Xenopus tropicalis (tropical clawed frog): 100485847
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Entry
100485847 CDS
T01011
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100485847 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100485847 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100485847 (itgb4)
04810 Regulation of actin cytoskeleton
100485847 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100485847 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100485847 (itgb4)
04515 Cell adhesion molecules [BR:
xtr04515
]
100485847 (itgb4)
04090 CD molecules [BR:
xtr04090
]
100485847 (itgb4)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100485847 (itgb4)
Exosomal proteins of bladder cancer cells
100485847 (itgb4)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin beta subunits
100485847 (itgb4)
CD molecules [BR:
xtr04090
]
Proteins
100485847 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_integrin
Ig_DSCAM-DSCAML_C
I-EGF_1
PSI_integrin
EGF_Teneurin
EGF_TEN
EGF_2
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
100485847
NCBI-ProteinID:
XP_002940020
Xenbase:
XB-GENE-1013662
UniProt:
A0A8J0QRK6
LinkDB
All DBs
Position
10:44726928..44771287
Genome browser
AA seq
1835 aa
AA seq
DB search
MMNPRVLGGLLLLVLLLGLPASHSQSNKYNPCVASRATSCSACIRAYKDCSYCADEGFAS
VRCDLAENLRRYGCSERGIVYMRSEVLTQQSYDINTLVSKTQVAPQRMSMRLRAGEETSF
DLNVFEPLDTPVDLYILMDFSHSMSDDLANLKNMGQELANVVSTLSKNYTIGFGKFVDKV
TVPQTDMRPEKLKQPWLDSTPPFSFKNVIQLTSDVGKFRNELMKEKISGNLDPPEGGFDA
ILQTAVCTNQIGWRKGSTHLLVFSTESAFHYEADGMNVLDGILKRNDEQCHLDASGYYTH
DIVQDYPSVPTLVRLLAKNNIIPIFAVTNYSYSYYDKLSKYFKVSEIGELKEDSSNIVEL
LQEAFTQIRSRMDIRDDNTPRAMDVSVTSETAKVTETGSFQVTRGEVGTFKVKVKALERL
GNQHVCELPPQDQGSQILLKPSTFTDGLKIDASLICDSCPCELQKELSSPKCSFNGDFVC
GRCECRERWRGVYCNCSSTDTKSTQSCISPGSTEICSGRGECLCGTCQCHSESPTQQYQG
EFCQFNNFQCPRFLGYMCNDRGRCHMGACVCDAGWEGESCQCPTSNQTCLDRNGGLCSSR
GKCVCGRCQCDNVSQYTDATCEFSYSLRQLGVCEDLRTCVQCQAWGTGEKKGTQCEACEI
KIKMVDELKKVDERSENCTFRDETDDCTYEYSVDPHAVQGNYTVLVKNKKECPPGAFLWL
IPLLIFLMLLLGLLLLLCWKYCACCKACLAMLPCCGPGRTVGFKEDHYMLRQSLMSSDYL
NTPLVRSGSLKGGDTVRWKIDNNVHRQPPAPGTLNPKELVPYGVSLRLARLFTENLSKPQ
SRECTQLRQEVEDSLNEVYKVIPGTHKVKQTAFRLQSNAGKRQDHTIAETILMAPREAEP
EIVKVTEKHVTQEAFQDMKVAPGYYTVTSDRDAHGLVEFQEGVELVDVRVPLFIREEDDD
EKQLLVEALDVPSGIARLGRKLVNITIIKEQAKSIVTFVKPAYTYSRQEQVARVPVSREI
IQNGKTQVTYRSKDLTAREGKDYTFSEGELTFQPDDTQSEILVPILGRSEVDTLLGNKQV
KQFLLELSNPKYGAKIGKYPQCTITIDDTADVIQKTMTVQSVQSPRGKVGAPINLNAQAL
SARKIRLNWMPPPGKPTGYKVRYWIQGDSESDATVVDTNVPSAELVNLYPYCDYEMRVCA
YNAQEEGPFTDIVTCQTLEEAPSEPGRLAFNVISSTVTQLSWAEPAETNGEITAYEVTYG
MVNEDNKPIGPTKKVLINDSKKRMVLIENLRESQPYRYTVRACNKAGWGPERDATMNLAT
QPTRPMSIPIIPDAPIIDAEAGEEYDSYLMYSTDVLRSPVGSKRPSVSDESGQRWKYVPL
LGSEMDLRRVTWKLPVEVIPRLSVSSGLSTDNESLLDQPLTTSSLTRKGTMRATPEEQLI
NGRTEFSFSGGSLNRSMVSGYQQLSPHVQNESYRFGSSSSQHTSTTVISGQGSSGQNRLG
LPPLVLGGGRGRTHSEDVRDALTSLDVAIQDTRLSPGIPDTPTRLVFSALGPTSLKVSWQ
EPQCEREVLGYKVHYQLLHGGELRTIDITNPRENSVVVEDLLPNHSYMFRVKAQSVEGWG
PEREGVITIESQVDPQSPLSPVPGSPFTLSTPSAPGPLVFTALAPDSLQLSWVRPRKPNG
TILGYMITCEMLHGGGEPRTIYVEGDKPETSLTVPFLNENLPYKFKVQAKTTQGFGPERE
GIITIESQDGGNFSQFGTQQITRREVFNMPGEYTQSSITQSNITEPFFSDGMSVTTRRIE
GSNTVTQQVTKEFVTRTMMSGGSLNRQVERQFYDA
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccctcgtgttttagggggtctcctcctgcttgtcctgctcttgggtctccca
gcttcccattctcagagcaacaaatataacccctgcgtggcctccagagcaaccagttgc
tcggcctgtatccgggcgtacaaggactgttcctactgtgcagatgagggtttcgctagt
gtacgctgtgatctagcagagaatctgagaagatatggctgcagcgagagagggattgtt
tacatgagaagtgaagtcttgacccagcagagctatgacattaacactctcgtcagcaaa
acccaagtggccccccaaaggatgtccatgcgtcttcgtgctggggaagaaacctcattt
gacctgaatgtgtttgagccgctggacacccctgtggatttgtacattttgatggacttc
tctcattccatgtcagatgatttagccaacctaaaaaatatgggtcaggagttagctaat
gttgtaagcactctctccaagaattacaccattggatttggaaaatttgtggacaaagtg
actgtaccacagactgacatgagacctgagaaactgaagcaaccctggttggacagcact
cctcctttctccttcaagaacgttattcaactgacaagcgacgtggggaaatttcggaat
gaattgatgaaagagaaaatctctggaaaccttgatcctccagagggggggtttgatgcc
attcttcagactgctgtgtgcacgaatcaaattggctggagaaaaggaagtactcatctg
ttggtcttctctactgagtcagcattccattatgaagctgatgggatgaacgtacttgat
gggatactgaagcgaaatgatgagcagtgccacttggatgcctctggttactacacacac
gacatcgtccaggactatccatctgtgcccacacttgttcgactgttagcaaagaacaac
atcatccctatctttgccgtcaccaactactcctacagttactatgataagctgagcaag
tatttcaaagtatctgagattggagaattgaaagaagattcctccaacattgtggagctc
ttgcaggaggcctttacgcaaattcgttccaggatggatatccgagatgataacacccca
cgtgcaatggatgtctcagtcacttctgagacagctaaagttacagaaacaggatcgttt
caagtcacccggggagaagtgggtaccttcaaagtgaaggtcaaggctttagaacggttg
ggcaaccagcatgtgtgtgaactaccaccacaagaccaagggagccaaattctcctcaaa
ccttccacctttactgatggccttaagattgatgcttctctgatctgtgacagctgtcct
tgtgaattgcaaaaggagttgagttcccccaagtgcagctttaatggcgactttgtgtgc
ggacgctgtgagtgcagggagcgctggaggggagtatattgtaactgctccagcacagac
accaaaagcacccaatcgtgtatatcaccaggcagtacagagatttgctccggcaggggt
gaatgcctatgcggcacctgtcagtgtcactcggagtcccccactcaacagtaccagggg
gagttctgccagttcaataacttccagtgcccacgttttcttggatacatgtgcaatgac
agagggcgctgtcacatgggagcctgtgtgtgtgatgctggctgggaaggagagagttgt
cagtgtcctaccagcaaccaaacctgccttgataggaatgggggtctgtgcagtagccgt
gggaagtgcgtgtgtgggcgctgccagtgtgataacgtgtcacagtatacagacgccacg
tgtgaattctcctattcactgcgccaactgggtgtgtgcgaagacctgcggacgtgtgtg
cagtgccaggcctggggaactggagagaaaaagggcacacaatgtgaagcttgtgaaatt
aagattaaaatggtggatgagctgaagaaagtggatgaaagaagtgaaaactgtactttc
cgggatgaaacagatgactgtacatatgagtactcagtagaccctcacgcagtgcaagga
aactacactgtgctggtcaagaacaaaaaagaatgtcctcctggagccttcctctggctt
atccctctactcatctttctgatgcttctccttgggctcttgttgctcctgtgctggaaa
tactgtgcctgttgcaaggcttgcttggcaatgcttccctgctgtggaccaggacggaca
gtgggatttaaagaagaccactacatgttaaggcaaagcctgatgtcatctgattacctg
aataccccactggtgcgttctgggagcctcaagggcggggacactgtaagatggaagatc
gacaacaacgtgcaccgccaaccacccgcccctggaacactgaaccccaaggagcttgtc
ccatatggcgtctcactgcgtctggcccggctgttcactgagaacctgtccaagcctcaa
tcccgtgagtgtacccagctgcgtcaggaggtggaagattcgttaaatgaggtgtacaag
gtgatacctggaacccacaaggtgaaacagacagctttcaggcttcagtccaatgcagga
aaaagacaggatcacactattgcagaaaccatcctgatggctccccgggaggctgaacct
gagattgtaaaggttacagagaaacatgtaacacaagaggctttccaggatatgaaggtt
gccccaggttactatacagtgacgtcagacagagatgcccatggacttgtagagttccag
gagggagttgaattggtggatgtccgggttcctctcttcatcagggaagaggatgatgat
gagaagcagttgttagtggaagctctggacgttccatcaggaattgcccgtttggggcgg
aaactggtcaatattactattatcaaagagcaagccaagagcatagtgacgtttgtgaaa
cctgcctacacctacagccgacaggaacaggttgcccgtgtcccagtttctcgtgagatc
atccagaatggaaagacacaagttacatatcgttccaaggacctgactgctagggaggga
aaggactatacattctcagagggggagctcaccttccagccagatgacactcaatcagag
attctagtgcctatactcggtcgttcagaagttgacactctgctgggaaataaacaagtc
aaacagttccttctagaactcagtaatcctaagtatggggccaagattggcaaataccca
caatgcaccatcactattgatgacactgcagatgttatacaaaagacaatgacagtccag
tctgttcagtccccccgtgggaaggtaggtgctcctatcaacctgaatgcccaggccctc
agcgccaggaaaatccgactcaactggatgccgcctcctggaaaacccacaggttacaag
gtgcgttactggattcaaggagattccgagtcagatgcgactgtggtggatacaaatgtg
ccctctgcagagctggtcaatctgtacccctactgtgactacgagatgcgggtatgcgca
tacaatgctcaagaggagggtcccttcactgacatagtcacctgccagaccttggaggaa
gcacccagtgaacccggccgcctcgcctttaacgtcatttcaagcacagtgacgcagctg
agttgggcagagccagctgaaaccaatggtgaaatcacagcgtatgaggtcacctacgga
atggtcaacgaggacaacaaacccattgggcccacgaagaaagtcctgattaatgattca
aagaagcgcatggttctaattgaaaacctacgagaatcccagccataccgatacactgtg
agagcctgcaacaaagctgggtgggggccagagagagatgccaccatgaacctagctacc
caacccacccgcccaatgtctattcccattatccctgatgctcccattattgatgctgaa
gctggggaagaatatgacagttacctgatgtacagcaccgatgtcctgcgctctccagtt
ggcagcaagagacccagtgtgtccgacgagtcaggccagcgctggaagtatgtccctctc
ctgggctcggagatggacctgcggcgggtcacctggaagctacccgtagaggtcatacca
cgcctgtccgtcagcagcggcctgtccactgacaacgagagcttgctggaccagcctttg
actaccagctcactgacgaggaaagggaccatgcgagcaaccccagaagagcaattaatt
aacggacgcacagaattctccttctcgggcggcagtctcaaccgttccatggtatcaggg
taccagcaactcagcccgcacgtgcaaaatgaaagctacaggtttggtagcagcagttcc
cagcatacatccacaacggtcatatcagggcaaggctcatcagggcagaacagactgggg
ctccccccattggtgttaggaggaggaaggggacgaacccactcagaggatgtgagggat
gctctgacaagcttggatgtggccatacaggatacacgtctctccccgggaatcccggat
acccctacccgtctggtattctcagctctgggacccacctccctaaaggtcagttggcag
gagccgcaatgcgaaagagaagttctgggatacaaagtgcattatcaactactgcatgga
ggtgaattaaggaccatcgacattacaaacccacgggagaactcagtagtggtggaagac
ttgcttcctaaccactcgtacatgttccgtgtgaaggcacaaagcgttgagggctggggg
cccgaaagagaaggcgttatcactatcgaatcacaggtggatcctcagagtccactcagc
cctgttccagggtctccattcaccctaagcacccccagtgctcctggaccactggttttc
acagctctggcccctgactccctgcagttaagttgggtgagaccccgaaagcctaatgga
acaattctggggtacatgatcacttgcgagatgttgcatggaggaggggaaccacgaacg
atctatgttgaaggtgacaaacccgagacttccctgacggttcctttcctaaatgaaaat
ctgccctataaatttaaggtccaggcgaaaaccacacagggttttggaccagaacgggaa
gggataattactattgaatctcaagatggaggaaacttttctcagtttggaacacaacag
atcacacgccgagaggtgttcaatatgccaggagaatatactcaaagcagcatcactcaa
tccaacataacagaacccttcttttcagatggaatgagtgtcaccacccgccgtatcgag
ggctccaacacagtcacacaacaggtcaccaaagaatttgtcacacggaccatgatgtct
ggcggctccctcaacaggcaagtggagcgccagttttacgacgcatga
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integrated database retrieval system
