Xenopus tropicalis (tropical clawed frog): 100486091
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Entry
100486091 CDS
T01011
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
SAM_2
Ank_5
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100486091
NCBI-ProteinID:
XP_031762025
Xenbase:
XB-GENE-1013268
UniProt:
A0A8J1JYC3
LinkDB
All DBs
Position
7:complement(110056165..110181851)
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AA seq
1939 aa
AA seq
DB search
MPQSPVSSEEERRSISGYPGEESDSDSSREDPVPGGKNNPTSATSNIPKPISLSSVAARR
IKERSMSVPDDSNFSMMVFRIGIPDLHQTKCLRFNPDATIWVAKQQILCTLNESLKDVLN
YGLFQPATNGRDAKFLDEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHT
KAGLKKFVEYVQHGSAEKVARLLDKGLDPNYHDSETGETPLTLASQLEGTVDVIRMLCLG
GAHIDFRSRDGMTALHKSVCARNYNALMTLLDLGGSPNHKDRRGLTPLYHTAMVGGDPRC
CELLLYNRASIGTVDENGWQEIHQACQHGHSQHLEHLLFYGADPASQNASGNTALHICAL
YNKESCARILLYRGASKDIKNHSGQTPFQVAVISGNFELGELIKSHRDSDVVPFQESPSY
AMHRREGGKALSVPHVLHRANSDNSLSLPDWMVFSASTANTVTLQGQKASGGTLRSSSSP
RGARSRSPSRGRHTEESKKQPRGRPSSSGPTKEPPANATTNHRSKRKLYSAVPGRTFVAV
KPYQSQGEGEISLSKGEKVKVLSVGEGGFWEGNAKGRTGWFPSDCVEEIPTKPQEGKQES
RSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFT
PTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNNLMV
KVVMVTRNPEMEDAMRKKVPQQKRVTPPAISLRSKSMTSELEEMVSPWKKKNDYEPPQNT
EKKRTVYQMALNKLDEILAAAQQTISVNESSSPGTLASMGASRAAGKGFFSAEPNFGQHR
VPSAQSMYERPSFLASNPSQAMMLRQKSIGAAEEDKPFLSTPSMKFNRSLSVPSSEDIPP
PPTTSAPDPPYNTAPSPSPRVSPGIRSNFNQSGDVRDVRDVRDVRDVRDVRDVKMYSPSM
RQDTSMYDQQMMEASQKREKMQLYHQDSDQGNEEQIRMGMASPANMRSWRSQAQEIRYFN
LPARAASTAMYVPPKAMHRKGQLVKQVKVENEQFEQQQQQLQQQLQQQQYQSHHQQQQQQ
VTKSHEKSSIPIPTIIIKAPSTSSSGRSSQGSSMEAENQPEPVPIPTLPPSDNMDFTSRF
GAAIVGAARRDREWFNEARRKSALFLSTDEDTEPTPAPRLKHSKSIDEGMFSSEPYMHLP
ANFGIPVNRDITGGYSYQPKTGKSYGSSTTSAFSTVCSTFIPQLQSSSSPLTMSSVNPAG
GVVTPLIHPLTGKILDPSSPLGLALAARERALKESQQHSRNEIEERKSRPCSPRFVEQQK
SSIDSQSSPTHRRWDSASVRKKEIDYKSCMMNTGGERKSDESSGHRSPALLLLQGVEQGK
AWEKRADGQEKIELHVRFMENSTHKEEEEQSKVAMVKVKHERPPPSPTVNHPTVSSTNCM
THESSSKENGLPLLVLPPPAPSIDVDDDFLFTEPLPPPLEFSNSFDKPDSPPGVSSGVNT
LPPPLPPAPPDSGITTALDSTTSSLTSYDSEVANLTQGTPEPKEPHVNFSSVVSSIQIPA
SDTIETVTDSGIEEIDSRSSSDHHLETISSVSTLSSMSGLSTEGTELLDTYITYLDGQAF
GAEKAVLQNKIRTRTFPSRTPGLLRDPITATSTTISISPCTENVFTLTPSQGPSLIAPSE
STKDSQRKSPTLPWEDYSQEKTSPVSAGKPTMITELSSKLQHMSGVSWSRSPESAVAFTP
ERPTSLQRHRIVDDSSASLISSKPVSSMFHNWPKSPQPPSKHPKSVDFDIRPSLRRAPSP
SALPTEHKISPTPRPSSLPILPSAPVYTGVFDLRGSPTAGGESFPSFQTGSRSLSPTHFI
LPPTEKPFASKPVHFWTKYDVADWLDYLNLGEHREHFLDNEIDGSHLPSLTKEDYIDLGV
TRVGHRMNIERALKFFIER
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgccccagagtcctgtgtcaagcgaggaggagaggaggagcatctctggataccctggg
gaagaatcagactcagacagttccagagaggaccctgtccctggagggaaaaacaatccc
acctctgccaccagcaatatccctaagcctatttcattatcttcagtagctgcaagaaga
ataaaagaaagatccatgtcggttccggatgactccaatttcagcatgatggtcttccgt
attggaattcctgacctgcaccaaacaaaatgccttcgattcaatccagatgccacaatc
tgggttgcaaagcagcagatactgtgcacattgaatgagagcctgaaggatgtgctgaac
tatggtctcttccaaccagcgaccaacgggagagatgctaagtttctggatgaggagcga
ctccttcgggaatacccccaatcttttgagaaaggggttccttatttggagttccgctat
aagacaagagtttacaaacagaccaacctcgatgagaagcagctggccaagctccacacc
aaggctggtttgaagaagttcgtggagtatgtgcagcatggttctgctgagaaagtggcc
cgcttgctggacaaaggcctagatcccaactatcatgattcagaaactggagagacccca
ttgacactggcttcgcagcttgagggaactgtggatgtcattaggatgctgtgcctggga
ggtgcccacatcgactttcgatctcgggatggcatgacggctttgcacaagtctgtttgc
gcccgcaactacaatgccctaatgaccctgttggaccttggtggttcaccaaatcacaag
gaccgccgaggcttaactccactttaccatacggctatggttggaggtgatccccggtgc
tgtgaattgttgctctataatcgagcttctattggtacagtggatgaaaatggctggcag
gagatccatcaggcttgccaacatggccactcacaacatctggagcatctgctgttttat
ggtgctgatcctgcttcccagaatgcttcaggcaacactgctctgcatatctgtgctctg
tacaacaaggaaagctgcgctagaattctgctgtaccggggggccagtaaagacatcaaa
aaccacagtgggcagaccccattccaggtcgcggtcatttcaggaaatttcgagctgggg
gagttaataaagagccacagagacagtgatgttgtacccttccaggaatccccctcctat
gccatgcatcgtagggaagggggcaaagcgctgtcggtgccccacgtcctccatcgagca
aacagcgacaacagcctctcactgcctgactggatggtcttctcagcgtctactgccaac
actgtcactctacagggacaaaaggcctcagggggaactctccgcagctccagtagccca
cgtggtgctcgaagccggtcaccttcaagaggccgacacacagaggaatccaagaagcag
ccacgtggacgacccagttccagtggtcctaccaaagagccccctgcaaatgcaaccacc
aatcatcgctccaagcgcaagttgtactcggcggtgccagggcgcacgtttgtggcggtg
aaaccctaccagtcgcaaggagaaggagagatatccctcagcaaaggagaaaaggtcaaa
gttctaagtgtgggagaaggaggattctgggaaggaaatgccaagggtcgcaccggctgg
ttcccatcagactgcgtagaagaaatacccacaaaaccacaggaaggaaaacaagagagc
cggagcgataaagccaagcgcttatttagacactacacggttggatcctatgacagcttt
gatgcccccagtgactacattatcaaagaaaagactgtgctgttgcagaagaaagacagt
gaaggatttggctttgtgctgagaggagcaaaggcacaaacccccattgaagagttcact
ccgacaccggcgtttccggccctgcagtatttggaaagtgtggatgaaggaggcgtggcc
tggagggcgggtcttagaatgggggactttttaattgaggtgaatggtcagaatgtggta
aaagtaggacatcgtcaggttgttaacatgattcggcaaggaggaaacaatctaatggtc
aaagtggtcatggtaaccaggaaccctgaaatggaagatgccatgagaaagaaagtgccg
cagcaaaagcgagttacaccacctgcaatttcccttcggtcaaaatccatgacttcagag
ctggaagaaatggtttcaccctggaaaaagaaaaatgattatgaaccaccccagaataca
gagaagaaaagaacggtgtaccaaatggcactaaataaactggatgaaatcttggctgca
gcccagcagacaatcagtgtcaatgagagctctagtccagggactctggcttcaatggga
gcatccagggctgctggaaagggatttttctctgcagagccaaactttgggcagcacaga
gtaccaagtgcccagtctatgtatgagaggccatcatttcttgcatctaacccctcacag
gccatgatgctacgacaaaagtccattggagccgctgaagaagataagccgttcttgtct
acaccttcaatgaaattcaaccgcagtctctctgttcccagttctgaagacattcctccg
cctcctacaacttctgcccccgatcctccatataacactgcgccctcaccttcaccaaga
gttagtccaggaataagatcaaactttaatcaaagtggagatgtaagagatgtaagagat
gtaagagatgtaagagatgtaagagatgtaagagatgtaaagatgtactccccatctatg
cgtcaggatacaagtatgtatgaccagcaaatgatggaggcatcgcagaaacgagaaaaa
atgcagctttaccaccaagactctgaccaaggaaatgaagaacagattcgcatgggcatg
gcctcaccagcaaatatgagaagctggaggtctcaggcacaagaaatccgttactttaat
cttcctgccagagctgccagtacagcaatgtatgttccaccaaaagcaatgcatcggaaa
ggacaactagtgaaacaggttaaagtggaaaatgaacaatttgaacagcagcagcaacag
ttacagcagcaactgcaacagcagcaataccagtcacatcaccagcagcagcagcagcag
gtcacaaagtcccatgaaaaaagttctattcctatccccaccattattattaaagctccc
tcaactagtagcagtgggcggagcagtcaaggtagtagcatggaggcagaaaaccaacca
gagccagtcccaatcccaactctacccccaagtgataatatggattttactagtcgcttt
ggagcagcaattgttggtgcagcacggcgggaccgtgaatggtttaatgaggcccgacga
aagtcagctctctttttgtccacagatgaagatacagaacccacgccggctccacgacta
aagcattccaaatctattgatgagggtatgttttctagtgaaccatatatgcacctccct
gcaaattttggaattcctgtaaacagagacattactggtggatactcttaccagcccaaa
actggcaagtcatatggttctagtacaaccagcgcttttagcacagtatgttctactttt
ataccacagctgcagtctagttccagtccactaacaatgtcaagtgtgaatccagcaggg
ggagtagtaaccccactaatccatcccttaactggaaaaattttagatcctagctctcca
cttggtcttgctttggcagcaagagaaagagctttgaaagagtctcagcaacatagcaga
aatgaaatagaagaaaggaagtctcgtccgtgctcacctaggtttgtggagcagcaaaag
tcgtcaattgactcccaaagcagccccacacaccgacgttgggattctgcatctgttaga
aaaaaggagattgattacaagtcttgcatgatgaatactggaggggagagaaaatcagat
gagagctctggacaccgatcacctgctcttttgttactgcaaggtgttgaacaaggtaaa
gcttgggagaaaagggctgacgggcaagaaaagatagagcttcatgtgcgtttcatggag
aactccactcataaggaagaagaagaacaaagtaaggtagccatggtcaaagtaaaacat
gagagacctccaccaagccccacagttaatcaccctacagtatctagcacaaactgtatg
acacatgaatccagttccaaagagaatggccttcccttgttagttttaccaccaccagcc
ccatctattgatgttgatgatgattttctgtttacagaacccctcccaccacccttagaa
ttttcaaacagctttgacaagcccgactctcctccaggagtatctagtggagttaataca
ctcccaccacctctgcctccagcccctcctgactccggcattaccactgcattagactct
acaacttctagcctcacttcttatgatagcgaagtagcaaacctaacccaggggacacca
gaacccaaagaacctcatgttaatttttcatctgttgtttcatccattcaaataccagct
tcggacaccatagaaactgtgactgactctggcattgaagagattgacagtcgaagtagc
agtgaccaccatctcgaaactattagtagtgtatctacattatcaagcatgtcaggtctg
tcaacagaaggaactgaacttttggacacctacataacttatctggatgggcaagcattt
ggtgctgaaaaagctgtccttcaaaacaagatccggacccggacattcccaagtagaacc
cctgggctactcagggatcccattactgccacaagtaccaccatatcaatttccccctgc
acagaaaatgtctttactcttactccctcacaggggccatcactcattgctccttcagaa
tccacaaaggacagtcaacgtaaatctcccactcttccatgggaggactattctcaggag
aagacatctcctgtctcagctggtaaacctaccatgatcacagaactaagctcaaaactc
cagcatatgagtggtgtttcatggtccaggtctccagaatcagccgtggcttttacacca
gagagaccaacttctttgcaaaggcacaggatagttgatgattcttcggcatctttgatt
tcttctaaaccagtaagcagtatgtttcacaactggcccaagtctccccagccgccttca
aagcatcccaaaagtgtggactttgatattcgcccttcgctgagacgagcacccagccct
tcagctttacccacagaacacaaaataagcccaacaccccgcccttcgtctctcccaatc
ctgccttcagcccctgtttacacaggggtctttgacctgagaggctccccaacagctgga
ggtgagtcctttcccagcttccaaacaggcagtcggtctctttcccccacgcattttatt
ctaccccctacagagaagccctttgcttccaagcctgttcacttctggacaaaatatgac
gtagccgattggttggactatttaaaccttggtgaacaccgagaacatttcctagacaat
gaaattgatggtagccacttaccttctttaaccaaggaggactacattgacctgggggtg
accagggtcggtcatagaatgaacattgaacgtgctctgaaattcttcatagagaggtga
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integrated database retrieval system
