYSTAGSTVDPLAQVTQAFREHLLEKALYCVAQPEQTKPMTEG
EGEFSDALEYLQLLNGCSDTAAIPNHTFSISSSMAAVTGTDPVAKWWASLIIVAINWLQG
DDEAAQRLYPVVEYMPKTLYASENPLPKAALYVFKAVRTLLGKQDSSQVSLGHCEKASGY
LRDSLNMGPSGTSSVDKVAQLLLCDLLLVTRTNIWQQQQNSPGQQPSLVHPAPPHELRGF
QLDLSSLRRLAQSFRPAMRRVFLHEATARLMAGASPTRTHQLLDRSLRRRVAPSSKEAGT
QEMSPTPREHAEALLLACRYLPPTFLSAPGQRVGMLAEAARTLEKLGDKRTLQDCQQIIL
ALGSGTTVTSS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctggggtacgatgacagctctctggaggagttggacccttctctgtccctc
caggagaccagtgacattgactccatgctgctgaatgacattgatgatatgcttcagctt
attcacaacactgacaatgacttcctgttcgatggagttgcctttaacaccatcaatggt
cctgcgcaggacccaactccacctgtcgatctcgctggaggagaagctttaagctctttg
gagggattactggcagctccccccagtgcgccccctgtgaagatgttttctcttggtttt
ccggggcagcagtcttctgtccttccccaggatgcactggggcagcagatcagtcctcct
gcacagaaccgggcgaatgaggaacctatgcagatctgttcaagtccaaatcaagcgtcg
aaccagcttcaacagccttcacaaccgctgcagagcctggtgtttgggcagaaatttgtg
tcccaagctcaaccccagttcagctcacagacgccattaggagcatatcagcaggatcag
gggacgtatacagtccctcagagtgtctcaagcccacaaggtattatcaatcagccaata
cagaatggcgctgggcaagcccgacaacagaacctgcagcctgtcccaagcccagccatg
cagccgctgcagaacactgtgcaaggcggacaggtgttacagaatatcacagggcagact
ctgcagcatgttgcggtacaaggggtgcaacagttgcagagtgtcgctgggcagccgttg
cagagcataacaagtgttgcaggaccacatctgcaaagcatcagcgccctgcctcagcag
gcacaatcccccactcagatacagcagcctgttaccatccacacgcagagcatctcgccg
cagcagtttatcactaccacttcacccatcacctcccaaatccaacaggtcccggttctt
ttgcaacctcatttcatcaaaacggactcccttgtgctcactgctgtaaagacggacaac
gctgttgtgtcaggagtgaagacttctgggatgacttcattagggaccaataccacaata
cagactacaccgctgcaaatgccggctctggttagtgggggtacctttctgacaacagtg
ccgttggtcatggatgcagacaagttgcctattaaccgtatcgcagccaccggcaagatg
gccatgctgaacggcaaaggggaaaaacgcacagcacacaatgccatcgagaagcggtac
cgatcctctatcaacgacaagatcatagaactaaaggacctggttgtgggcaacgaagcc
aagctgaacaagtcggctgtgttgaagaaggccatagactacatccgtttcctgcagcag
aacaacatcaagctgaaacaggaaaacatgatgctgaaaatggccgcccagaagaacaat
accctgaaagacttggtggctggcactggagttatggatggcatgaaagcagaaatgatg
gaagtgctcacccctcctccctcagatgcagggtctccatcacatagcggcagtcctctc
tcccagtgcaacagcgactcagagccagacagtcctctcagtgaggatgctaaggtcgaa
gtcaaacaggaggttccatctcctcgcagcgcagggatgttggatcgttcccgaatggca
ctctgtgcttttgtgttcctctgcctctcgttcaaccccctgtctttcctgatgggaagc
tccaagagctacgactctttggacagtggatctttccatggcaccgggagaatcacattg
gaggtcggatcctcagaagtatccgattggtctagctggctggccccttccacgttcctt
tggccaatcaacatcatcatcgtcctgggggtatttatacgactctttatttatggggag
cctgtaacaagactgcactcggaatcttctgccctattctggtgtcaccgcaaacaagcc
gatgttgatctgtctcggggtgacttcgcacaggcatcgctacacctttggatggcactt
aaagcactgggccgacccttgcccacctccaacctggatctgtgctgcagtctcatgtgg
agtgtgattcgctatgtcctccagcgcctgtgggtggggcgttggctggctgcgcgggca
ggaggcttccggagagaccaccagctgaaagatgatgtgaggaaaagctgcagggatgct
gctcttgtgtatcatcgcctccaccagcttcatatgactgggaagcacgttggaggtcac
ctgtctgctgtaaatatggcactgagcgcagtgaacctggcagactgcgctggaaacgcc
atctcagtagcgacactggcagaaatctacgtgggggccgccctgagagtcaaggccagc
ctgcaccgacgcttccactttttggcgcgctttttcttgtccagcgcccgtcaggtgtgc
ctggcacagagcgtcactatcccccccgccatgcagtggctgtgccaccctttgggacat
cgtttttttgtggatggagactggactgtaaggagctctccccgggacacaatctacagc
acagctggcagcacagtggaccccttggcccaggtgacccaagcttttcgggaacacctc
ctggagaaggcgctgtactgtgtggctcagccggaacagaccaagcctatgactgaggga
gagggggagttttctgatgctcttgaatatctgcagttgctgaacggatgctcagacaca
gcggccattcctaatcacacgttttccatcagttctagtatggcggcagtcacagggaca
gacccggttgccaagtggtgggcctctctcatcattgtggctattaactggctgcagggt
gatgacgaagcagcgcagagactgtacccagtggtggaatacatgccgaagacactatat
gcttcagagaatccactgcccaaagccgccctttatgttttcaaagccgttcgcaccttg
ttgggaaagcaagacagcagtcaggtcagcttgggccactgcgagaaggcaagcggctac
ctgcgagacagcttgaacatgggcccatctggcactagcagtgtggataaggtagcgcaa
cttctcctctgtgacctactactggtgacaaggacaaacatctggcagcagcagcagaat
tcccccgggcagcagcccagtctagtgcatccagcgcctcctcacgagctgcggggattc
cagctggatttaagcagcctccgcagattggcgcagtccttcaggccggccatgcgcagg
gtatttctgcatgaagccacagctcggctaatggccggcgctagccccacgcggacacat
cagctgctggaccgcagtttgcgcaggagagtggccccatccagcaaagaagcaggcacc
caagagatgagccccacaccccgggagcatgcagaagccctgctccttgcctgccgctac
ctgccccctacctttctatctgccccagggcagagagtgggcatgttggccgaggcagcc
cgtaccctggagaagcttggggacaaacggactctgcaggactgccagcagattatcctg
gcgctgggcagcggaaccacagtaacttccagctag
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