Xenopus tropicalis (tropical clawed frog): 100486474
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Entry
100486474 CDS
T01011
Name
(RefSeq) meckelin
KO
K19348
meckelin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100486474
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
MKS complex
100486474
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Paralog
GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
100486474
NCBI-ProteinID:
XP_012817756
UniProt:
F6RH46
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All DBs
Position
4:complement(65268960..65296775)
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AA seq
915 aa
AA seq
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MPVGICPLFVLFLFPALARPQSTSIAFTQPANCAADQFYNTAALSCFPCGSSLGVVASPD
GLRCTCSKEYAISDLGSPLVNCTPCSIGQVVSFDQRECLSCTGSTCTCGAQQIRAENLSS
KTYSCADCGALSVPNGIGNQCILCQQTFISSNCTCPESNQSGGLCFPQAATVYAVASAWE
TLYLDSSYQACSIYSNITACQVLTNLVILNVTSLTSTALNLYSLIYLSQNKFLPPLFYST
SVAQLWNTAPSPAQLSFTRNAQMQFKLLKYDLRGNFLGWQNLKGGTLQMCPNTQAVWDAA
FRFGTYYNQSCTLQVADLLQNVPEPVFYELFVSYTSNGVSMVWPVPVWNAGFQGSTNPIS
SSSTNALRRFFLVDGISGRTGNISNPPTYITVATSLNLSVYVTTGDTWDQSPFQLTVRYQ
KIPGLSGTAQVSFAVTYSQSQGTYKRDTDIALGVLGSLASLYAILETSSWLRRSGQQYIG
ILVIIKFLAFLSGALANTFFLITLGTAIYWLIAFKGQTSAVHVTLPPAGGQIETDFIIYL
SVAFALKTIELLHLLVSQLTVSMFLIDWEKPKEKITSNSQVKSNISIWRTILVANEWNEM
QTYRKISPIFQLFSVLLLLEVVGLKNITAKDLNLDLNPPSGTYLASWSIILRFGIAASMW
LAVGIVQVLFCIVIYERFFEDKMRQFTDLCSLSNVSVFILTHRCYGYYIHGRSVHGQADV
SMETMLSNLKKEEENLCPLRGLEPSSDIQTFEVLLSDRVRDQYEKIMEPLLEAPRGQRGV
NESNPLMQQRIKTYYTINRFLSSFLDHVYKELDYVVKDKLFLEHIFDMEFQQPMEKSILY
TDDGARFSRTLFYGNELVLLLFDTLLFCIIDLGTQNFVLATIITYVVQTLVVILRYQIGK
KNVSRQTMVEENFLI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttggaatatgtccgctgtttgttttattcttattcccggcactggctcggcca
cagagtacttccatagcatttacacagccagctaactgtgcagcggatcagttttataac
acggccgccctgtcgtgtttcccttgcggatcatcattgggggtagtggccagtcctgac
ggtctccgatgcacctgttctaaagaatatgcgatcagtgatcttggatcccctttggta
aactgcacaccctgcagcataggccaggtggtatcttttgaccaaagagaatgcctgtca
tgtactggcagcacctgcacatgtggagcccaacagatcagagcggaaaacctttccagc
aagacctactcgtgtgcagattgtggtgctttatcagtaccaaatggcatcgggaaccag
tgcattctatgtcagcaaacctttataagcagtaactgtacttgtcctgaaagtaaccag
tctggaggcctctgtttcccacaagcagcaacggtgtatgctgtggcatcagcttgggag
actttgtacttagattctagctaccaggcgtgtagcatttacagcaatatcactgcttgc
caggttctcaccaacttggtcatcctaaatgtgacgtccctcacgagcaccgcactgaat
ttatacagtctcatatatctttcacaaaataaattcctcccaccgttattctatagcact
agtgtagctcaactatggaacacagcaccatcacctgctcagttgtccttcacaagaaat
gctcagatgcagttcaagctcctgaagtatgatctccgtggaaactttttgggctggcaa
aatctgaaaggaggaactttacagatgtgcccaaatacacaggctgtttgggatgctgca
tttagatttgggacatattacaatcagtcttgcaccctacaggtggctgaccttcttcag
aatgtaccagaaccagttttttatgagcttttcgtttcttataccagtaatggtgtcagt
atggtatggcctgttcctgtgtggaatgctggcttccaaggcagtacaaatccaatttcc
agcagcagtaccaatgctctgagacgattctttctggttgatggcatttcaggaaggact
ggaaacatttccaaccctcctacctacattactgtagcgacaagtctcaatttaagtgta
tatgtgactactggggacacatgggatcagtctcccttccagctgactgtccgttatcag
aagatacctggtctaagtggaacagcacaagtctcatttgctgttacctacagtcagagc
caaggtacctataagagagacactgatattgcgttgggagtccttgggtctcttgctagc
ctatatgccatcctagagaccagcagttggctgcgaagatcagggcaacagtacattggt
attctggtaatcataaagtttctggctttcttgtctggagctctagcaaatacattcttc
cttatcacccttggaactgcaatatattggcttatagcgtttaagggacaaacatcagca
gttcatgtcaccttaccgcctgctggcgggcaaatcgagactgattttatcatatactta
tcagtcgcttttgctctgaagaccatagagctgcttcatcttctagtctcccagctgact
gtctccatgttcttaattgactgggaaaaaccaaaggagaaaataacatccaattcccaa
gttaaatctaacataagcatttggaggactattcttgtggctaatgagtggaatgagatg
cagacctacaggaaaattagtcccatattccagctcttctctgtattgctgcttctggag
gtggtggggctcaagaacatcactgccaaagatttaaatcttgacctgaaccctccaagt
ggcacctacctggcatcctggagcatcattctgagatttggcattgctgcttccatgtgg
ttggcagtgggcattgttcaggttctgttttgtattgtcatctatgaacgattttttgaa
gacaaaatgcgccagtttacagatctttgttcgctgagcaatgtttcggtttttatactg
actcacaggtgctatgggtactacatccatgggcgctctgtccatggccaggctgatgta
agcatggagaccatgctgtcaaatttgaaaaaagaagaggagaacttgtgtcctttgaga
ggtttggaacccagttctgatatccagacctttgaggttttgttgagtgatcgagtgagg
gatcagtatgagaagatcatggaaccacttcttgaggcacccagagggcagagaggagta
aatgaaagcaaccccttaatgcagcaaaggataaagacttattacactattaaccgcttc
ctttcctctttcctggatcatgtttacaaagagctagactatgtggtgaaggacaagcta
tttctggaacacatctttgatatggagttccagcagcctatggagaagtctattctttac
actgatgatggcgctcgttttagccggacactgttctatggcaatgaattggtgttgctt
ctgtttgacaccctgctcttttgcatcattgatttggggacacagaattttgtgctggca
acaatcataacatatgtagttcagacgctggtagtaatattacgttatcagattggaaag
aaaaatgtgtccaggcagacaatggtggaggagaatttcctcatttga
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