Xenopus tropicalis (tropical clawed frog): 100486160
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Entry
100486160 CDS
T01011
Symbol
atg9b
Name
(RefSeq) autophagy-related protein 9B
KO
K17907
autophagy-related protein 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04137
Mitophagy - animal
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100486160 (atg9b)
04136 Autophagy - other
100486160 (atg9b)
04137 Mitophagy - animal
100486160 (atg9b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100486160 (atg9b)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100486160 (atg9b)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
ATG9 transmembrane protein
100486160 (atg9b)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100486160 (atg9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG9
Motif
Other DBs
NCBI-GeneID:
100486160
NCBI-ProteinID:
XP_002943059
Xenbase:
XB-GENE-6257562
UniProt:
F6VMF8
LinkDB
All DBs
Position
6:1408653..1424864
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AA seq
802 aa
AA seq
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MEEQEQFREYQRLEDFEEDSPPGEDDPLVHVPDAVKDSWHHIKNLDNFFTKIYHFHQKNG
FACMVLSDFFELIQFLFVVTFTTFLFHCVEYDVLFANKPVNHTHSGGAPERNKVTLADAI
LPAQQCALRIQESGWIIFLLVMAAIFWLYRLIKMFCSLLSYWEIRRFYIRALKIPSDELC
NFSWQEVQSRLISLQREQPMCVHKKELTELDIYHRILRFKNYMVAMVNKSLLPVRFRLPL
IGEATFLTQGLKYNMEFLFFWGPGSLFQNKWNLQPKYKRLGQRLELAQELNRTIVLLGLA
NLFLCPFILVWQILYAFFSYTEVIKREPGSLGARRWSLYGRLYLRHFNELTHELQARLSR
GYKPATKYMNSFASPLLAIAAKNIAFFAGSLLAVLIALTVYDEDVLTVQHILTAITVLGV
MVTVARSFIPDEHMVWCPEQLLQCVLAHIHYMPDHWQGHAHKSETRDELAQLFQYKAVFI
LEELLSPIITPFILIFSLRHKSLEIIDFFRNFSVEVVGVGDICSFAQMDIRRHGNPQWLS
EGQTQASVYQQAENGKTELSLMHFAITNPHWQPPLESSVFIGHLKEKVQQDAANAPPAQQ
ILCDAPICSSFLSNESGTAPDNLLASVLVHPVLTASGLPTRDRRFAQPTTTASAAASVLA
SLSGSQFSGRHLGANAHSSMYRSDQTLQQESMSQSDSQQKNMSRSSLFASEFASAEMSLH
AIYMHEVHQNQGITQRPLGMWQASELSPHQRQQTATRSGSRSGYRGLQLGGWEEEEQLHK
VDERSPPQAPSVGPSTSGSNSS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaggagcagtttcgcgagtaccagaggctggaggactttgaggaggactcg
ccacctggagaagatgatccgctggtacatgtgcccgacgctgttaaagattcctggcac
cacatcaagaacctggacaatttcttcaccaaaatctatcatttccaccagaagaatggg
ttcgcctgcatggtgctgtccgacttcttcgagctcatccagttcctcttcgttgtcacc
ttcaccaccttcctcttccactgtgtggaatatgatgttctctttgccaacaaaccggtt
aaccacacacactcaggaggtgcccccgagcgcaataaggtgaccctggctgacgccatc
ttacctgctcaacaatgtgccctcaggatccaggaaagtggttggatcatcttcctgttg
gtcatggccgccatcttctggctgtaccgcctcatcaagatgttctgcagcctcctcagc
tactgggagatccgcaggttctatatccgagccctaaagattccctcggacgagctgtgt
aacttcagttggcaagaagtgcagagccgcctgatttccctgcagcgggagcagcccatg
tgcgtgcacaagaaggagctgacggaactggacatctaccaccgaatcctccgcttcaag
aactacatggtggccatggtcaacaagagccttctccctgtccgcttccgcctgcctctg
attggcgaggccaccttcctaacccagggcctcaagtacaacatggagttcctcttcttt
tggggccctggctcccttttccagaacaaatggaacttgcagcccaagtataaacgcctg
ggtcagaggctggaactggcccaagagctgaatcggaccattgtacttctgggcttggcc
aaccttttcctctgccccttcattctggtctggcagatcctttatgccttctttagctac
actgaggtcatcaaaagggagccgggcagccttggtgccaggcgctggtcactttatggg
cgactctatttgcgccactttaatgaactgacccatgaacttcaggctcggctaagcaga
ggctacaagccggccaccaagtacatgaactcctttgcctccccgttgctggccattgcg
gctaagaacattgccttctttgctggttccctgctggctgttctcatcgcactgactgtt
tatgatgaagatgttctgactgtccagcacatcctgacggccatcactgtcctgggggta
atggtcacagtagccaggtccttcataccagatgagcacatggtgtggtgccccgagcag
ctcctgcagtgcgtcctggcacatatacactacatgcctgaccactggcaggggcacgcg
cacaagtccgagacccgggatgagttggcacaactcttccagtataaggcagtttttatc
ttggaagaactcctcagtcccatcatcactccattcatcctcatcttctccttgcgccac
aagtccttggaaattatcgacttcttccgcaacttctcggtggaggtggtgggagtcgga
gacatctgctccttcgctcagatggacatccggagacatgggaacccacagtggctttca
gagggccagactcaggcttccgtgtaccagcaagcagagaatggcaagaccgaactgtcc
ctgatgcattttgccatcacaaacccgcactggcagccccccctggaaagctctgtcttc
attgggcacctaaaggagaaggttcagcaggatgcggccaatgctccacctgcccagcag
attctgtgtgatgctcccatttgcagctccttcctatccaatgagtctgggacagcgcca
gataaccttttggccagtgtcctcgtccatccagtcttaactgctagtggcctgcctacc
agagaccggcgctttgcccagccaaccacaacagcctcagcggcggccagcgtgcttgcc
tccctttccggctcacagttttctggacgccatcttggcgcaaatgcccacagctcaatg
taccgcagtgaccagaccctccagcaggagagcatgtctcagagtgactcccagcagaag
aacatgtctcgctcctctctctttgcctcagagtttgcctctgctgagatgagtctgcac
gccatatacatgcatgaggtgcaccagaatcaaggaatcactcagcgccccctagggatg
tggcaggcttctgagctctcaccccatcagaggcagcagacagcaacgagatcgggttct
cggtccggatatcggggtctgcaactcgggggttgggaagaggaggagcagctgcacaag
gtggatgagaggagccccccccaggcaccttctgtgggacccagcacaagtggcagcaac
agcagctaa
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integrated database retrieval system
