Xenopus tropicalis (tropical clawed frog): 100486218
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Entry
100486218 CDS
T01011
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
xtr04621
NOD-like receptor signaling pathway
xtr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100486218 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100486218 (tank)
04622 RIG-I-like receptor signaling pathway
100486218 (tank)
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Gene cluster
GFIT
Motif
Pfam:
TBD
Tubulin_2
Lebercilin
SKA1
Motif
Other DBs
NCBI-GeneID:
100486218
NCBI-ProteinID:
XP_002933307
Xenbase:
XB-GENE-483297
UniProt:
A0A7D9NLZ9
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Position
9:complement(72394418..72441786)
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AA seq
486 aa
AA seq
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MEINIGEQLNKAYEAYRQACMDKEQAVKQMQQKLDVCEQQLHDQTKQIASLKNCITVLTS
QSSTAIGPGKGGTHAPPQSPKPGSTEGWRNEAANSFSYEHLQEELNVSMQREKHYKEQLD
NERFKLRKLEESQKAFDSIVLKKNDEIRVLKNRLKSANERHEAEDYRPTPTHEGEVKSKT
LQDPAGAGSAPVYTRQGMEHIFSEMKEEFSQICRLTRKQSLQLNTLLSKKENSPDIPLQC
SMPIQCTDEPHEEEQDMAINVKSDKSPFGSMTPRGLGGDDESILVESLSDLSVKFPPNDD
DSEFLQSAPEKIPILCPVLTQLPSQLHTQAPVLSTTQPNTTDTRCLAGVPCNLENIKHPD
LGNNYRGSNLQTSEDSDLLQAVNSPVRKYTNTFYSPDILDAPESAETTGMIVRGPQQAVW
KPVLHQEKDLSAPGSRKWDQNSSDVCEFCKAVFPSAMRSHEDFFRHLNSHFKDGQPRTNF
LEQQKH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaacattggagagcagctcaacaaggcctatgaagcgtatcgtcaggcatgc
atggacaaagagcaggctgtgaagcaaatgcaacagaagctggatgtttgtgaacagcaa
ctccatgatcaaactaaacagattgccagtcttaaaaattgtatcactgtgctgacatca
cagtcctccactgctattggcccagggaaaggtggtacccatgccccaccgcagtctccg
aagccgggaagcactgagggctggagaaatgaggcagccaatagtttttcatatgagcat
ctccaagaagagctgaatgtttccatgcagagagagaagcactataaggagcaactggac
aatgaaaggttcaagctgaggaaactggaggaatcccagaaggcctttgattcgattgtg
cttaagaaaaacgacgagatcagggttttgaaaaatcgattgaaatcagccaatgaaagg
cacgaagcagaagattacaggccgacgcccacccatgagggagaggtgaaaagtaaaaca
ttgcaggatcccgctggcgctggctctgcccctgtctacaccaggcaaggaatggaacac
attttctcagaaatgaaagaggaattcagtcagatttgcaggctaacgagaaaacaaagc
ctacagctcaatacgcttctgtcgaagaaggagaattcccccgatattcctctacagtgt
tccatgcctattcagtgcacagatgagccccacgaggaagaacaggacatggccatcaat
gtcaaaagcgataaatcgccttttggatctatgaccccacgtggactgggaggagacgac
gagagcattttagtagaatccctctcagacttaagtgtcaaattcccaccaaatgacgat
gactctgaattcttacaaagcgcccctgaaaagatacccattctgtgtcctgttttaact
caacttcctagtcagttacacactcaggccccggttcttagtacaacgcagccgaacaca
acagatactcgctgtttagcaggagtcccttgcaacctggaaaatataaaacatcccgat
ttggggaataactaccgaggcagcaatttgcaaacctccgaggacagtgaccttcttcag
gctgtcaacagcccagtgaggaaatacacaaacactttctatagtcctgatatcttggat
gctcctgaatcagcagaaacaacaggaatgatagtcagagggccacaacaggctgtttgg
aagccggttctgcatcaagagaaggacctttcagctccaggttccagaaaatgggatcag
aacagctctgacgtgtgtgagttctgtaaggccgtcttcccctctgcaatgaggtctcac
gaggacttttttaggcatcttaattcccattttaaggatggacaaccaagaacgaacttc
ctggagcagcagaaacattga
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integrated database retrieval system
