Xenopus tropicalis (tropical clawed frog): 100486389
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Entry
100486389 CDS
T01011
Symbol
lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100486389 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xtr04030
]
100486389 (lgr5)
G protein-coupled receptors [BR:
xtr04030
]
Rhodopsin family
Others
R-spondin
100486389 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_6
LRR_Zer-1
LRR_R13L1-DRL21
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
100486389
NCBI-ProteinID:
XP_002940219
Xenbase:
XB-GENE-994091
UniProt:
F7D3V9
LinkDB
All DBs
Position
3:59770998..59878272
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AA seq
902 aa
AA seq
DB search
MDTSKTSFFLFSVLCSLQLVGAARPGKQQRSCPTPCECEQEGMLVRVDCSDRALTSLPRN
LSIFTSYLDLSMNNITNLPSNVMHNLHFLEELRLAGNDLTYIPKGAFAGLGSLKVLMLQN
NLLRQVPSEALHNLRSLQSLRLDANHISYVPPSSFNGLFSLRHLWLDDNSLTEIPVRALE
SLSALQAMTLALNKIHHIPDYAFRNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNY
NNLDEFPAAIKTLKNLKELGFHSNNIKSIPEQAFIGNPSLITIHFYDNPIQHVGRSAFQH
LPELRTLILNGASQITEFPDLTGTTSLESLTLTGAQLVYLPSAVCTQLPNLQVLDLSYNH
IKDLPSFSGCQRLQKIDLRHNEVYEIRSTTFQQLVGLRSLDLAWNKIAVIHPNSFSSLPS
LIKLDLSSNHLTSFPVTGLHGLTHLKLTGNSALQDLIPSEHFPKLRVMEMPYAYQCCAFA
VCDNLKHSGQMNKDENSSADDFYRKDIGLLHLQDDRDFEDFLLDFEEDVKVLHSVQCTPS
AGPFKPCDHLFGSWLTRTGVWLIVLLSFVCNALVIATVFRPLSYVPSIKLLIGLIAIMNT
LMGLSSGVLATVDALTFGNFAQYGAWWESGVGCQITGFLSVFAAETSIFLLTVAALERGF
SIKCTTKFETKSSFINVKLSIVFCFLLSIVIAVSPLLSGSTYGTSPLCFPLLFGDPSSMG
FMVALVLLNSLCFLVMTIAYTKLYCSLEKGELENIWDCSMVKHIALLLFTNCILYCPVAF
LSFSSLLNLTFISPEVNKSILLLIIPLPACLNPLLYILFNPHFKEDIGSLKNGDILWSRS
RQTSLASVSSEDAEKQSCDSTQALVTFANSSISYDLPATSSSSSYQMTNNYKLSAVAFVP
CH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggacacctccaagaccagcttcttcttgttctcggtgctgtgcagcttgcaattggtc
ggcgctgctcggcctggcaaacagcagagaagctgcccgactccatgtgagtgcgaacag
gaggggatgttggtgcgagtggactgctcggatcgggcactgactagcctgcccaggaac
ctcagcatcttcacgtcttaccttgatctaagtatgaacaacattaccaatctgccttcc
aatgtaatgcacaacctgcacttcttagaggagctacgtcttgcaggaaatgacttgaca
tacatccccaagggagcttttgctgggctcggcagcctaaaagttttaatgctacagaac
aacctgttaaggcaggtaccgagtgaagctcttcacaacctgcgcagccttcagtctctg
cgcttggatgcaaaccatatcagctatgttccaccaagctctttcaatggtttattttcc
ctccgtcacctctggcttgatgacaattctttgactgagattcccgtgagagcacttgaa
agcttgtctgcattacaggctatgaccttggcactaaacaagattcatcatataccagat
tatgccttcagaaacctttcaagtctggtagttctccatctccataacaatagaatctac
tccctgggaaagaaatgctttgacgggctccacagtctggagactttggacttgaactac
aataatttagatgaatttcctgctgccataaaaaccctaaagaaccttaaagaattggga
tttcatagtaacaacatcaaatcgatccctgagcaagcattcattggcaacccttctcta
atcacaattcacttttatgacaaccctattcaacatgtgggaagatcagcctttcaacat
ttgcctgagcttagaactttgattcttaatggggcttcacaaatcacagaatttcctgat
ctaactggaactacaagcctggagagtttgactcttacaggagcgcagcttgtgtacctt
cccagcgctgtctgcactcagctgcccaacctccaagtgctggacttgtcatataatcac
atcaaggatttgccaagcttctccggttgtcagcgactgcagaaaatagatctgcgtcat
aacgaagtctatgaaattagatccaccacctttcagcagctggttggccttcgttctcta
gacttggcatggaacaagattgctgtcatccatcctaactctttttcttctttgccttcc
ttaatcaaattggatctgtcatccaatcatttgacctcattccctgtgaccggccttcat
ggtttaactcatctaaagctaacaggaaactcagcccttcaggatctgatcccatctgaa
catttcccaaagctcagggtcatggagatgccctatgcctaccagtgttgtgcctttgcg
gtttgtgacaatcttaagcattcaggccagatgaacaaagatgaaaacagtagtgctgat
gatttctatcgcaaagacatagggctgctgcaccttcaagatgacagagactttgaagat
tttttgcttgattttgaagaagatgtaaaagtgctgcattcagtacagtgtacaccatca
gcaggacctttcaagccttgtgatcacctttttggaagttggctgaccagaactggagtg
tggcttatagtcctcctatcttttgtttgtaatgctttggtgattgcaacagtcttccga
cctctgtcatatgtcccttccataaagcttctcattggcctaatagccattatgaataca
ctgatgggcttgtccagtggtgtgctagcgactgttgatgccttaacctttggcaacttt
gctcagtatggtgcctggtgggaaagtggtgtaggttgccagataactgggtttctgtca
gtttttgcagcggagacctcaatctttctccttactgttgctgcattagagcgggggttc
tccattaaatgtactacaaaatttgaaacaaagtcttcatttataaatgtcaaactttcc
attgtcttttgcttccttctatccattgttattgcagtttcacctttgctgagtggtagt
acctatgggacttctccgttgtgctttcccctgctttttggggatccctcctctatgggc
tttatggtagctttggttcttctaaactcattatgctttcttgtaatgactattgcctat
acaaaactctactgctctctagaaaaaggcgaattggaaaatatatgggactgctcaatg
gtgaaacatattgccttgctgctcttcacaaactgcatcctatactgccctgtagccttt
ctgtctttttcctcactgttaaatctaacattcatcagccctgaagtgaataagtcaata
ctcttgttgatcattccactccctgcatgtttaaaccctctgctatacatcctttttaat
ccacatttcaaagaagatatcggaagtctgaaaaacggagatatcctgtggagtagatct
agacaaacgagtttggcctcagtcagttctgaagatgctgaaaagcagtcctgtgattct
acacaagcccttgtaacctttgcaaactccagcatatcatatgatttgccagcaaccagc
tcctcatcatcctatcagatgactaacaactataaactttcagcagtggcatttgttcct
tgtcactaa
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