Xenopus tropicalis (tropical clawed frog): 100485633
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Entry
100485633 CDS
T01011
Symbol
cdh3
Name
(RefSeq) blastomere cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04371
Apelin signaling pathway
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100485633 (cdh3)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100485633 (cdh3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100485633 (cdh3)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100485633 (cdh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100485633 (cdh3)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100485633 (cdh3)
04090 CD molecules [BR:
xtr04090
]
100485633 (cdh3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100485633 (cdh3)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Major cadherins
100485633 (cdh3)
CD molecules [BR:
xtr04090
]
Proteins
100485633 (cdh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
BACON_2
Motif
Other DBs
NCBI-GeneID:
100485633
NCBI-ProteinID:
XP_002936044
UniProt:
A0A6I8SJT4
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All DBs
Position
4:complement(61496000..61526477)
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AA seq
881 aa
AA seq
DB search
MGGTRLGNPNVWVCGLLCLLQVVPSINVDVSGCQPGFSSADYTFSVNRRELERGRKLGKV
NFVDCTTRKHGLFDVGDSRFRVLPDGTVLVKRHVKLHSKDTKFIVSTWDARGIKHSTNIA
VVNKRHRSGEESHRRSSELPVLTFPEKRTGLKRKKRDWVIPPIKVSENERGPFPKRLVQI
KSNKERVTKVFYSITGQGADTPPEGVFRIEKETGWMLVSRPLDREEYDKYVLLSHAVSEN
GASVEEPMEITVYVIDQNDNRPKFTQEVFRGSVREGVQPGTRVMAVSATDDDDGIETLNG
VISYSILKQDPEQPTPNLFTINRETGVISLIGTGLDREKFPEYILTVQAADLDGAGLSTE
GKAIIEITDANDNAPIFDPKTYTALVPESEVGFEVQRLSVTDLDQPGTAAWQAVYKIRVN
EGGFFNITTDPDSNQGILTTAKGLDFEQRKQYVLQITVENAEPFSVPLPTSTATVTVMVE
DVNEAPFFVPVVSKIDVSEDLTRGQQIVSLVAQDPDKQQKQKLSYVIGNDPARWLTVNKD
TGIVTGNGNLDRESEYVKNNTYSVIMLVTDDGVPVGTGTGTLILHVLDVNDNGPVPSPRV
FTMCDQNPEPQVLTITDADIPPNTYPYNVSLSHGSDLIWKAELDSKGTSMRLSPTQQLKK
GDYSIYVLLSDAQNNQQLTVVNATVCNCEGKAIKCQEKLVGGFDLPIILVILGSVLALLI
LFLLLLLFLKRKKVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYDLSQLHRGLDSRPDI
MRNDVVPTLISAPHYRARPSNPDEIGNFIEENLDAADNDPTAPPYDSLLVFDYEGSGSEA
ASLSSLNSSNSNDEHNYNYLNDWGPRFRKLADMYGGDDDDE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaccaggctcggaaacccgaacgtttgggtgtgcgggctgctttgcttgtta
caggttgtgccttccataaatgtggatgtttctggatgccagcctggattttcctctgca
gactacactttttctgtaaaccgtagggagctggagaggggcagaaagcttggcaaagtg
aactttgtcgactgtacaacccgcaaacatggtttgtttgatgtgggagattcacgattc
agggtgctgccggatggtactgttctagtaaaacgccatgtgaaactgcacagcaaggac
accaaatttatagtcagtacatgggatgcgcgtggcattaagcactctactaacattgct
gttgtgaacaaacgccatcgatccggagaggaatctcacaggaggtcttcagagctgccg
gtgctgacttttccagagaagcgcactggtctgaaaaggaagaagagagactgggtcatc
cctcctattaaggtttctgagaatgaacgtggccctttccccaaacgtcttgtgcagatt
aaatcaaacaaagagagggtaactaaggttttctacagtattactgggcaaggggcagac
acccctcctgaaggagtgtttcgtatagagaaggaaacaggatggatgctggtttcccgg
cctttggatcgtgaagagtatgataaatatgtgctgctttctcatgctgtatctgagaat
ggtgcttctgtggaagagccgatggaaataacggtctacgtgattgatcaaaatgataac
cgtcccaagttcacacaagaggtgttcagaggatctgtcagggagggtgtgcagccaggc
acgcgggtgatggctgtatctgcaacagatgatgatgatggtatagaaaccctgaatggt
gtcatttcctattcaattctgaagcaggatcctgagcaaccaactcctaatttgtttacg
ataaaccgagaaactggagtaattagcttgattgggacgggtttggacagagagaaattt
ccagaatacatacttactgtgcaagctgccgatctggatggtgcaggactgagtacggag
gggaaagctattatagagatcaccgacgcaaacgacaatgctccaatttttgatccaaaa
acttatacagcactggtcccagagagtgaagttggttttgaagttcagagactgtctgtt
acagacttggatcagcctggaactgctgcatggcaggcagtctacaagattagggttaat
gaaggagggttttttaatattaccacggatccagactctaatcaaggaatactaacaact
gctaagggtcttgattttgagcagaggaagcagtatgtgctacaaatcactgtagaaaat
gctgaacctttctctgttccgctaccaacctctactgctactgtaactgtgatggtggag
gatgtcaatgaagccccgttctttgtgccagttgtcagcaaaatagatgtttctgaggac
cttacacgtggccagcaaattgtttctcttgtagcccaggaccctgataagcaacagaaa
caaaagttaagctatgtcattggcaatgacccagctcgctggcttactgtaaataaggac
actggcattgtcactggaaatggcaacttggatcgtgagtcggagtatgtcaagaacaat
acatattcagtcatcatgctggtaacagatgatggtgttccagttggcactggcaccggg
acactcattctgcatgtgctggatgtcaatgacaacggccctgttcccagccctcgagtc
ttcaccatgtgtgatcagaatcctgagccccaagtattaacaatcactgatgctgacatc
cctccaaacacctacccgtacaacgtttcactttcgcatggctctgatttaatatggaag
gctgaacttgacagtaaaggaacatcaatgcgtctcagtccaactcagcagctgaagaaa
ggagattacagcatttatgtgcttctgtctgatgcgcaaaataatcagcagctgactgtg
gtgaacgctacagtgtgcaactgtgagggaaaagcaataaaatgccaggaaaaacttgtt
ggcggttttgatctgccgattatccttgtgatcttgggctcggtcttggctctgttaatc
ctattcttgctgctacttctgttcctgaagagaaagaaggttgtgaaggagccactgctt
ttgccagaggatgataccagggacaatatattctattatggagaggaaggtggtggggag
gaagaccaggattatgacttgagccagctgcacagaggcctagattcccgtccagacata
atgaggaatgatgtggtccccacactgatatctgctccgcattacagagctcggccttca
aacccggatgaaattggtaacttcattgaagagaacttggatgcagctgacaatgacccc
actgctcccccatatgattctcttttagtgtttgattatgaaggcagtggctccgaggcc
gcatcgctcagctcactgaactcttccaactcaaatgatgaacataattacaactatctg
aatgactggggccctcgcttcagaaagttagcagatatgtatggtggagatgatgatgac
gagtag
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