Xenopus tropicalis (tropical clawed frog): 100486450
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Entry
100486450 CDS
T01011
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100486450 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100486450 (usp42)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100486450 (usp42)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100486450 (usp42)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100486450 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100486450
NCBI-ProteinID:
XP_002932001
Xenbase:
XB-GENE-920936
UniProt:
A0A8J0QLD9
LinkDB
All DBs
Position
9:complement(25292132..25313495)
Genome browser
AA seq
1015 aa
AA seq
DB search
MMCVMQTHISMALSNSGGVIKPSAVVNDLRRISKNFRYGSQEDAHEFLRYTVDEMQKSCL
RGSCRLDRHTQATTLIHQVFGGYLRSRVTCLSCKAVSDTYDQYLDLTLEIKMAHSVNQAL
EQFVRPEQLDGDNAYKCSKCKQMVTASKRFTIHRTSNVLTLSLKRFASFNGGKLSKEIKY
PEYLDLRPYTSDPNGEPVIYVLYAVLIHTGFSCHGGHYYCYVKACNDQWYLMNDSTVSTT
DIRTVLNQQAYLLFYVRSQNSQSGANLYSLHAASPSSPQPSSSQRAGSTKSTLVGPPRKI
KSSKHMNGKKSPKNQMNNSVVNTNTVNLKRPPLGNTVVNRQTVINIPNNKKQKITISINK
YQGLPLPTVHKTESLNKPTPSSTITKHSNKPTSNTSMALVRKHSPSKLYPGPVVNGSCKA
GSSLLVPYGADSSENSEEEYKGLDSSDWNGKSVNGEMSKNGLSLHKDKSSPCNSFKTSSE
KEEPPIAAVDSLSRNIIACSDTKNVNVLEITHSHNAGNPTEFSSLKKTEELTQDVDTILP
LSKEKKPLMICNNTSEDKSVEKSTLYLSNGTSSLHNTVPWRNGMDQPVKHLADKPKAEEV
QSTSEDPPASGQQESHTTDTHISKNANTLSEDPSTFNNTLANSSEEGDDKETFDKPIINK
YGNGVPSLLTCSNTSQSIVKVVAKLDTSNGNVNKISVQPLKNTDPEKKELIENGVEKSHS
VFGDAKKVKRDHLRNGRCRSDSSEGVQEKHTASNRERQSHSRERTKSDRYRPSHYHEYRH
RDHYRRNSPYKDCTKHSHTRGRSRSRDRYEKNWYSSSKRARSRSRERNYQDKGRRYDGYR
HYSDYRTSHGYRDFQDRRSSYEDKDYHSKSYNSNRSRWSYYPRDKEHEYFSSPKHNNYYS
SSLTKHSDKYYEKYNDAVDYYPADKHARIRKSKHRHSGDSDLETESRHKLNGEQRHVRKH
RWSSSSESSDCEVDTKRKKIGTNGAVTKDSSRVYGNAVITSSEKRPLKMTVFHDS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgtaatgcagacacatatatcaatggctctgtcaaactctggaggtgtcatc
aagccatccgcagttgtcaatgatctcagacgcatctctaaaaactttcgttacgggagc
caagaagacgcccatgaatttctacgttatacagttgatgaaatgcaaaaatcctgcctg
agaggttcctgcaggttagatcgacacacacaagccactacccttattcatcaagtgttt
ggcggatacctgcggtctcgagtcacgtgtctcagttgtaaagctgtgtctgacacctac
gatcaatatcttgatctcacattagagataaagatggctcatagtgttaaccaagcccta
gagcaatttgtaaggccggaacagctggatggagacaatgcctataaatgtagcaaatgc
aagcaaatggtgactgctagcaagagatttacaattcacagaacgtccaatgtgctgact
ctgtccctgaaaaggtttgcaagttttaacggtggcaaactatctaaggagataaaatat
ccagagtatcttgatcttcgtccatacacatctgacccaaatggagaaccagttatttat
gttctgtatgccgtcctcattcatactggttttagctgccacggtgggcactattactgc
tatgtaaaggcatgcaatgaccagtggtacctcatgaatgattccactgtttccaccaca
gacatcagaacagtgcttaaccaacaggcttaccttctgttctacgtcagatctcagaac
tcccagagtggagctaatttgtactccctacatgcagctagtcctagctccccacaacca
agcagcagccagagagcaggcagcaccaaatctacattggttggacctccccgcaagata
aagagttcaaaacacatgaatggcaagaaatcgccgaaaaaccagatgaacaattctgta
gtgaatactaacaccgtgaatcttaagaggccacctcttggcaacactgtggtgaatcgg
cagactgtaatcaatatacccaacaacaagaaacagaagattacaatcagcatcaataaa
taccaaggactacccctacccactgtacataagaccgagagcttaaacaagcccacccca
tcatccaccattactaagcactctaataagcctacctcaaatacctccatggcgctagta
aggaaacactcaccaagcaaactgtatccaggaccagtagtgaatggctcttgcaaggct
ggctctagtttgctggtaccttatggtgcagattcttcagaaaactcggaggaggagtat
aagggattggacagcagcgactggaatggaaagtctgtaaatggggagatgtctaaaaat
ggactgagcttacataaggacaagtcttctccttgtaactcatttaaaacgagttctgaa
aaggaagagccgcctattgctgcagttgattcgctttctaggaatattattgcctgctct
gacactaaaaatgtcaatgttcttgagatcactcattctcataatgcgggaaatccaaca
gaattcagttctctaaaaaaaacagaagaattaactcaagatgttgacactattttacct
ctaagcaaggagaaaaaacccttaatgatatgcaacaatacatctgaagataaatctgta
gaaaaaagtacactatatttatctaatggaacaagtagtttgcataacactgttccatgg
aggaatgggatggaccagcctgttaaacatcttgctgataagcccaaagccgaggaagtc
caaagtactagtgaggatccgccagcttctgggcagcaggagagccacacaacagacact
cacattagtaaaaatgcaaacactttatcagaagaccccagcacgtttaacaacacactt
gcgaactcatcagaagaaggcgatgacaaggaaacatttgacaagcctataataaataaa
tatggcaatggtgtaccctccttacttacatgttccaatacaagtcagtccattgtcaag
gttgtggctaaacttgatacttcaaatggaaatgtgaataaaatttcagtacagcctctc
aaaaacactgaccctgaaaagaaagaactgatagaaaatggtgtagaaaagagccactct
gtgtttggcgatgccaagaaagtgaaaagggaccacctccgcaatggacgatgccgctct
gatagcagtgaaggagttcaagagaaacacacagccagtaacagagagagacagtcacac
agcagagagagaactaaatctgaccgctatagaccgtctcattatcatgaatacaggcac
agggaccactatagaaggaatagcccatacaaggactgtaccaaacacagccatacccgg
ggcagatcgagaagcagggatagatatgaaaagaactggtatagcagttcaaaaagggct
cgttcacgcagcagagaaagaaactaccaggataaaggcaggcgatacgatggctacaga
cactatagtgactatcgtacatctcacggttatcgggattttcaagatagaaggtcttca
tatgaggataaagactatcacagtaaatcctataactctaacagaagcaggtggtcttat
taccccagagataaagaacatgaatatttcagcagccctaaacacaataactattattca
tcatctcttacaaagcactctgataagtattatgaaaaatacaacgatgctgtggattac
tacccagctgataaacatgctaggataaggaaaagcaaacacagacactcaggagacagc
gaccttgagacagaaagcaggcataagctgaatggcgaacagcggcacgtgaggaaacat
agatggagcagctcctctgaaagcagtgactgtgaagtagacaccaaacgaaaaaagatt
ggaaccaatggagcagtgactaaagacagctccagggtatatggaaatgcagtcatcact
tcttccgaaaagagacccctgaaaatgacagtttttcatgactcctaa
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