Xenopus tropicalis (tropical clawed frog): 100486259
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Entry
100486259 CDS
T01011
Symbol
sema4c
Name
(RefSeq) semaphorin-4C isoform X2
KO
K06521
semaphorin 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xtr04090
]
100486259 (sema4c)
CD molecules [BR:
xtr04090
]
Proteins
100486259 (sema4c)
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Paralog
GFIT
Motif
Pfam:
Sema
PSI
Ig_SEMA-3_4_7A
Ig_3
I-set
Ig_Sema4F
Lys_Orn_oxgnase
PSI_integrin
Ig_2
Motif
Other DBs
NCBI-GeneID:
100486259
NCBI-ProteinID:
XP_002932613
Xenbase:
XB-GENE-856519
UniProt:
A0A6I8SFQ9
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Position
3:complement(125306819..125334820)
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AA seq
836 aa
AA seq
DB search
MAMFPSCFFVLALLLRAEAWEWELTPRKTVRYHGVSVVRQSWRNGVSQVMTLTLDEDRGA
LYVGAREVIFSLDLSNIGKELRPPIIWQAPADKKAECAQKGKSNQTECFNYIRFLEEYNQ
THLITCGTYAFQPKCAYIALSGFTLDADNLEEGKGKVPYDPAKGYTGLILDGALYSATMN
NFLGTEPVIMRIVGQHNIMKTEYLASWLNEPNFVSSAHMPESVGSEIGDDDKIYYFFTER
ALEYDCSSEQVVSRVARICKGDLGGARTLQRKWTSFLKARLLCSIPELQLNFNLLKSVFK
LEAEEWRSTQFFAAFQARWGDSPVSAVCQYSIHDIQKVFDGPYKEYREQSQKWGRYSDSV
PSPRPGSCITNWHRNHGVYSSLELPDNTLNFVKKHPLMDDTVMPSQGRPLLVRRGINFTT
IAVQRTLGLDKEPYDVLFIGTDNGWVNKAVSFGSTVHIIEELQVFDKSYPVNSLAVSSRK
SLLYVGSQSGLVQLPFADCSKYRSCADCILARDPYCAWNVNISRCVRADEQHRSVLLQDI
QDSDTSVCEVQNMNAVRYFSKNITIGIGTNVVLPCQLSSNLAEPIWTFDGQDMGSDQDDS
VLFDATLQALVILGVGTHHSGSYVCFSEEQGTRLTSENYQLTVVASPSLILESRAPLDGL
GLVWMMVIALGAVCLALFLAVVYLRRKLKDELEKGSKSMENTLVYPIKLPSQPKTPKCLP
SADSDEKLWDPSSFYYSDGSLKIVPGHALCQNSTGSSSPSGNGIPGQPLPSPPLHSPNHM
LLAGVRGSSSNGYIRLTLGGGVAEEHPQLGDLNEELRWKLKQRQALPDSNPEESSV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtttcccagctgcttctttgttctggcactgctgctccgagctgaggcctgg
gaatgggaactgactccgaggaaaaccgtgcgctaccatggggtgtcagtggtgcgacag
tcctggcgcaacggagtctcccaagtcatgacactgacgttggatgaggatcggggggct
ctgtatgtgggagcaagagaagtcatatttagcttagacctcagtaacatcggcaaagag
ctgaggcctccgattatatggcaagctccagcagacaagaaggcagaatgtgcccaaaag
ggaaaaagcaatcagacagaatgttttaactacatccgcttcctggaagagtacaaccag
acacatctcatcacttgtgggacgtatgccttccagcccaagtgtgcttacattgcactg
tctggattcacactggatgcagataacttggaagaggggaaggggaaagttccatatgat
ccagccaagggctacactgggcttattttagatggagccctgtactcagccaccatgaac
aacttccttggaacagagcctgtgattatgcgcattgtggggcagcataatataatgaag
acagagtatttggcatcatggctgaatgaaccaaactttgtgagctcggcgcacatgcca
gagagtgtgggcagtgaaattggggacgatgataagatatactactttttcaccgaacgg
gctctagaatatgactgctccagtgagcaagtggtatccagggtggcacgtatctgcaag
ggggatttaggaggggctcgtactctgcagaggaagtggactagtttcctcaaagcccgg
cttctttgctccatcccagagcttcagctgaattttaaccttttaaaatctgtatttaag
ctagaggccgaagagtggcgctccactcagttctttgctgccttccaggctcgctggggt
gattctccagtgtccgctgtctgtcagtattccatccatgacatccagaaggtctttgac
ggaccgtacaaggagtaccgtgagcaatcccagaagtggggtcgatactctgactctgtg
cccagtccccgaccaggatcatgtatcaccaactggcacaggaatcatggagtgtacagc
tctctggagcttcctgacaatacccttaactttgtcaagaagcatccgctaatggacgac
actgttatgccttcccaaggacgtccattgctggtcagaaggggaataaacttcacaacc
attgcagtgcagaggaccttgggtttggataaggagccttatgatgtcctcttcattgga
acagacaatggttgggtaaataaagctgtgagctttggatcaacggtgcacataattgag
gagctgcaagtatttgacaaatcctatcctgtgaacagcttggccgtttcctcccgcaag
tctcttctgtatgtgggctcacaatctgggctagtgcagcttccctttgcagactgcagt
aaataccgctcctgtgctgactgcatacttgctcgagatccctactgcgcctggaatgtt
aatattagccgctgtgtgcgtgccgatgaacagcacaggtctgtactccttcaggatatt
caggactccgacacatcagtatgtgaggtgcagaacatgaatgcagtgagatacttttca
aagaacattactattggaattgggacaaacgtggtccttccttgccagttatcctctaac
ttggcagaacctatctggacattcgatgggcaagacatgggaagtgaccaggatgattct
gtcctctttgacgccactctgcaggcactggtcattcttggcgtgggcactcatcattct
ggttcctacgtctgtttctcagaagagcagggaacccgactgacttcagagaactaccag
cttactgtggtggcctcgccttcccttattcttgaatctcgtgctcctttggatgggctg
ggcctggtgtggatgatggtgatagcactgggggctgtgtgcctggcccttttcctagct
gttgtctacctgcgcaggaagttaaaggatgagctggaaaaaggttccaaatctatggag
aacacattggtatatcctatcaaattgccttcccaacccaagacacctaagtgcctgcct
agtgcagactctgatgagaaactgtgggacccttcctctttctactattctgatggttca
ctgaaaattgtacctggtcatgcattgtgccagaacagcactggctcctcctcgccttct
ggaaatggtattcctgggcagcctcttccttcacctcccctgcattcacccaaccatatg
cttttagcaggggttcggggctcaagtagtaatggttatatccgactgacacttggaggg
ggagtggctgaggagcaccctcagctgggggaccttaatgaggaacttcggtggaagcta
aagcagaggcaagcattaccagactccaatccagaagaatcatctgtttga
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