KEGG   Xenopus tropicalis (tropical clawed frog): 100486145
Entry
100486145         CDS       T01011                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100486145 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100486145 (snrpa1)
Spliceosome [BR:xtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100486145 (snrpa1)
 Complex B
    100486145 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    100486145 (snrpa1)
SSDB
Motif
Pfam: LRR_9 LRR_4 DHU1_N LRR_8 LRR_14
Other DBs
NCBI-GeneID: 100486145
NCBI-ProteinID: XP_002939312
Xenbase: XB-GENE-1007226
UniProt: A0A6I8SPP8
LinkDB
Position
3:complement(115907805..115915578)
AA seq 255 aa
MVKLTADLIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDTIDCSDNEIRKLDGF
PLLKRLKTLLLNNNRICRIGEGIEHALPNLTELILTNNSITELGDLDNLSPCKHLTYISL
LRNPVTNKRHYRMYVIYKIPQVRVLDFEKVKQSEREEAANMFKGKRGAQLAKDIAKRSKT
FVPGAGLPTEKKKAGPSPGDVEAIKNAIANATTLAEVERLNGLLQSGQIPGKDHVLATSE
EAEEEMDEDVVTNGS
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtgaaactcacggctgatttgattgagcaggctgcgcagtacactaacgcggtgcgg
gaccgagagctggacctcaggggctacaaaatcccagtgattgagaatcttggggcaaca
ctagaccagtttgatacaattgattgttcagataatgagattagaaaactggatggattt
cctttattgaaaagacttaagaccctcctactaaacaataacagaatatgccgtattggg
gaaggtatagaacatgctttacctaatttaacggaattgattctcacaaacaacagtatt
acagagctgggtgacctcgacaatctgtcaccttgcaaacacctcacatacatcagcctt
ttgagaaaccctgtgacaaacaagcgacattacagaatgtatgtgatctacaaaatcccc
caggttcgggtcctggatttcgagaaagtaaagcagtcggagcgagaggaggcagcgaat
atgttcaagggcaagcgtggtgcacagcttgcaaaggatattgccaagagatcaaaaaca
tttgttccaggtgctggtttgccaacagaaaagaagaaagctgggccctcgccaggtgat
gttgaagccattaagaatgccattgctaatgcaactactctagcagaggtggagagactc
aatggtttgttgcagtctggtcagatacctggcaaagatcatgtgttggcaacgtctgag
gaagctgaagaagaaatggatgaagatgttgttacaaatggatcctga

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