Xenopus tropicalis (tropical clawed frog): 100486498
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Entry
100486498 CDS
T01011
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03266
Virion - Herpesvirus
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100486498
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100486498
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100486498
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100486498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100486498
04090 CD molecules [BR:
xtr04090
]
100486498
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
100486498
CD molecules [BR:
xtr04090
]
Proteins
100486498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
C2-set_2
Ig_2
V-set
Ig_4
Ig_C17orf99
Ig_5
Motif
Other DBs
NCBI-GeneID:
100486498
NCBI-ProteinID:
XP_031753326
UniProt:
A0A8J1J9I1
LinkDB
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Position
2:complement(7591996..7610412)
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AA seq
418 aa
AA seq
DB search
ASDEGISSLKFPCAFGSLPAIRTCCRTMSVPLFLWGRSVSLILLLFVPGSPQVSVIVDRE
VNAKLGSDAKLYCEVKTPDIISQVTWQRKLSPNNENFLTNSKGEEPMHLTPFGQRVRFLG
NGDLGGSILIPNVTLADQGTYLCIFTTFPGGTKEGRIHLFIWVEPSVEVQLNPVLSGPNP
DIIAECVAFASKPAANISWDTYGLPHSSTETPVQHSNGTVSVRSQLWMVPSPGLNGHQAT
CLVSLPEQMYEKLIHMNITNIQYAPQAVHIKVIQRDTLYIECWADGNPPVTYTWRRGNRS
ITDDEAQVTGNTLYFPRGNTDNNGLYVCEATNSIGRNSKSVYLYKYSDAVPRGSYGAYIA
AIVIQSLMILRMVVYFIKRKRREGMFNCRCIEGQNPPEARDESRHLDADQSDIKCMSH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gcaagtgatgagggaattagttccctgaagtttccctgtgcatttggctccctgccggct
atacggacatgctgccggactatgtcggtaccgctatttctgtggggccggagtgtgagc
ctcatcctcctgctgtttgtaccggggagcccgcaagtctcggtgatcgtcgatagagag
gtaaatgccaagttggggtcggacgccaagttatactgcgaagtgaaaacccccgacatt
atctcccaagtcacttggcagaggaagttgtctcccaacaatgagaatttcctgaccaac
agcaaaggggaggaacccatgcacctgactccgtttgggcagagagtgagatttctgggc
aatggggatctgggaggctccatactgattcccaatgtaaccctggccgaccagggcacc
tacctctgtatcttcaccacatttcccggaggcacaaaggaagggaggatccatttattc
atctgggtggagccgtcggtggaagtgcagctaaatccagtgctgtcggggccaaatccg
gatattattgccgaatgtgtagcctttgcctccaaacccgcagccaatatcagctgggat
acatacggcctcccccactcatccactgaaaccccagtacagcattctaatgggacggtg
tcggtacggagccagctatggatggtgccttctcctgggcttaatgggcatcaggcaact
tgtctggtttctctgcctgagcaaatgtatgagaaactgatacatatgaacattacaaat
attcagtatgcaccccaggccgtacatatcaaagtaatacagagagacactctgtatatt
gaatgttgggcagatggcaaccctccggtcacttatacatggaggagggggaatagatcc
attactgatgatgaggcccaggttacagggaacactctgtattttcccagagggaataca
gataataatggcctgtacgtctgtgaggccacaaacagcattgggagaaactcaaagtca
gtctatttatataaatactcagatgctgttccccgagggagctacggcgcgtatattgca
gccattgttatccaaagcttaatgattcttagaatggttgtgtactttataaagagaaaa
cggagggaaggaatgtttaattgtaggtgtatagaagggcagaaccctcctgaggcacgg
gatgaatcaaggcatttagatgctgatcagtcagacataaagtgcatgtctcactga
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