Xenopus tropicalis (tropical clawed frog): 100485928
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Entry
100485928 CDS
T01011
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100485928 (nsun5)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
100485928 (nsun5)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Other ribosome biogenesis factors
100485928 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
100485928
NCBI-ProteinID:
XP_002933655
Xenbase:
XB-GENE-6468312
UniProt:
A0A7D9NLU7
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All DBs
Position
2:41898714..41913560
Genome browser
AA seq
492 aa
AA seq
DB search
MAVYQTAAGILEKLQRKEGAVKTLVYDSGFKNVRQLYALVCETLRYASVLEDIITSSQLL
RGTKKLPLSLAKVLVYDLLFGKGLQCGGRWKAVILGHKARLRAELARLKVKKKVSSNEDL
VTSLGGGAVGPALPRYVRVNPIKTCLNDVIAYFKRRGYTYLGKARSIEELAELGQKSGKR
FLQDLHVPDLLAFPPGTDLHKDSLYTAGHLILQDKASCLPALLLAPPVGSCVIDACAAPG
NKTSQLAAMLQNKGKLFAFDLDTKRLATMSTLLLRAGVTCQELANQDFLTVSPEDPKYQK
VSHILVDPSCSGSGIPDQMRILADKEESAQSERLEALSGFQRRALSHALSFPSVQRVVYS
TCSIHQQENEEVVRDILEQHPHFSLIDALPSWPMHGLNIFPGSSCCLRATLSDTLTNGFF
VAVFQRQKKENESHFPDKPEEKTPSCDVEVTTNELEIIQNNGTEAETEPMKITHKSKRKV
KSRKKKQKTDKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtaccagacagcggctggtatcttggagaagcttcagcgcaaggaaggggca
gtcaagactctggtgtatgatagcggatttaagaatgtacggcagctgtatgcacttgtt
tgtgagacactgagatatgcatcagtacttgaggacataataacaagctcacaattgcta
cgtgggactaagaaactacctctcagcttggctaaggttctagtatatgaccttctgttt
gggaagggactacagtgtggtggacgatggaaagcagtgatccttggccataaggcacga
ctgcgggctgagctcgcacggctgaaagtgaaaaagaaggtcagcagcaatgaggacttg
gtgacctctcttggaggtggagctgtggggcctgctctaccacgttatgttcgtgtgaac
ccaattaagacctgcttgaatgatgtgattgcttactttaaacgccgtgggtacacatac
ttgggcaaagcacgcagtattgaggagttggctgagcttggtcaaaagtctggcaagcga
ttcttgcaagacctgcatgtcccagacctattggccttccctccaggcacagacctgcac
aaggactctttgtacacagcaggccatctcatacttcaggacaaggctagttgtctccca
gcactgcttctggcccctccagtgggttcctgtgtaattgatgcttgtgctgctcctgga
aacaaaacaagccagttggcggcaatgttacagaacaaggggaaattatttgcttttgat
ctggacaccaagcgtttagccacaatgagcacgttgctcttacgagctggagtcacttgt
caggagcttgccaatcaggacttcttgacagtcagtccagaggaccccaagtaccagaaa
gtcagccatatcttggtggacccatcatgcagtggatctggaattcctgaccaaatgagg
atcctggcagataaggaagagtctgcacagtctgagcggctggaggctttgtcaggtttc
cagcgtcgcgctttgtcccatgcccttagtttcccatctgtgcagagggttgtctactcc
acctgctccatccaccaacaggagaatgaggaggtggtgagggacatcctggagcagcat
ccacatttcagtttgatagatgctctcccatcttggcccatgcatggactcaacatcttt
ccaggctcaagctgctgcttgcgtgcaaccctatcagacactcttaccaatggcttcttt
gttgctgtttttcagcgccagaagaaagagaatgagagccattttccagacaaacctgag
gagaagacacctagctgtgatgtggaagtgacaacaaatgagctggagataatacaaaat
aatggaacagaagcagagactgagccgatgaagattacccacaaaagcaagaggaaagta
aagtctcgcaagaagaaacaaaagactgacaagctctag
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