Xenopus tropicalis (tropical clawed frog): 100485986
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Entry
100485986 CDS
T01011
Symbol
nfasc
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100485986 (nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100485986 (nfasc)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
L1 family
100485986 (nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
V-set_CD47
Ig_6
DUF4998
Motif
Other DBs
NCBI-GeneID:
100485986
NCBI-ProteinID:
XP_004910753
Xenbase:
XB-GENE-922969
UniProt:
A0A8J0QZU1
LinkDB
All DBs
Position
2:64550378..64686387
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AA seq
1338 aa
AA seq
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MTDFLERRLTVIHYYCLGSNMPSCLVLLLLFLHLVCTIKVPLDPNIQRDLIQPPTIIKQS
AKNYIVDPRDNILIECEAQGNPYPMFSWTKNGKFYNVAKDPRVSFRRRSGTLEIEIHGGG
RPEDYEGEYQCSARNQHGTALSNKILLQVSRSPLWPKENLDPVVVNEGAFLILQCNPPHG
LPPPVIFWMSSLMEPIVQDKRVSQGLNGDLYFSNVLRQDTQTDYSCNARSHFTHTIQQKN
PYTLKVLTTRGVPERTPTFLLPTGTSSSKLVLRDEDLLLECIASGVPTPDIMWYKKGGEL
PSRKLKFENFNKTLRIIGVSEEDSGEYFCQASNKMGSIRHTISVRVKAAPYWLDEPKNLI
LAPGENGRLVCRASGSPKPTIQWFMNGDATEVGAPNPNFEIAGDTIIFREVQSGNSAVYQ
CNASNEHGYLLANAFVSILDVPSRMLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKN
GQGSNLDGGNYRVHENGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVKG
PEDQIAKRGSSVHLDCRVRSDSSLRLTVTWIKDDTQLYINSRMKKDEDGLTIFGVAEKDQ
GAYTCVAKTELDQDSSKAYLTIQETSSPTSRLTSQLIDKPDPPQDLELTEPSVRSVRLTW
VPGDDNNSPITGFIVQFEEDRHQPGTWHNLASVPANVNSVILQLSPYVNYQFRVLALNEL
GSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNNMEITWTPLNSTQAYGPNLRYNVKWR
QRHTGEPWSNITVWDNKHVVWNTPVYTQYELRVQAENEFGKAPEPSTMIGYSGEDYPKAA
PTDIKLRVMNSTAISLQWTRVAPASIQGSLLEYRAYFWRESSLLKGVWVSRKKQQQSFMG
DRVRGIVSQLIPYSIYKLYLVAVNGRGDGPKSDVKEFTTPEGVPSAPKYFRVYEPNREMI
VVEWGHPEHPNGNLTAYNLRIQPFNGTRTGKAVFETLSRNQTKYTLQRTDPVSRYRFAIN
ARTQVGAGEVITAESPVRLDEVSPTSVSSKSPAPVTDAPTEVPTIPPTSSGATTLLATTS
TTSVTTTTAGTESSLVAITRIPNIATTGPSLWNLTALPNTYWANITWMHNLEPGSVFMVE
YTDSNNTVKTVPVKAHVPSIQLFDLVPGMTYRVRVYSQEHPSVTSLYVTFDTSSAYTKNQ
VDIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVREKKEVALGPDDNKEGDGSFD
YSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKDETE
GNESSEATSPVNAIYSLA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttctagaaaggaggttaacggtgatccactactactgtctcggaagcaac
atgccatcatgtttagtccttctcctgctctttctccacctagtctgcactattaaagtt
ccactggacccaaacattcagcgagacctaatacagcccccaaccatcatcaagcagtca
gcaaagaattatattgtagatccccgtgataacatcctaattgagtgtgaagctcagggg
aatccttacccaatgttttcatggacaaaaaatgggaaattttacaatgtggcaaaagac
cctcgagtgtcattccgtcgacgatcaggcacccttgaaatagaaattcatggaggaggg
cggccagaggactatgagggagaataccaatgctctgcccgcaaccaacatggaacagct
ttatcaaataagatcttacttcaagtctctcgatcccctttgtggcccaaagaaaacctt
gacccggtggtggtaaatgaaggtgccttcttgatccttcagtgcaatcccccacatgga
cttcctcctccagtcatattttggatgagcagcttgatggagcctattgtccaggacaag
agggtttctcagggactgaatggggacctttatttctccaacgttctgcgccaggatact
cagactgattatagctgcaatgcacgctcccatttcacacacaccattcaacagaagaac
ccatatactctaaaagtgcttaccaccagaggggtacctgagagaaccccaaccttcttg
cttcccacggggacttctagcagtaaactggtgttacgcgatgaggacttgctactggag
tgtattgcttctggagtaccaacgccagacatcatgtggtataagaaaggaggagagcta
cccagcaggaagctgaagtttgaaaattttaacaagactctacgcataattggagtgtct
gaagaggactcgggggagtatttctgccaagcttcaaacaaaatgggcagcattcggcac
acgatttctgttcgggttaaggctgctccatattggcttgatgagcccaagaacttgatt
cttgcaccaggtgagaacggacgtttggtatgtcgtgccagtggcagccccaaacctaca
atccaatggtttatgaatggagatgctactgaagtaggtgccccaaatcccaacttcgaa
atcgctggtgataccattatttttagagaagtacagagtggcaacagcgctgtataccaa
tgcaatgcttctaatgaacatggttatctgttagctaatgccttcgtcagcattctggat
gttccatctcggatgttgggccctcgtaatcagctgattcgagtgatagaatacaacagg
acccagctagactgccctttctttggctctcctatacctacactccgctggtttaaaaat
ggacagggtagtaacctcgatggtggcaattaccgggtgcatgaaaatgggacccttgag
attaatactgtgaggaaggaggaccaaggcaaatacacatgtgttgctaccaatattttg
ggcaatgctgaaaatactgtgcggctggaggtcaaagagccaactcgtattgtaaagggc
cctgaagatcagattgcgaagaggggctcttctgtgcatctggactgtcgagtgcgcagt
gactcctcactcagactcactgttacctggataaaagatgacactcagttgtatataaac
agcagaatgaagaaggatgaggatggacttacaatattcggtgtggcagaaaaggatcag
ggagcatatacatgtgttgctaaaactgaattagaccaggactcttctaaagcttatctc
acgatacaggaaacttcctcacctactagccgactgacctcccagcttatagacaaacca
gaccccccacaggacctggagctaactgaaccatcagttaggagtgttcgcctcacctgg
gttccaggggatgataacaacagtccaattacaggtttcattgtacaatttgaggaagac
aggcatcagcccggtacatggcacaaccttgcctctgtccctgctaatgtgaactctgtc
atactgcagctttctccttatgtcaactaccagtttcgtgttcttgcactaaatgaactt
gggagcagtatgccaagcccatcttcagaacgttttcagacagcaggagcacctccagaa
actaatccaggtgatgtgaagggagcagggactagcaaaaacaatatggaaatcacatgg
acaccactgaactccactcaggcgtatggtccaaacctgcgctacaacgtgaagtggcgc
caacgtcacacaggagaaccttggagcaatattacagtgtgggacaacaagcatgtggtg
tggaatacaccagtatacacccaatatgagctaagagttcaggcggaaaatgaatttgga
aaggctccagagccaagcaccatgattggatattctggtgaagactatcctaaggctgca
cccactgacattaagcttcgggtcatgaacagcaccgccatctctcttcagtggacacgt
gtggcacctgcctctatccaaggaagcctactggaatacagagcttatttttggagagaa
agtagtttgctgaagggtgtctgggtctcacgaaagaagcaacaacagagttttatgggg
gaccgtgtgagaggcatcgtatctcaactgattccatacagcatctacaagctgtacttg
gtggcagtgaatggccgaggggatggccccaaaagtgatgttaaggaattcacaacccca
gagggagtgccgagtgctcctaaatactttagagtatatgagccaaaccgggaaatgatt
gttgttgaatggggtcacccagagcacccgaacggaaacttgactgcatacaacctccgc
atccaaccatttaatggcaccagaacagggaaggctgtatttgaaactctttcacgtaat
caaaccaaatataccctgcaaagaacagatcccgtgtcccggtatcggtttgctatcaat
gccagaacgcaggttggtgcaggggaagtcatcacagctgagtctcctgtcagactggat
gaagtttctcccacgtcagtgtcttctaagtctcctgcacctgtcacagatgctcccaca
gaggtcccaactattcccccaacctcatctggtgccaccactcttctagctacaaccagt
acaaccagtgtcacaacgactactgctggtacagaaagttcgctggtcgccattactaga
attcctaatatagccaccactggaccatctctatggaacctaacagcattacccaacact
tactgggcaaacatcacctggatgcataacttagagccaggctctgtgtttatggttgag
tatactgacagtaataatacagtgaaaactgttcctgttaaggctcatgtcccttctatc
caactgtttgatctggtgcctgggatgacctacagggtgcgggtttactcccaggagcac
ccgtcagtcacaagcctatatgtgacatttgataccagctcagcttacaccaagaaccaa
gttgacattgctacacaaggctggtttattgggctcatgtgtgcagttgctctactggta
ctgattttgctgatcgtttgttttatcaaaagaagccgaggaggcaaatacccagtgcga
gaaaagaaggaggtggcgttgggaccagatgataacaaagagggggatggctcatttgac
tacagtgatgaggacaacaagcccctgcagggtagtcaaacttcgctggatggaaccata
aagcaacaagagagtgatgacagccttgttgattatggagaaggaggagaggggcagttt
aatgaagatggatcgtttatagggcagtatacagtgaaaaaggacaaagatgagactgag
ggaaatgaaagttcagaggccacatctcctgtaaatgctatctattctctggcatag
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