Xenopus tropicalis (tropical clawed frog): 100486277
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Entry
100486277 CDS
T01011
Symbol
sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100486277
NCBI-ProteinID:
XP_002937315
Xenbase:
XB-GENE-989787
UniProt:
A0A8J0QSJ7
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Position
8:complement(137434537..137580177)
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AA seq
1043 aa
AA seq
DB search
MYQVLLRGVLLLVCTYLSSALVFPKDLTPIRIIETLTTSSYPWFRGLASDDDTAHLGLDF
QKMLKLNQTLFVAARDHVYAIDLRRAKEAIIPDKYVTWKTQDMENCAMRGKLRDECYNYI
KVLVPKNDQTLVACGTNSFNPMCRSYKIKTLEQEGEEFNGQARCPFDAKQANVALFADGN
LYSATMADFQASDAVIYRSLGEKSPVLRTVKYDSKWLREPHFIHAVEYGNYVYFFFREIS
MEYTTIGKVTFSRVGRVCKNDMGGSPRVLEKYWTSFLKARLNCSVPGDSFFYFDVLQSVS
DILTINNRPAVIGVFGTQANSITGSGVCAYYMDDIEKVFNGKFKEQKTTESAWTPIPEDK
VPTPRPGCCAGYGKAATYKTSNEFPDETLSFIKSYPLLDEAVLSITETPWFTKTTSRFKL
THLAADTSAGPYGNYTVLFLGSEDGKVLKVLSGTTENSTVETLLLEDINVYNPAKCNVKK
EDRRILGLQLDRENHALFVAFSSCIIRVPLSRCELYGTCRRSCLASRDPYCVWLKSGACA
SYRNDIRGSFEQDIEQSKNWGNCQDVVTSSGSVGNEGDSAYGKAPPSGDIAIASVASLGH
VTRLGYSPPGVTSDGYYQLSAWHTLKTQGVRQEVGSMESSKSVHFTFLIGCVFVAFVVGA
IFSGLFVSCYCNHMFQKNKHVGRDPESSLQRPLSLRSLAKMNGLLESQSKEGRMEPTSPK
LYTTLLHGEKEQTTETTKGESKDHPELSGLPTPESTPELPMKNLKAFKNQWERNQNCNNA
KEIQGKSPVFHFPVSNSQVFQFPSTLVLPTNMHGYDQPLSGYGDDKKIPNSERALIRHSQ
CYLPKGVEMTTLDELLKHLPESSGSPRKMSGMMAISPQAVSPHSPMSFINKVQPKIPDTE
SAPYYSSSTLPRDSLPRRLDIPPDVTPQSCLEKQSRSQRHSLSSGHKLMNIGPGGPILSR
QHSLGQGNRQHPPPPLLTRMHSTGTPVPMESHSVFLSRQLSYQEQTPMSRSMVKRTLSLR
PDVPSNSVFLPSSPVKDAAQFKY
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaagtgctgctccgtggggttcttctccttgtctgcacttacctgtcctctgcc
ctggtgttcccaaaggacctgacgcctattagaatcatagagacattaaccacttcttct
tatccatggtttcggggactggccagcgacgatgacacggcccacctaggacttgacttt
cagaagatgcttaaactgaaccaaacactatttgtagctgcaagagaccatgtttatgct
atcgatctgcgcagagccaaagaagcaattattccagataaatatgtaacgtggaagacc
caagatatggagaactgcgcaatgagaggcaagctgagggatgagtgttacaactacatc
aaggtcctggtccccaagaacgaccaaactcttgtggcgtgtggcaccaactcatttaac
cccatgtgcaggagctacaagatcaagactcttgagcaggaaggggaagagttcaatggt
caggcccgttgcccttttgatgcaaaacaagccaacgtcgccctttttgcagatgggaat
ctgtactctgcaacaatggcggacttccaggccagcgacgctgttatataccgcagcctt
ggggagaagagccctgtcctccggaccgttaaatacgactccaaatggctcagagaacct
cattttatccatgcggtggaatatggaaactatgtttatttcttcttccgggagatttcc
atggaatacaccactatcggcaaggtgaccttctctcgcgtcggccgtgtctgtaagaac
gacatgggcggctcccccagggttctagagaagtactggacctcgttcttgaaagcccgc
ctcaactgttcggttcctggcgactccttcttttatttcgacgtgctccagtccgtcagt
gatatccttaccatcaacaaccgtccggcagtcattggggtgtttggcacccaggccaac
agtattactggttctggggtctgtgcctactacatggatgatattgagaaggtgtttaat
gggaagtttaaggaacagaagactacagaatctgcatggaccccgattccagaagacaaa
gtccctactccaaggcccggctgctgcgctggatatggaaaagcagcgacctacaagacg
tcgaatgagtttcccgatgagaccctctccttcatcaaatcctatcctctgctggacgag
gcagtgctctccatcaccgagacaccctggtttacaaaaacaaccagcaggtttaagctg
acccacctagctgctgatacctcagctggaccttacgggaactataccgttctgttcctg
ggttccgaggatgggaaagtcttgaaggtcctctccggtacaaccgaaaactctacagtg
gagacgcttctgcttgaagatattaatgtctacaacccggctaagtgcaacgtcaaaaag
gaggacaggaggattctgggactgcagctggaccgggagaaccatgctttgtttgtagcc
ttctcgagctgcatcatcagagtgcccctgagccgctgtgaactgtacggcacgtgccgg
aggagctgtctggcgtccagagatccttactgtgtttggcttaaatccggagcctgtgcc
agctaccgcaatgatataaggggtagctttgagcaggatatcgagcagtcgaaaaactgg
ggcaactgccaagacgttgtcacctcttcaggaagcgtcggcaatgaaggggactcggct
tacgggaaagccccgcctagcggtgacatcgccattgcaagtgtcgcctcccttgggcat
gtgacccgcctgggctattccccgccaggcgtgacatctgacggttattaccaactctct
gcctggcacactctaaaaacccagggagtgcgccaggaagttggatccatggaaagctcc
aagagtgtccattttactttcctcattggctgcgtctttgttgcgtttgtggtgggagcc
atattttccggcttgtttgtgtcctgctactgcaatcacatgtttcagaaaaacaaacac
gttggacgagaccctgaatcgagtctccaaagacctctctccttgagaagcctggcaaag
atgaacggccttttagaaagccagtctaaagaaggaaggatggaaccgacatctccaaag
ctttatacaacattgcttcacggtgaaaaagagcaaacaaccgagacaactaaaggggaa
tcaaaagaccaccctgaactgtctggccttcccactccagaatccacaccagaactgccg
atgaagaacttaaaggctttcaagaaccaatgggaaaggaaccagaactgcaacaatgcc
aaagagattcaggggaaaagccctgtatttcactttccagtttcaaattcccaagtgttt
cagtttcccagtactctggtcctacccaccaacatgcacggatatgaccagcctctctca
ggctacggagatgataagaagataccaaattctgaacgagctctaattaggcattcccag
tgctatcttcctaaaggtgttgagatgaccacactggatgaacttctgaagcaccttcca
gaatctagtgggtcgccgaggaaaatgtcaggcatgatggccataagcccacaagctgtg
agtcctcattcgccgatgtccttcatcaacaaggttcagcctaaaatccccgacacggaa
agtgcaccttattatagctcctctacccttccaagagacagtctgcctagaagactggac
ataccaccagatgtgacgcctcagtcttgcttggagaaacaatcaagatcacagaggcat
tcattatcttcaggacataaactaatgaacattggtccaggtggaccaattctttcgaga
cagcacagcctgggtcaaggtaatagacaacacccaccaccaccactcctgacaaggatg
cattctactggtactcccgtacccatggaaagccacagtgtctttctgtctcgccagctt
agttaccaggaacaaactcccatgtcaaggagcatggtgaaaaggaccctgtccttaaga
ccagatgtgccatccaattcagtatttttgccatcctcgccggtgaaggatgcagcccag
tttaagtattaa
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