Xenopus tropicalis (tropical clawed frog): 100485660
Help
Entry
100485660 CDS
T01011
Symbol
cat1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6 isoform X1
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100485660 (cat1)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100485660 (cat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
DUF6574
Motif
Other DBs
NCBI-GeneID:
100485660
NCBI-ProteinID:
XP_031761418
Xenbase:
XB-GENE-6453137
UniProt:
A0A803K330
LinkDB
All DBs
Position
7:complement(140112..169017)
Genome browser
AA seq
703 aa
AA seq
DB search
MMKMLPFGASWNQEEESRTDLLRLKSVHEMPLFLAAKENDVGRLQELLGSNQCYSSQRGA
SGETALHVAAGYDNLRAAETLLTADPSLVNVPMTSQLYQGQTALHIAAVNQNMNLVRILI
DKGADVSSPRATGSFFSLKATNLFYFGEHILSFAASVGNADIVKLLVEKGADVRAQDSWG
NTVLHILVLQPNKAMACQMFDLLTSLECGQRWPPLNQMVNHQGLTPLKLAAAEGNVMMFQ
YLMQKGVRKVPSMGPLYYTLYDMTEIDSWGSPCSVLHLLVSSRKSEARKILDISPVKELV
NEKWQSFGRPYFLLLGAIYVLYMICVSLCCANRRLVPITGNATSPRDITLLKQAPLLASY
ISPADELRLVGELITVIGALGMLLLEIPVLMGAQSISFFKDPVSGGPFHLILVLYSCMVL
ATLALRLTDSDGEIIPMSLALVFGWCYIMFFARGFQMTGPFTVMIHKIIFGDVLRFFWLM
MVVILGFGTALFVVFQTEDPTQMGVFYNYPMSLYSTYQLLINVINSPANYAVNLPPMYSI
VYFPFTLIANLMMMNMLIGMMGDTHWRVAQERDELWRAQLAAITIMLEGKFPKWFWPRLG
VCGSKYGLGDRWYLCVKESQDPQKILFPPQKPQSPPQQQVSGKGKPSITITDMGNNQQLN
GSGAPIAQRRSSRGWQILRGATIDQLKGTSVFKRESHQEVFYI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaatgcttccgtttggggcttcttggaaccaagaggaagaatctaggactgac
ctgttacggctcaaaagtgttcatgagatgcccctgtttctggctgctaaagagaatgac
gttgggcgcctacaggagcttctgggttcaaaccagtgttattccagccagagaggggcc
tcgggcgagaccgctctccatgttgcagccggttatgacaacttgagagccgcagagact
ttgctgactgcagatcccagcttggtgaatgtgccaatgacatcacagctctatcaaggg
cagacggctctgcacattgcggctgtgaatcagaacatgaacctggtgaggattctcata
gacaaaggggccgatgtctcgtctccacgcgcaactggcagcttcttctccctaaaggct
acaaatctcttctactttggggaacacattctgagctttgcggcctcggtgggaaatgcc
gatattgtcaagttactggttgagaaaggagctgatgttcgtgcccaggactcttggggc
aacactgtcctacacatattagttctacagcccaacaaggccatggcctgccagatgttt
gatcttctcacatccctggagtgtgggcagcggtggcctcccttaaaccagatggtaaat
catcagggtctcaccccattaaaactggctgcggcggaggggaacgtcatgatgttccag
tacctgatgcagaagggagtccgtaaggtgccgtcgatgggtcccctttattatactctc
tacgatatgactgagattgattcttggggttccccatgctctgtcctccaccttctcgtc
tcttcaaggaagtcggaggctcgcaagatcctcgacatctctccagttaaggagctggta
aatgagaaatggcagagcttcgggcgcccgtatttcctgctcctcggcgccatttatgtt
ctgtacatgatctgcgtctctctgtgctgtgccaatcggcgcctcgtacccataacggga
aacgccaccagcccgcgggacatcacgctgctcaaacaagcgccgctcttggcgtcgtat
atctcccccgcggatgagctgcgcctggtgggggaactcatcacggttattggggcgctg
gggatgctgctgctggagatcccagtgttaatgggcgctcagagcatttctttctttaag
gacccagtttcaggggggccatttcaccttattctagttctgtattcctgcatggtcctg
gccactttggccctgagactcacagactctgatggagaaattatccctatgtcgctggct
ctggtgttcggatggtgctacattatgttctttgcacgtggctttcagatgactggaccc
tttactgtaatgatacacaagatcatatttggagacgttctgagatttttctggctgatg
atggtggttattcttggttttggaacagctttgtttgtggtgttccagacagaagatccc
acccagatgggggtattttacaattaccccatgtccctctatagcacataccaactactc
atcaatgtcatcaactcccctgccaactatgctgtgaacctgccccccatgtacagcatc
gtctactttccctttactctgattgcaaacctgatgatgatgaacatgctaatcggcatg
atgggcgacacccactggagggtggcacaggagcgggacgagctgtggagggcgcagctg
gcagctattaccatcatgctggaaggcaaattcccaaagtggttctggcctcgcctcggt
gtctgtggttctaagtatgggctgggggatcgctggtacctctgtgtaaaggaaagtcaa
gatccccagaagatcctgttcccaccccagaaaccccagtctccaccccaacagcaggta
tctgggaaaggaaaaccatcaataacaattacagatatgggaaataatcagcaattaaat
ggttctggggcaccgattgcccaaaggagatccagccgagggtggcagatcctacgcggt
gccactatcgaccaattaaagggcacatctgtgtttaaaagagaaagtcaccaggaagtc
ttctacatttag
DBGET
integrated database retrieval system
