Xenopus tropicalis (tropical clawed frog): 100486266
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Entry
100486266 CDS
T01011
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100486266 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100486266 (taf6l)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100486266 (taf6l)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100486266 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
100486266 (taf6l)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100486266 (taf6l)
STAGA complex
100486266 (taf6l)
TFTC complex
100486266 (taf6l)
SAGA complex
100486266 (taf6l)
SLIK complex
100486266 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
100486266
NCBI-ProteinID:
XP_002933255
Xenbase:
XB-GENE-1000128
UniProt:
A0A7D9NLV2
LinkDB
All DBs
Position
8:87775909..87787737
Genome browser
AA seq
574 aa
AA seq
DB search
MSHTEDRRYVELCQDSVRLTAESVGLDITDEVAALLAEDVCYRLRELTQFSAQCLRHSRR
RRLTVEDFNRALRWSNVEAVCGHGSPDSVTYRSIKDGDCHYTEDREINLVELALATNIPK
GTPETAVRVHVSYLDGKGNLEHQGTVPAAVSLLTDDLLKYYQRVTRAVLGDDPHLMKVAL
QDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLSRLLQLVRSLLWNPFLYLGYYGCSLMQ
SVLYCVTEPLAASINPLNDHWTLRDYGAGLLSLIWTHQDLAGSLYPQILQSLQKVLGDPV
RPLCSHYGAVVGLHALGWKAVEQILYPLLPTYWAGLQTVLDDHSMSNAQVKADGHKVYGA
ILVAVERLLKMKARSSDLTSSVAPSLDNPSICSPPSVPLLEMYRELYCFFGDSLAVRFGT
GGNQSHHGGAPQNTQEPKKECTGDGTRKMPQLTAHGEEEAVTVGKQCQRPTQTQMSAASR
PRGTSRQGQRTQGVREAFQRSRLTPRGTPRFTFLIGGRQAGRGGGGRRFQSVFQLHTGPG
ATASRYAQKLPMIGRVTRAGRRVAQAELSLYLPL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacacagaagaccgaagatatgtagagctgtgtcaggattcagtacgtttaaca
gcagagagtgtgggtctggatatcacagatgaggttgctgcattacttgctgaagatgta
tgctacagactccgagagcttacccagttcagtgcacaatgtcttagacactcacggagg
cgcaggctgacagtggaggattttaaccgggctttgcgatggagcaatgtggaggcagta
tgtggccacggatcaccagattcagtaacttaccgcagtattaaagatggagattgccac
tacactgaggaccgagaaatcaacttggtggaattggcactggcaacaaacattcctaaa
ggcacaccagagactgccgttcgagttcatgtctcatatttggatggcaaggggaacttg
gagcatcagggaacagttcctgcagcagtctcacttctgacagatgacctactaaagtat
taccagcgtgtcacacgagctgtgctaggggatgacccacacctcatgaaggttgctctt
caagatttgcagacaaattcaaagattgctgcccttttaccatactttgtttatgttgta
agtggggtgaaatctgttagtcatgatctggaacagctgagtcgcctcttacagttggtg
cggtctctactttggaacccctttctgtacctgggctactatggttgcagtcttatgcag
agtgtcctttactgtgtcacagagcctcttgctgcttctattaatccactcaatgaccac
tggaccctgcgagactatggggctggtcttctcagccttatttggactcatcaagattta
gccggttcactgtatccacaaatattgcagtctctacagaaagtgctaggggaccctgtt
cgtcctctctgctctcattatggagctgtagtgggactgcatgccttaggatggaaggca
gtggagcaaatattgtatcctctcctccctacctattgggctgggttgcaaactgtgtta
gatgatcattccatgtctaatgcacaagtcaaagcagatggacacaaggtgtatggagcc
attctagtggcagtagaacgtctcctcaagatgaaagctcgttcatctgatttaacttca
tctgttgcaccttcgttagacaacccctcaatctgctcacccccctctgtacccttacta
gagatgtaccgtgaactgtactgcttctttggagacagcctagctgtgcgttttggaaca
ggaggaaaccaatcacatcatggtggggcaccacagaacacacaggaacccaaaaaagaa
tgtactggggatgggacaagaaagatgcctcaactcactgcccatggagaagaagaagca
gttactgtgggaaaacaatgtcagcgccccactcagacgcagatgtctgctgcatctagg
cctagagggacatccagacaggggcagagaacacaaggtgtaagagaagcattccaaaga
agtagactgacaccccgtggaacaccacgttttactttcttaatagggggaagacaggct
ggaagaggtggaggaggacgcaggtttcaaagtgtcttccagttgcatacaggtcctgga
gctacagcttctcgctatgcccaaaaattgcctatgataggaagagtgaccagagctgga
cgaagggtagcacaagcagaactttcactctatctgccattgtag
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