Xenopus tropicalis (tropical clawed frog): 100486223
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Entry
100486223 CDS
T01011
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04217
Necroptosis
xtr04620
Toll-like receptor signaling pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100486223 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100486223 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100486223 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100486223 (tlr3)
04090 CD molecules [BR:
xtr04090
]
100486223 (tlr3)
Pattern recognition receptors [BR:
xtr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100486223 (tlr3)
CD molecules [BR:
xtr04090
]
Proteins
100486223 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
TIR
LRR_9
TIR_2
Tlr3_TMD
LRR_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
100486223
NCBI-ProteinID:
XP_002934448
Xenbase:
XB-GENE-491049
UniProt:
A0A6I8SII1
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All DBs
Position
1:complement(44170821..44189996)
Genome browser
AA seq
897 aa
AA seq
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MGQLWLSLHILYAIYGMSLVAGNPCKITEDLTADCSHLKLSAIPSDLPRNIKALDLSHNQ
LKKLPAANLSVYDQLERLDAGFNTLHQFEPALCKQLLMLKTLNLEHNEFTKISENDFTFC
VHLSELHLASNGISNIDGNPFEKLENLLFLDMSHNKMISTALGNKQQLNNLKELYLNSNK
ISKLNKEAFEFLANTSLQKLDLSSNPLTEINPGCFQAIGSFAALVIQNTQLDPQRTEQVC
SELAHTGVRNLTLNNIRLSKIRNTTFKGLADTNLTVLDLSGNSLSQIDNDSFVSLGALEI
LNLENNDISHVNPKTFNGLSKVRVLNLRKSLSSNLKLDDLSFQSLHNVQYLNMEANKIIS
ITEHTFIGLTSLTNLSLSDSTLQQHTLTNRTFLSLSKSPLYHLNLTKTGLTKIENGAFLC
LKHLQLLDMGLNQIDQEVSGNELEGLANIEMIYLSYNRRITLTSNSFIFAPSLSKLYLRK
TALTFRDLNPSPFKVLQNLTVLDLSNNNIANIQEDVFESLSNLRILSFEHNNLARLWKEA
NPGGPVLFLKGLKNLEKLSLLSNGFDEIPANAFKGLCKLKVLDIGENNVYILPPSVFDDQ
HSLTLLDLHKNLITSVEQDLFKNVFSSLKYLNMGGNPYDCTCESIAWFASWLNTTNTSVP
LAHSQYICNTPARYHGNPVDNFDSSPCKELAPFRLFVSTFSLMLVFILSVLLIQFQGWRI
HFYWTVSINRILGFKEIDPRKRNFDYDAYIIHAQNDVSWVENHLIPLEKNAGSKLQFCFE
ERDLEAGTSTLSAFVDCINRSRKIIFVVTRNLLNDSWCRRFKVQHAFQQAIEQNRDSIIL
IFLEDIPDYKLYHTIHLRRGMFKSRCILDWPDQMERIKTFYQRLKIALGSTNLVNLL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggacaattatggctttctctacacatattgtacgcgatttatgggatgtctctggtg
gctggaaatccatgtaagatcacagaggacctcactgctgactgcagtcacttgaaactt
tctgccatcccttctgatctcccaagaaacattaaagcactagacctctctcacaatcaa
ctaaagaaactgcctgctgccaatctttctgtatatgaccaacttgagagactcgatgct
ggatttaatactcttcatcagtttgagccagccctgtgtaaacagcttctaatgctgaaa
accttgaatttagagcataacgaatttacaaagatctcagaaaatgattttaccttttgc
gtccacctaagtgagcttcatctggcttccaatgggataagcaatattgatggaaaccct
tttgaaaagctagagaatttactctttcttgatatgtcccacaacaaaatgatatccacg
gccttaggaaataagcaacagctgaacaatctgaaggaactctacttgaattctaataag
atttctaagctaaataaagaagcatttgaatttctggctaacacctccctccagaagctt
gacttgtcttcaaaccctttgacagagatcaatccaggttgctttcaagcaattggaagt
tttgctgctcttgtcattcaaaatacgcaattggaccctcagcggacagaacaggtctgc
tcagaattagcgcacactggagttcgcaaccttacgctaaataatataagactttcaaaa
atacgtaatacaacctttaaaggattagcagacacaaatctaacagtgctggacctttca
ggaaacagtttgtcacaaatcgataacgattcatttgtttcccttggtgcattagaaata
ctgaacttagagaataatgacatttctcatgtaaaccccaaaacatttaatggtttgtca
aaggttagagttctgaatctaagaaaatctttaagttcaaatcttaaacttgatgaccta
tcatttcagtcgttgcacaatgtgcaatacttaaatatggaagccaacaaaataatttcc
attacggagcatacttttattggtctaacaagtttaaccaatttaagcctaagtgactcc
acattacaacagcatacacttaccaacagaacatttttatcgctgtcaaagtcacctttg
tatcatctcaacctcaccaaaactggattgaccaaaatagaaaatggagcatttttatgc
ttgaagcatctgcagctacttgatatggggctcaaccagatagatcaagaagtttctggt
aatgaattagaaggccttgctaatatagaaatgatttatctctcctacaacagaagaatt
actctcacaagcaattctttcatttttgctccaagcctcagtaagttataccttagaaag
acagccttaacattcagagacctcaatccttcacctttcaaggttctgcagaatttaact
gttttggatctcagcaataataacattgcaaacatacaagaagatgtctttgaaagtctt
tccaatttaagaattcttagttttgagcacaacaacctcgctcgactgtggaaagaggct
aatcctggtgggcctgttttgtttttgaagggattaaagaacttggagaagctcagtttg
ttatccaatggctttgatgagataccagctaatgctttcaagggactttgcaaactgaag
gttttggacattggagaaaataatgtttacatactgcccccatctgtgtttgatgatcaa
cattcgcttactttattggatctccataaaaatcttataacatcagtagaacaagattta
tttaaaaatgtttttagtagcctgaaatatctaaacatgggtggaaacccatatgattgt
acttgtgaaagtatagcttggtttgcaagttggcttaatacaactaacacaagcgtccca
cttgctcactcacaatatatatgcaataccccagcccggtaccatggaaatcctgtagat
aattttgatagctctccctgcaaggaactggcaccttttcgactctttgtatctacattc
agccttatgctggtttttatattgtcagtcttactaatacagtttcaaggttggcgaata
catttttattggacagtatccatcaacaggatccttggctttaaagaaattgatccgagg
aaaagaaactttgattatgatgcttatattattcatgcccaaaatgatgtttcctgggtt
gaaaatcatttgattccacttgaaaagaacgccggcagtaagttacagttttgctttgaa
gagagggaccttgaagctggcacgtcgactctgtctgcctttgtcgattgcataaaccga
agtagaaagattatttttgttgtgacacgaaatttgttaaatgattcttggtgcaggagg
ttcaaggttcaacatgctttccagcaagccatcgaacaaaaccgtgattccattatactt
atattccttgaagacatcccagattacaaattatatcacaccattcacctaagaagagga
atgttcaagtcacgttgcatattggattggccggatcaaatggaaagaataaagacattt
tatcaaagacttaaaattgctctgggatcaacaaacttagtcaacttactttaa
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