Xenopus tropicalis (tropical clawed frog): 100486072
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Entry
100486072 CDS
T01011
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100486072 (ttf2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100486072 (ttf2)
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
fn2
Motif
Other DBs
NCBI-GeneID:
100486072
NCBI-ProteinID:
XP_031753110
UniProt:
A0A8J1J7W3
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All DBs
Position
2:618035..659310
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AA seq
1240 aa
AA seq
DB search
MSRKNMDSDSCVQPYSNGFSPSRLYYRCVKSKSDGKKWCGHVPWQDPNQKTVPHCKPSQH
PTEKPERNPFKVINEDPRIGVWRRFNEEPKAKAENPKKCDQETSPGADGGKVHDHRRQPQ
EREPSGEERRPVLQGGVISKEKSSVDTRKPSGEERRPVLQGGPSSKEKSSVDTRKPSGEE
RRPVLQGGPSSKEKSSVDTRKPSGEERRPVLQGGPSSKEKSSVDTRKPSGEERRPVLQGG
PSSKEKSSVDTRMPSGEERRPVLQGGPSSKEKSSVDTRKPSGEEEHKSACEKVSHVLGER
EMFGEAQEEERSPHQGWRDKPLPSGMKVKKTEQESAPEENTGRVVETPQECGPNTRESSA
SKGHEGNGETQASGTARPTHTHTHTGSQVRTEGAQLTESHTSSTPSPQAERGHSAHVPHK
QEEEDVVFVSSIPGTEKPPLAPPARTSGGGKQRTITSFPGFNQSPEAQSPSALHSQLSAQ
LQQKKATLAAVNLQALPDRGVRLLKQVQDLEDALSSLSLCPETAEEKGSSQSEMSLPKSA
PENPFSKPGPVESAGGVKPLSFHELPPMSLGLHGSAPGPSLSQNFSSLYKVSPEWQALYG
GRMTEERLFAIRNATSEAIEHLHKSLESCPSPDCTVQDPAGLKVPLLLHQKQALAWLRWR
EAQTPRGGILADDMGLGKTLTMVALILMQKQQQNREQEKKLEEWISKTDSTLTVTRGTLI
VCPASLVHHWKKEVEKRVSGSRLRVYLYHGPSRERDCSVLADYDIVVTTYSLVSKEIPVK
KEEGEAPAKDQDLEDKASCSSPLLRLAWARIILDEAHNIKNPKVQTSIAVCKLRAGARWA
VTGTPIQNNLLDMYSLLRFLRCSPFDEYKLWKNQVDNGSRKGGERLNILTKNLLLRRTKD
QQDHLGRPLVLLPQRRSELHQLTLGEKEKAVYDVIFARSRSTLQNYLKRHEGGAHIRTQN
TDNPFERVANEFGPSQSEVSAPPGTQGSSTVHILSLLLRLRQCCCHLSLLKVALEQLELK
SEGLSLSLEEQLSALCLSEVQGPDPKSTVSLNGTNFPSELFEAESQSTKVSSLLSELQAI
RSSSQAQKSVIVSQWTSMLKIVAAHLKLIGLSYATIDGSVNPKQRMDMVEDFNNNPKGPQ
VMLVSLCAGGVGLNLVGGNHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCLGTV
EEKISQLQEKKKDLAKKVLSGNSATFTKLTLADLRLLFGV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaagaatatggacagtgacagttgcgtacaaccgtacagtaatggcttctcc
ccctccaggttatactatcgctgcgttaagagtaagagtgatgggaagaagtggtgcgga
cacgttccgtggcaggatccaaaccagaagactgttccgcactgtaagccgtcccagcat
cccacggaaaagccggagagaaacccctttaaggtcatcaatgaagatcccaggattggt
gtgtggagacggttcaatgaggagccaaaggccaaagcggaaaacccaaagaagtgcgac
caggagacatcacctggggccgatggtgggaaggttcatgatcataggagacagccacaa
gagagagaaccctctggggaggaaaggagacctgttctacagggtggtgtcatctccaag
gagaagtcttctgtagatacgaggaagccctctggggaggaaaggagacctgttttacag
ggtggtcccagctccaaggagaagtcttctgtagatacgaggaagccctctggggaggaa
aggagacctgttctacagggtggtccaagctccaaggagaaatcttctgtagatacgagg
aagccctctggggaggaaaggagacctgttctacagggtggtcccagctccaaggagaag
tcttctgtagatacgaggaagccctcaggggaggaaaggagacctgttctacagggtggt
cccagctccaaggagaaatcttctgtagatacgaggatgccctctggggaggaaaggaga
cctgttctacagggtggtcccagctccaaggagaaatcttctgtagatacgaggaagccc
tctggggaggaggaacacaagtctgcctgtgagaaggtcagtcatgtgctgggagagagg
gagatgtttggagaggctcaggaggaggagaggagtccacaccagggatggagggacaag
ccattacccagtggaatgaaagtgaagaagactgagcaggaatctgcacctgaggagaac
actgggagggtggtagaaacaccccaggaatgtgggccaaataccagggaaagcagcgcc
tcaaaggggcatgaggggaacggtgagacacaagccagtggtaccgcgaggcccactcac
actcacactcacactggctcacaagtcagaacagaaggtgcccagctcacagagagccac
accagcagcacccccagcccacaggcagagcggggccacagcgcccacgtaccccacaaa
caggaggaggaggatgttgtgtttgtttcctctatccctggaactgagaagccccccctg
gcccccccggctcggacatcgggtggcgggaaacagagaaccatcacctccttccctgga
ttcaaccaatcgcccgaggcccaaagcccctccgctctgcactcccagctcagcgctcaa
ctccaacagaaaaaggccaccctggctgcggtgaatctccaggcgctgccggaccgaggg
gtgaggctccttaaacaggtgcaggatctggaagatgccctgagctccctgtccctctgc
ccagagactgctgaggagaaagggagcagccaatcagaaatgagtctccccaaatctgcc
cccgaaaacccatttagtaaacctgggccagtggaatcggccgggggagtgaagccgctg
tccttccatgagctcccgcctatgtccctgggtctgcacgggtcagcgccgggcccgagc
cttagccagaacttcagcagcttatataaagtgagccccgagtggcaggccctgtatggg
gggcgtatgaccgaggagcgattgtttgccatacggaacgccaccagcgaggccatcgag
cacttgcacaagagcctggagtcctgccccagccccgactgcaccgtacaggatcccgca
gggctaaaggtaccgctgttactgcaccagaaacaggccctggcttggctgcgctggaga
gaggcccagaccccgcggggaggaattctggctgatgacatgggactgggcaagacgctg
acgatggtggcccttatactgatgcagaagcagcaacagaaccgcgagcaagagaagaag
ctggaggagtggatctccaaaaccgactccaccctcacagtcacccgtgggaccctcatt
gtgtgcccggcgtctctcgtccatcactggaagaaggaggtggagaagagagtgtcgggg
agcagactgcgagtttatctgtatcacggccccagccgggaaagggactgcagtgtgctg
gcagactacgacattgtggtgaccacgtacagcctggtgtccaaagagatccctgtgaag
aaggaggaaggggaggccccagccaaggaccaggacctggaggacaaggcttcatgctcc
tcccccctcctgcgcttggcatgggctcgcatcattctggacgaggctcacaacattaag
aatcccaaagtgcagacctccatcgctgtgtgcaagctgagagccggggcccgctgggct
gtgacggggacccccattcagaacaatctgctggacatgtattctctgctacggttcctg
cgctgctccccatttgatgagtacaagctatggaagaaccaggtggataacggcagcagg
aaaggaggggagcggctgaacatcctgaccaagaacctgctgctcaggagaaccaaggac
caacaggaccacttggggcgcccgctggtgctgctgccccagcgacgcagtgagttgcac
caactgaccctcggggagaaggagaaggccgtgtatgatgtcatattcgccagatccaga
tccactctgcagaattatctaaagagacacgaggggggcgcccacatacgcacccaaaat
acagacaaccctttcgagagagttgccaatgagtttggccccagccagtcggaggtctct
gcccccccgggcacccagggatccagcacggtgcatatcctgtcgctgctcctgcgcctc
cgccagtgctgctgccacctgtccctgctcaaggtggcgctggagcagctggagctgaag
agcgaggggctcagtttgagtttggaggagcagctgagtgccctctgcctgagtgaggta
cagggcccggaccccaaatccaccgtctccctcaatggcaccaacttcccctctgagctg
tttgaggccgagagtcaaagcaccaaggtttcctccctcctgtcagagctccaggccata
aggagcagctcccaggcacagaagagtgtcattgtgtcccagtggaccagcatgctgaag
atagtggccgcccacttgaagctgattggtttgtcctacgccaccatcgatgggtcagtg
aatcccaagcagcgaatggacatggtggaagatttcaacaacaaccccaaagggccccag
gtgatgctggtttccctgtgtgcggggggcgtcggactcaatctggttggcgggaaccac
ctcttcctattggacatgcactggaacccggcgctggaggaccaggcctgtgaccggatc
tatcgtgttgggcagcagaaagatgtggtgattcacaggtttgtttgcctggggacagta
gaggagaaaatctctcagcttcaggagaagaagaaggatttggccaagaaggttctgtct
gggaacagcgccaccttcaccaaactcaccctcgccgacctgcgcctgctgtttggggta
taa
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