Xenopus tropicalis (tropical clawed frog): 100485706
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Entry
100485706 CDS
T01011
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100485706
Pattern recognition receptors [BR:
xtr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100485706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
TIR_2
LRR_9
LRR_LRWD1
LRR_EndoS
LRR_NXF1-5
LRRNT
FTH
Motif
Other DBs
NCBI-GeneID:
100485706
NCBI-ProteinID:
XP_002942581
Xenbase:
XB-GENE-5905045
UniProt:
A0A803K4M1
LinkDB
All DBs
Position
3:complement(42115679..42122247)
Genome browser
AA seq
944 aa
AA seq
DB search
MGWLMLQFKMFSLFNCLVLFHLVTRGVSFAIKGCEVHRQYNLKVLCYNRDLTKVPAQLPE
LSFMLDLSHNIIKTINRTDFQNLTVLQNLNLSNNRIQYMENGAFGKLVALQLLNLTKNRI
GSLSSRTFEGLQNLSTLLLDNNNIVTLEPNTFLHLYNLKTISLSYNCFYKLKTLNPAFQI
GTLREINIANCSIQTFSTEDIVNVSASLRSVDASRNPFSVISFPMSILENLTNLDISLTQ
RPILWYVKEPCFLRGLKKLNIKENNIKPPAIIGIIKNLSCSSLEELNLSYLNLTDSDQLI
QELCLRHPKVQTLKLTGNQYTEFREDTFQNCTSVKVLDLSHNRLHSAPGSTFHHLASIRE
LSLANNSLTAIPDNFSFITSLQKLNLSYNHVKEVNLNNSFSNLKELDLSGNKMTFFLSSG
LGNWNLQDLNLRENYLLDISASFASSLPTLQRLTISKNKLSSLSTNTFQNVTFLKHLNLA
DNQIEVIDPGAFSGLDKLRTLIIGSNKITRNTLHNMTFQGLGSLLELQLFGNYLNYDSSN
YLDIVPFLPLKSLKMITLNSQGHNGMQNLPINFFEGLLALERIHAGNLALSSIDSRTFSY
TPQLRELDISENPIKILDPFLFRNVPHLTELHISKTRMESLDFLILSNLTHLKLLRAVDS
QLNSFTSQQGAALPSLRFLDLRNNPLTCICDNQWFIDWVHNDTKTQVLHFYEYTCAYPPV
ARNSKLSTFNLSSCRLDYSFIFFLTSTLFITTFIISATVWNFWRWHVIYAYYITLAFLYN
RRWQGKKQKCKYDAFISYNFHDEKWVFRQLVPNLEGRYNWRLCLHHRDFEPGKAIVDNIV
DSIYSSRKTICIISRHYLESEWCSKEIQLASFRLFEEHTDVLILLFLEQIPDHHLSPYHQ
IRKVIKKKTYLIWPQERNATSIFWYRVSQALQTEEREEDEKCLL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggttggctgatgctgcagtttaagatgttttcattatttaattgccttgtgctgttt
catttggttacaagaggggtctcgtttgcaattaaaggctgtgaagtgcataggcagtac
aatctgaaggttctctgctacaacagggatttaaccaaggtcccagcacagcttccagag
ttaagcttcatgctcgacctttcccataacattatcaagaccataaacaggacagacttc
cagaatcttacagtccttcaaaatctaaacctttcaaacaatcgcatccaatatatggag
aatggagcctttgggaaacttgttgctctgcaacttctcaaccttaccaaaaacaggatt
ggctctctgtccagccgcacgtttgaaggactgcaaaacctaagcacactgttactggat
aacaacaatattgttaccttagagcccaatacgtttctacatttgtacaaccttaaaact
atcagtctttcctacaactgtttttacaaactgaagactctgaaccctgcctttcagatc
gggaccctcagagagataaacatagcaaactgtagcatacaaacattttccactgaggac
atagtaaatgtttctgcttctcttcggtcagtcgatgcctccagaaatccattttcagtt
atcagtttcccaatgagtatcttagagaaccttactaacctagacatatctctcactcag
aggcccattttatggtacgttaaagaaccttgctttttgaggggactgaagaagctaaat
attaaagagaataatataaaaccaccggctataataggtataattaaaaatctgtcatgt
agctcccttgaagaacttaacctaagttacttaaacctaacggactctgaccaactaatc
caagaactatgccttagacacccgaaagttcaaacactcaaacttactggtaaccagtac
acagagttcagagaagatacatttcaaaactgtacttctgtaaaagtgttagatttatct
cacaacaggctgcattctgcgcctgggtctactttccaccatcttgcctctatcagagag
ctgtctctggccaataactcacttactgctatacctgataatttctcctttataacctcc
ttgcagaagctgaacctcagttacaaccatgttaaggaggtgaatctaaacaactctttc
agcaatttaaaggaacttgacttatctggaaacaaaatgacgttttttctttcctcggga
ctaggcaactggaacctacaagatttgaatctgagagaaaattaccttttggatatcagc
gcttcttttgcatccagtctgcccacgctgcagagactcaccattagcaagaataagcta
agctctctgtcaaccaatacttttcaaaatgtaaccttcctgaaacatctgaatcttgca
gacaatcagatagaggtgatagatcctggtgccttttctggtcttgacaagctgcgcacc
ttgataattggtagcaacaagataacaaggaacactctccacaatatgactttccaaggc
ttggggtcactccttgagctacagctttttggcaactatcttaattacgattcctcaaat
tatcttgatattgtgccattccttccattaaaatctttaaagatgatcactctaaacagt
caaggtcacaatggaatgcagaatttacctatcaacttctttgaaggtctgctggcattg
gaaaggattcatgcaggcaatttagccctgtctagcattgactcaagaacattttcatat
actccacaactgagagaacttgatatcagcgaaaatccaatcaagattcttgacccattt
ttgtttagaaatgtaccacatctcacagagctgcacatcagtaaaactcgcatggaatcg
ctggattttctcattctatcaaacttgactcacctgaagcttctccgcgcagtagatagc
cagctgaactcattcacttcacaacagggtgcggctttaccatctctgagattcttggac
ctgcgcaacaacccactgacctgcatctgtgacaaccagtggtttatagattgggttcac
aatgataccaagacccaagtccttcatttttatgagtacacgtgtgcttacccacctgtc
gcaaggaactccaaactgtctactttcaacctttcttcctgtaggttagactattccttt
attttctttcttacatcaaccctgttcataactacttttatcatttctgcaactgtgtgg
aatttttggagatggcatgtgatttatgcttactacattaccctggctttcctctataac
agaaggtggcaagggaagaaacaaaaatgtaagtatgatgctttcatatcatacaacttc
catgatgagaaatgggtcttcaggcaacttgttcctaatctagaagggagatataactgg
aggctttgtcttcatcacagagactttgaaccaggaaaagctatagttgataacatagtt
gatagcatctatagcagcaggaaaaccatctgtattatcagcaggcactatttagagagt
gaatggtgttccaaagaaatccagttggccagtttccgcctctttgaggaacatacagat
gttctgattctgttgttcctggaacaaattcccgatcaccacttatccccctaccaccag
ataaggaaagttataaaaaagaagacatacttaatatggccacaggagagaaatgctacc
agcatcttctggtatagggtgagtcaggcattgcagactgaagaaagagaagaggatgaa
aaatgtctgctgtag
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