Xenopus tropicalis (tropical clawed frog): 100485888
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Entry
100485888 CDS
T01011
Symbol
zfpm1
Name
(RefSeq) zinc finger protein ZFPM1 isoform X2
KO
K17441
zinc finger protein ZFPM1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100485888 (zfpm1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
100485888 (zfpm1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FOG1-like_PR
zf-met
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
100485888
NCBI-ProteinID:
XP_002936146
Xenbase:
XB-GENE-940294
UniProt:
A0A6I8QDX3
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Position
4:66435414..66521937
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AA seq
1214 aa
AA seq
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MWACGQLEPALPASPTPCLATLTAQRTEMSRRKQSNPRQIKRSLGDMEDTEDKLIDESNC
SDKDGASSDQDGSVDCGSSSPANSDSNEGNRCNSVTQSLDQETEDVASKPSLDELGQVLT
SPCPSEGELAENEENTPVPRSPSSTKDVEEPQIWNGPDELELEISSTDGVGHIRARSQLH
KGFSWGPYKGNFTGSSSSPGPTDLNVSLSLDVEGDCWLKYVTLVSCEAEANAVLYRKGDQ
IWCKTSQIVEQGEMIQAFLMAEPQAIPNYTIKEEPGETSQCTSTLPEFQLLPQQAGMAAI
LATAVVNKDVFPCKDCGIWYRSERNLQAHLMYYCASRQSSTSPSMEEKPKDSYPNERICP
FPQCKKSCPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLNGVCHGC
GFISTTRDILYSHLVTNHMVCQPGSKVDVYPVVKAVAAVKSANPAVSQIASSSLLKCGLC
GFLADGLPSLQQHALLHTTNSSPAATHSVKSPAENQKEKQNLEGQENGNAKSPISSSSSG
SEEAPLKLNIKEEPEMQHSISEAGSTICEAKDGVALVQSPAIKVKTEMSSPTPGSSPVPN
ETAAATGGGTVIIPHYVFGHEATAAIVPQASEILAKMSELVHSRLKQGQAVTPAGFSGSS
APKGATCFECEITFNNINNYYVHKRLYCSGRHVLDESSSAARKVKASPARTSLASGFSSS
EQEASPPQEDAGGESSTPVVAVKIEESSGMDCEGTGSGHVSEGSQSPSSLDDPDEDPTRT
VCEACNIRFSRHDTYVVHKRYYCASRHDPPLRRSGVNKTGPPYATQPTPRTRKRRKLYEI
HGVVPSESTPPQPHPLGRVEAMALMPGLIPAPAVPSPSSSPDAADGPIDLSKKPRLVTEA
PVPSPVATVAPLADYHECTACRISFNSLESYLAHKKFSCPTAPLQQKALHQLQKVKSPSS
ATGKLVDDTVKVKVKVESRASMSPGSVSETTQPLALQLSAISDPKQLKHISSVTETSPPA
TTTCPYCPHNVIIRGDLLEHFRSVHGLLLAKPTAGHRLQTTFMEVLVPARGQTSSASENS
LPSPPVPSASPLQLPGLRRENSNYKDTTSSSSSSANGSPVLTSTPRPIMPTSPALPLNSV
PMAESRREDALRVPSQVLLPGDKAMQPPKTGLTSQVPNGNHRYCRLCNIKFSSLSTFIAH
KKYYCSSHAAEHVK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatgtgggcagcttgaacctgccttgcctgccagccccaccccctgcctggcc
accctgactgcccagcgcacagagatgtccagaaggaaacagagcaatcccagacagatc
aaacgttcccttggtgacatggaggacactgaagacaagcttatagacgagtccaattgt
tctgacaaagatggagcctcctctgatcaggatggatcagtggattgtggttcttctagc
cctgccaacagtgatagcaatgaaggaaacagatgcaactctgtgactcagtctttggac
caagaaactgaagatgtggcctcaaaaccttcccttgacgagcttggtcaggtccttaca
tctccctgtccttcagagggagagttagcagaaaatgaagaaaacactccggtgcctaga
agcccatccagtactaaagatgttgaagaaccacaaatatggaatgggccagatgagctt
gaattggaaatttcttctacagatggagttggacatattcgtgcccgaagtcaactgcac
aaaggtttctcttggggaccctacaaagggaatttcactggctcctcctcttcacctggc
ccaactgacttgaatgtctccctttcattggatgtggagggtgattgctggctgaagtat
gtgactttagtctcctgtgaagctgaagctaatgctgttctgtaccggaaaggtgaccag
atctggtgcaaaacatcacaaatagttgaacaaggtgaaatgattcaagccttcttaatg
gctgagccccaggccattcccaactacactatcaaagaggagccaggagagacttcccag
tgtacttctactctaccagagttccagctgctcccccagcaggccggcatggctgccatt
cttgccacagctgttgtcaacaaggatgtgtttccttgtaaggactgtggaatctggtac
cgcagtgagagaaaccttcaggcacatctcatgtattactgtgctagtcgtcaaagttct
acttccccgtccatggaggagaaacctaaggattcataccccaatgaaagaatctgccct
tttcctcaatgcaaaaagagttgccctagtgccagctcgctggagattcatatgcgaagt
catagtggcgagagaccgtttgtgtgcctgatctgtctgtctgccttcaccaccaaagcc
aactgtgagcgccatcttaaagttcacacagacaccctgaatggtgtctgccatggttgt
gggttcatctcaaccactagagatatcctatacagtcatctagtgaccaatcacatggtc
tgccaaccaggatccaaggttgatgtgtaccctgttgtaaaagcagtagccgcggtcaag
tcagcaaacccagctgtgagccaaatagcctcttccagtcttctgaaatgtggcttgtgt
ggatttctggcagatggacttcccagccttcagcaacatgcactcttgcacacaacaaat
tcttcaccggctgccactcattctgtcaagtccccagctgagaatcaaaaggaaaagcaa
aaccttgaaggacaagaaaatggaaatgccaagtcacctatctcatcgtcatcttctggt
agtgaggaggcccctctaaaactcaatataaaagaggagccagagatgcaacacagcatc
agtgaagcaggaagtaccatttgtgaggcaaaagatggagtagcattagtgcaatcacca
gccataaaggtgaagactgaaatgtctagtcctactcctgggtcaagccctgttccaaat
gagacagcagctgctactggtggaggaacagtaataatcccacactatgtatttgggcat
gaggctactgcagctatagtccctcaagcatctgagattcttgccaagatgtctgagtta
gtacacagtcgtctaaaacagggccaggcagttactccagcagggttttcagggtcttct
gcaccaaaaggagctacatgttttgagtgtgaaataaccttcaataatattaacaactac
tacgtacataaaagattgtattgctctggaaggcatgttttagacgaaagttctagcgct
gctcgtaaagtcaaggcttcaccagctagaacatcattagcatctggtttctcttcttct
gagcaagaagcatccccaccacaagaagatgcaggaggagagagcagtacaccagttgtt
gcagtgaaaatagaggagagctctggcatggattgtgaaggaacaggaagtggtcacgtg
agtgagggcagtcagagccccagctcattagatgatcctgatgaagacccaacccgtaca
gtttgtgaggcatgcaacatccgttttagccgtcatgacacatatgtagtgcacaaacgt
tactactgtgcatcacgacatgacccgccattgcgtcgtagtggagtaaacaagactggg
cctccatatgccactcagccaactcctcgcacaaggaaacggcgtaagttatatgaaatc
catggtgttgttccatcagaatccactcctccccaaccacatcctcttggaagggtagaa
gctatggcactgatgccaggtctaatacctgcacctgctgtgccttccccgagttctagc
ccagatgctgctgatgggccaatagatctaagcaagaaaccccgattggtgacagaagca
ccagttccatctccagtagccactgtagcaccacttgctgactaccatgaatgcactgca
tgtcgcattagttttaacagcttagaaagttacttagcccataaaaagttttcttgccct
acggcacctctacagcaaaaggcccttcatcagcttcagaaagttaaatctccttcatct
gccacaggaaagcttgtagatgatactgttaaagttaaagtaaaagtggaaagtagggca
tctatgagcccaggatctgtcagtgagaccacccaacctcttgctttgcaactctctgct
atctcagaccccaaacaacttaagcatatttcatctgtcacagaaacatccccacctgca
acaaccacttgtccctattgtcctcataatgtgataataagaggagacctgcttgagcat
tttagaagtgtccatggtcttttgctggcaaagccaactgcagggcatagattacaaact
acttttatggaggtgttggtgcctgctcgtgggcaaacaagcagtgcatcagaaaacagt
ctgccaagtccaccagtaccatctgcttcaccccttcagctgccgggtctaaggagggag
aattctaactacaaagataccacctcctcctcttcttcttcagcaaatggtagccctgta
ttgacaagcactcccagacctattatgccaacttctcctgcccttcctttaaattctgta
ccaatggctgaaagccgaagagaagatgcactcagggttccaagccaagtcttgcttcct
ggggacaaagcaatgcagcctcccaaaactggtttgacttctcaagtgcccaatgggaac
cacaggtactgtcgcctttgtaacatcaagttcagcagtctgtctacattcatcgctcac
aaaaaatattattgctcctcccatgctgcagaacatgtgaaataa
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integrated database retrieval system
