Xenopus tropicalis (tropical clawed frog): 100486510
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Entry
100486510 CDS
T01011
Symbol
rab39b
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100486510 (rab39b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100486510 (rab39b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xtr04031
]
100486510 (rab39b)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
100486510 (rab39b)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
100486510 (rab39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
LigB
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
100486510
NCBI-ProteinID:
XP_002931827
Xenbase:
XB-GENE-493570
UniProt:
A0A6I8PZR9
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All DBs
Position
8:complement(50644901..50656770)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKAHVQPYQIVFVL
VGHKCDLDTQRQVTRHEAEKLASSFGMRYIETSARDAINVEKAFTELTRDIYELVRKGEI
NIQEGWEGVKSGFVPNVVHSSEEVIKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaatttggctataccagtttcgtctcattgtcattggagactcaactgtgggt
aaatcgtgcctcattcgaaggttcacagaaggccgcttcgctcaagtctctgacccaact
gtaggagtggatttcttctcaaggctggtcgagattgaaccaggcaagcggatcaagcta
cagatctgggatacagctggtcaggagagattcaggtctatcacacgtgcctactacaga
aactctgttggagggctcctgctgtttgatatcaccaatcgccgctccttccaaaacgtc
catgagtggttagaggaagccaaggcacatgtgcagccttaccagatagtctttgtgtta
gttggtcacaagtgtgaccttgacacgcaacgccaagtgacaagacacgaggccgagaaa
ctggcatcttctttcggcatgagatacattgaaacctcagcacgtgatgccatcaatgta
gaaaaagctttcactgagctgactcgtgatatatatgagctggttaggaagggagagata
aatattcaagaaggttgggaaggagtaaaaagtgggtttgtcccaaatgtagtgcattct
tcagaggaggtaattaaatcagacaggcggtgcctatgctaa
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integrated database retrieval system
