Xenopus tropicalis (tropical clawed frog): 100486472
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Entry
100486472 CDS
T01011
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100486472 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100486472 (llgl1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100486472 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Lgl_C
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
100486472
NCBI-ProteinID:
XP_002935892
Xenbase:
XB-GENE-868457
UniProt:
A0A7D9NM47
LinkDB
All DBs
Position
9:complement(15995124..16028225)
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AA seq
1052 aa
AA seq
DB search
MMKFRFRRQGHDPQREKIKQELFAFNKTVEHGFPNQPSSLAFDPLLRIMAIGAKSGAVKI
YGAPGVEFTGLHKDTATVTQMHFLPGQGRLLSLLDDNTMHLWELQQKDGSSHLEETRSFL
LPGKPGFDCANSPPSFTRVTVILITASCEVAGLGTEGGGVYFIQIPSLKLLEEKTLLQDE
IVKSLPEEYRCGKTLGPVESLQEHPCQRGTILIGYSRGLVVLWDQEGRKVEHLFLGNQQL
ESVFWGRKGTSFISSHSDGGYMVWEAASDSSTTSQPVTSKIPYGPFPCKAINKIQWRSSS
SGNPYIIFSGGMPRASYGDRHCVTILQGQNLVTLDFTSRVVDFFTVCPLKSEDDSDNPTA
LVVLVEEELVVIDLQTPGWPTVPTPYLAPLHSSAITCAYHISNVTTKLWERIISAGEQQN
PQFSSVNWPIDGGRNLAEEPAQRGLLLTGHEDGTVRFWDASGVALRPLYKLSTAGIFQTD
CDHNESFNQSNDEEWPPFRKVGCFDPYSDDPRLGIQKIALCKYSGKMLVAGTAGQVLVMD
LNDEKVEHTINVATVDLLQEREGFTWKGHDRLTPRNGSLFFQPGFQTITLVQCMPPAAVT
AVALHSEWNLVAFGTSHGFGLFDYHRRSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQ
SFRRIRKSRVSGKKRPNTGSPPSRLQEANAQLAEQAGPHDLDIAPVQRRIEPRSADDSLS
GVVRCLYFADTFLRDAIHHGPTMWAGTNSGSVFAYALEVPSREKLSDRSAEAVLGKEIQL
MHRAPVVSIAVLDGRGNPLPEPFEVSQDLAKAPDMQGTHSVLISSEEQFKVFTLPKVSAK
TKFKLTAHEGCRVRKVALATFTSATSDDYSENCLACLTNLGDIHVFTVPGLRPQVRYDCI
RKEDISGIASCVFTKYGQGFYLISPSEFERFSLSAKNITEPVCLVEFDRPHDPLHFSNKM
TPSPKGNQANGTHILRDSEASQQATEGNGCERMAEFSPSPLDSPMNSMDTTLDTTGDITV
EDVRDILGSTEEAEKNMKNSADDPLPSEILIK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggttcaggcggcagggccatgacccgcagagggagaagataaagcag
gaactgtttgccttcaacaagaccgtagaacatggattccccaaccagccgagctcactc
gctttcgaccccttactccgaattatggcgattggagcaaaatcgggagctgttaaaata
tatggcgccccaggcgtggagtttacaggtttgcacaaagacacagccaccgtgacccag
atgcacttcttacccggacagggtcgcctcctttctctgctggacgataacaccatgcac
ctatgggagctgcagcagaaagatggcagctcccacctcgaggagacccgcagcttcctc
cttcctggcaagccagggttcgactgtgctaactctcccccgagttttacacgagtgact
gtcatactgataactgcctcgtgcgaggtggccggcctcgggacagaaggaggaggggtg
tactttatccagatccccagtttaaaattgctggaggagaagactttgcttcaggatgaa
atcgttaaaagcctgccggaggagtacaggtgcgggaaaactctaggacctgtcgagtct
ttgcaagagcatccgtgccaacgcgggacgatcctgattggctacagccgggggctggtg
gttttgtgggaccaggagggtcggaaagtggagcatctgtttcttgggaaccagcagttg
gagagtgtcttctgggggcgcaaggggacttcattcatcagctcccacagcgacggaggg
tatatggtatgggaagcggctagtgattccagcaccacgtcgcagccagtcacctctaaa
ataccatatggtccatttccctgcaaagccatcaacaagattcagtggaggtccagcagt
tctgggaacccatacatcatattcagtggaggaatgccccgggccagctacggagaccgt
cactgcgttactatccttcaagggcagaacctggttaccctggatttcacttctcgcgtt
gttgacttctttacagtgtgccctctcaagagtgaagatgactcagacaatcccactgct
ctggtagtgctggtggaggaggagctggtggtgattgatctgcagacccctggctggccg
accgttcccaccccttacttggcccccctccattcctccgccatcacctgcgcctatcac
atctccaatgtcaccaccaagctgtgggagaggatcatcagcgcgggggaacagcagaac
ccccagttctcctctgtgaactggccaatagatggaggaaggaatttagcggaggaacct
gcacagagagggctgcttcttacagggcatgaagacggcacggtgcgcttctgggacgcc
tccggcgtggcgctgagaccgctgtacaaattaagcacggctgggatctttcagacagat
tgcgaccacaacgagagtttcaaccaaagcaacgacgaagagtggccccccttccgcaag
gtcggctgtttcgacccttacagcgatgacccgcgcctgggcatacagaagattgccctt
tgcaagtacagcggcaagatgctggtggctggcactgccgggcaggttctggtcatggat
ctgaacgacgagaaggtggagcacaccatcaacgtggccacagtggatctgttacaggaa
agggagggatttacgtggaagggccacgataggctgaccccaaggaatggctccctcttc
ttccagcctggtttccagaccatcacgttggtgcagtgcatgcccccggccgctgtcact
gccgtcgcgctgcattcagagtggaacctggtggcgtttggcactagccacggctttggg
ctctttgattatcaccggaggagccctgtgcttgcccggtgcactctgcaccccaatgac
tcgctcgctatggagggtcccttatccagggtgaagtccctgaagaagtccctacggcag
tcgttccgcaggatacggaagagcagggtctctgggaagaaaaggccaaacacaggcagc
ccccccagcaggctacaggaggccaacgctcagctggcggaacaagctgggccacatgac
cttgacattgcccccgtgcagagaaggattgagccccgctcggccgatgattccctgtcg
ggtgtcgtgcgttgcttgtattttgcagacactttcctacgggacgcgatccatcacggc
cccaccatgtgggcaggcaccaattccggctctgtatttgcgtacgctttagaggtgcct
tcgagggagaagttatcggaccgctcggcagaggctgtgttgggcaaggagatccagctc
atgcatcgggccccggtagtgtccatcgcagtgctggacgggcggggaaaccccctgcct
gagccctttgaggtttcccaggatttggccaaagccccggacatgcaagggacccactcg
gtgctcatctcttccgaggaacagtttaaggtattcacgttgcccaaggtcagtgccaag
acaaagtttaagctgactgcccacgagggctgccgcgtgaggaaagtcgccctcgccacc
ttcaccagtgccacttccgacgactactccgagaactgtttggcgtgcttgaccaatctg
ggggacatccacgtgttcactgtgccggggctgcggcctcaagtgcgctacgactgcata
cggaaggaggacatcagtggcatcgcctcctgcgtattcaccaagtacgggcaaggcttt
tacctgatctccccctcggagtttgaacgcttttctctgagtgccaagaacatcacagaa
cccgtgtgtctggtggagtttgatcggccccacgatccattacacttcagcaataagatg
actccatctccgaagggcaaccaggccaatgggacgcacatactgagggactctgaagcg
agccagcaggcaacagaagggaacgggtgtgagcgtatggcagaattctcgccctctcct
ctcgactcgccgatgaacagcatggataccactctggacaccacgggagacataacggtg
gaggacgtgagggatatactgggatcaacagaggaagctgaaaagaacatgaagaattcc
gcagacgaccccctgccctctgagatactgattaaataa
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integrated database retrieval system
