Xenopus tropicalis (tropical clawed frog): 100485964
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Entry
100485964 CDS
T01011
Symbol
rbm44
Name
(RefSeq) RNA-binding protein 44 isoform X1
KO
K25080
RNA-binding protein 44
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100485964 (rbm44)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
RRM domain-containing proteins
100485964 (rbm44)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
TTC3_9th
wHTH_TTC3
RRM_5
DUF7373
RRM_PARP14_3
DUF7130
Motif
Other DBs
NCBI-GeneID:
100485964
NCBI-ProteinID:
XP_017953039
UniProt:
A0A803K105
LinkDB
All DBs
Position
9:60558318..60609266
Genome browser
AA seq
1420 aa
AA seq
DB search
MQQPVILNNFTFHNGDYNCFPGKYALPTTPRNMVMHFHDEVASSYLPVYKLQGLNICRGG
LQNCHQMYFPVANDCATVGSSVTFPSFPVQDTFHQSIPAQNEFLYSNAVNPAETTCQSCK
EKKREILSRQVADIVSQHGCLEVNSKEILGWYIMLSEEDRRIIKESGSLHRFLQDNTSVL
QVKDKWVMLKGFLCKNLKKYSAKGHSLNKANQGTFHCVWSCENCGFINSLDMAVCKQCHS
AAKQLEQSSVRADDFANSGSKIGDLTVDKNLTQTKSRSKTAVCSELMFCTSNIENFVSEE
NCQKKANTLYGGSQNPTAFEQKKIETCILKKASKGIQESDATKPVQLMDDHKLKEKYVIS
NTSTFRSIERIYATVGKLQENPADVQTDTWDTEKWEDFVLAPDSRHLFQSEPHRKSPSIF
SYSEVESLDILSEKEKPPGPHQYPYEKPNNSILHQHKENVPNAWDVLEDSGITGDQVLCN
ESGCKECHEDLGQKEKPSLLQKYLTDYIKKDVSQECLPGDNFDDFFSVRSSSCCSICSNS
SLPFSLDDLNDTEYCCFEEAVDGHSIQALNTLSKKPECMVSATSSSGSATFIPSTMVSEG
VNTEVTGLNIPGLEEARANSKRTVSSNTVPSWILSCVTEEKESQTINTETQHVSVNTDLS
LAFCSTTAQNILNERAGDSCGKDGLAVNWKAKSRDELMRRVLKTELQLLNTQRMFCRQLC
CQAHQRSLEKQCALSLNGASFEQLTETSPLNLASVFSEVEEIYEKMKARILSGVALEDMV
PLSAQLTKVDIAAEYPDFQPNVEVFKSICDGFVDKNKDTLISSLQAQDQSIKQKDNSPTL
DATEDWFDAQENITVECPKDLSECIKELDKKEDVSEDKNAVIVMSSDLSKKETKKSASSQ
SRCVYVHVGNIAHSVTEENLLMHFEKYHVCKVFLQKLSMKSSYAVLTFDDASQAQAAVKE
MDGKDLSGRKIKVRYIKESQDTVIEVFQTLIPDSTKTENQRPMVFASKPSSKNIDTRPIL
SKATPASRAEPQKTLSYKKPEDIAWNTQNYGRPVSQTVPYCAPPTSPNIFPPVPPWMAPS
LLSSLVTFNSMHNPWIFTYSGPQYPPLYPPHAPVCAPFPPQASYMQAKSVQNSLGTITMN
EKNDVCGSTKPSEPKKVSSKGSNILSSSVNNLMQMTQSLKEVPVSRAATVAAPVKMGTAQ
TEGPPFASNASSPKTKAPAKTTPAVLGKPSSADHLRVQSLDPISVATTEMTKTVEVTQIS
STTVPLRAPSFLPLTVTIPKQGSSDTNHHYTEPLSDSPSAPTGHSSLNHPVNASVAFKIS
SKPVSATKRDQFHIDEELKVLPELDLSSELPVNIIPNRLNLSSFDRLMTRLTALHPEVSS
DEIVSTLQELRASRGGFLSGLSIEYLVRKVSSMLTNKPKV
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctgttatcttgaacaacttcaccttccataatggagattacaattgcttt
ccagggaagtatgcactccctactaccccaaggaacatggttatgcatttccatgatgag
gttgcttcctcctatcttcctgtatacaaactacagggcctaaatatttgcagaggagga
ctgcaaaactgtcaccaaatgtattttcctgtagctaatgactgtgctacagtaggaagt
tctgtgacttttccttctttcccagttcaggatacgtttcatcaaagcatccctgcccaa
aatgagtttctgtatagtaatgcagtgaaccctgcagagaccacgtgccaaagttgtaag
gaaaagaaaagagaaatactcagcaggcaggtggctgacatagtaagccaacatgggtgc
cttgaagtcaacagtaaggagattttgggatggtatataatgctttctgaggaagatcgt
agaataattaaagaatctggttcccttcatagatttctacaagacaatacttccgttctc
caagtaaaggacaaatgggtgatgcttaagggcttcctctgcaagaacctgaaaaaatat
tctgcaaaggggcacagcttaaacaaagcaaatcagggaacattccactgtgtttggtct
tgtgaaaactgtggcttcattaacagccttgatatggcagtttgcaaacagtgccacagt
gctgcaaagcagctggagcagagcagtgtcagagcagatgactttgcaaattctggcagc
aagattggtgatttaactgtagacaaaaatctgacacaaacaaaaagcagaagcaaaaca
gcagtttgctctgaattgatgttttgtaccagcaacatagaaaattttgtgtcagaagaa
aactgtcaaaaaaaagcgaatactctttatggaggaagtcaaaatcctacggcctttgag
cagaaaaaaatagaaacctgtatactaaagaaggcttcaaaaggcatacaggaaagtgat
gcaactaagcctgttcaactaatggatgaccataaactcaaagaaaaatatgtcatatct
aacactagcacgtttaggtctatagagagaatttatgcaacagttggtaaactgcaggag
aaccctgctgatgtgcaaacggatacttgggacacagagaagtgggaagattttgtcctt
gctcctgattcaaggcacttattccagtcagagccccataggaaatccccaagtattttc
agctattcagaagtagaaagtctggatattttgagtgaaaaggaaaagccccctgggcca
catcaatatccgtatgaaaagccgaacaattctatcttacatcagcacaaagaaaatgta
cccaacgcttgggatgtattggaagactcaggaataacaggagatcaagtgttatgcaat
gagtcaggctgcaaagaatgtcatgaggaccttggacaaaaagaaaaaccttcacttcta
caaaaatacctcacagattatattaagaaagatgttagccaagagtgtttacctggcgac
aattttgatgatttcttttctgttcgaagtagcagctgttgtagcatttgcagcaactct
agtttacctttctcactcgatgatcttaatgatactgaatactgctgttttgaagaggca
gtggatggtcattcaattcaagccttaaatacactttctaaaaaacccgagtgtatggta
agtgcaacctccagcagtggaagtgccaccttcattccatccaccatggtgtcagaaggt
gtgaatactgaagtgactggtttaaacataccgggtttagaggaagcaagagcaaatagt
aaaagaactgtatccagcaacacagtaccctcatggatattaagctgcgtaaccgaggag
aaggaatctcagactattaacacagaaacacaacatgtttctgtaaacaccgatttatca
ctagctttttgcagcaccacggctcagaatatactgaatgaacgagcaggtgattcctgt
ggtaaggatggtcttgcagtgaactggaaggcaaaatccagagatgagttaatgcgaaga
gtattaaagacagaactgcagcttctaaatactcagcgtatgttctgtaggcagctttgc
tgccaagctcatcagcggtctttggagaagcaatgcgccctcagcctgaatggagcatca
tttgaacagttaacagaaacttctcctttaaacttggcatctgttttttctgaagttgaa
gaaatctatgaaaagatgaaggcaagaatactttcaggagtggctctagaggacatggtt
cctttgtctgcacaacttacaaaagtggatatagcagcagaatatccagatttccagcca
aatgttgaagtgttcaaaagtatttgtgatggatttgttgacaaaaacaaggatactttg
ataagcagtttgcaagctcaagaccaaagtataaaacagaaagataatagcccaacttta
gatgccactgaggattggtttgatgcccaggagaatattacagtggaatgtcccaaggat
ttgtcagaatgtatcaaagagctggataaaaaagaggatgtttcagaggataaaaatgct
gtgattgttatgtcaagtgacttaagtaagaaagaaaccaaaaagtctgcctcaagccaa
tcaagatgtgtatatgttcatgttggaaatatagcacattctgttacagaggagaatttg
ttgatgcattttgagaagtaccatgtgtgtaaggtttttcttcagaaactatccatgaaa
tccagctatgctgttcttacttttgatgatgcctcccaagcacaagcagcagttaaggaa
atggatggaaaggacttaagtggaagaaaaattaaagttcgctacatcaaggaatcacaa
gatactgtaatagaggtatttcaaacattaatacccgacagtaccaagactgaaaaccaa
aggcctatggtatttgcatctaaaccctcttcaaagaacatcgacaccagacctatatta
agcaaagcaacacctgcaagtcgtgctgaaccccagaaaacattgtcttataaaaaacca
gaggacattgcatggaacacacaaaattatggaagacctgtttctcaaacagtgccatac
tgtgcacctcctacctctccaaacatctttcccccagtacccccttggatggcaccatct
ttattgtcttcactggtgacattcaatagtatgcacaatccatggatttttacatactct
ggcccacaatacccaccattatatcctccacatgctcctgtgtgtgccccctttcctcct
caagcatcttatatgcaggcaaagtcagtgcaaaattctttgggaacaattacaatgaat
gaaaagaacgacgtgtgtgggtctaccaagccatctgaaccaaaaaaagttagcagtaaa
ggctctaatattttgtcatccagtgtaaacaatttaatgcagatgacacaaagtttgaaa
gaagtgccagtttccagagctgcgactgtggcagcaccagttaaaatgggcactgctcaa
acagaaggaccaccctttgcatctaatgccagctctcccaaaacaaaggcacctgctaaa
acaacccctgctgttttagggaagccaagttctgctgaccacctcagagtgcagtctttg
gatcccatcagtgttgcaacaactgaaatgacaaaaactgtagaagtgactcagatttca
tccacaacagtccccttgagagcaccatcatttcttcctttgacagtgacaattcccaag
caggggagcagtgacaccaatcatcactacacagagcctctttcagattcaccaagtgca
cctacaggtcattccagtttaaaccacccagtaaatgcatctgtagccttcaaaatatct
tctaagcctgtgtctgcaacaaagagagaccagtttcacattgatgaggaacttaaagtg
ttgcctgagttggacctatcatctgagctaccagtaaacatcatacccaacaggctgaat
ctcagcagcttcgacagattaatgacacgactgacagccttgcatccagaagtcagcagt
gacgagatcgtcagtacattgcaggaattgagagcaagcaggggtggcttcctcagtggt
ttatccattgaataccttgtaagaaaggtttcatcaatgctgacaaacaagccaaaagta
tag
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