Xenopus tropicalis (tropical clawed frog): 100486517
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Entry
100486517 CDS
T01011
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100486517 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100486517 (arid2)
03021 Transcription machinery [BR:
xtr03021
]
100486517 (arid2)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100486517 (arid2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
ARID
100486517 (arid2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100486517 (arid2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100486517 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
100486517
NCBI-ProteinID:
XP_002932851
Xenbase:
XB-GENE-6070950
UniProt:
A0A8J0QLB7
LinkDB
All DBs
Position
3:complement(63873024..63925888)
Genome browser
AA seq
1815 aa
AA seq
DB search
MSNSTGKPEPDHRRKGQAFLDELRQFHESRGSGFKKIPAVGGRELDLHALYTRVTTLGGF
AKVSEKNQWGEIGEDFSFPRGCANAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKQ
QLPIGAIPCSYNYQQHSIPDYLRQSYGLTMDFNTPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGNEWKEKTDRDFVQFWKDI
VEDNEVRDLIYDKSTSQGSSPESLWEALFHPPRKLGINDIEGQRVLQIAVILRNLSFEES
NVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELQLDPVDFKTTHLMFHTITK
CLMSRDRFLKMRGMEILGNLCKAEDNAVLICEYVDQDSYKEIICHLSLPDVLLVISTLEV
LYMLTELGEVACVKIANVERSIDTLVCLISMDIQMFGPDALTAVKLIEHQSSNNQVVSEI
RPQTVEHVPSPVNAGNVPATRPVPAHAAPPPGIVEIDSEKFGCQWLNAHFEVCPDSSVSR
SEMYSEYLSTCSKLARGGILTSSGFYKCLRSVFANHNIKRVEDPNNNGQAHIHVAGVRRR
AIPLPVQMYYQQHQPASVVRVDVVSDVAGKNPSGMQQGVANHFQRVQASNQVPTLNTTQI
SLPIQGVHTVTQNPLSQVQHQQNPTVTLIQNKTPISCEVKATVIQGSVPHSSVPVSIALG
SSTQASIVQNHSGIGQQSSVTVVGSQALFHHPSVLQPQSALHAVVPGQITSGTPVAVIQQ
TVPQGHIFGRVQNISQGSSALSQAQQLVPTSSQTVQVTSQQSPASNQQKDTVIITPQQYV
TTTSSNIVTATTVQNFQVAPGHVVTIAGVQNPQASRIGFQNIAPKPLCSQQVSSTVVPQT
LQQQQQQQSVVIVSQPAQHGQAYAPAIHQIVLANTAAIQTGQTVQLPGQPSISPSSSSPM
PTTNNQLPPLMTSPPTTPVSQGPPPTVSQMLSVKRQQSPAPPVTTPQQQAQVPQQTQTQT
QQQPPQQVQVQVQQQQQTTSGVGLPTPGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPP
NNARAPSPQLVYQVANNQAPSFGVQGQPTPQQILVGQQNVQLVQSAMPNQTAVQTVPISN
LQILPGQLISNSPATIFQGTTGNQVTITVVPNTSFATATVSQGTAPQIIAPMSGTQTGVG
LQVQTIPATLTQSAGHLSGSAASPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSC
PKASANTSNGETNENEVQIGNIMNGKKYDSSLPPSNSGKTQKETSSNSLVTNGSSVELGE
NGISGKQNSELTDMQETKIDLKKPQVNGICDFDKADGSHLSKNIPNHKASNHVGNGDISP
VEQQELLDSSQLVTAKGDQVEKLSNGPVLTNRAQDASNLAIQIRCNSTDLPNGPIVSSLN
SDVPQQRPSVLVSTQSTASVLPGHQVIAFPHTGQRVSQPVLSADVRPTNGTTDCKTVKRP
AEDNDRESVPVIPNKVGVRIVTISDPNNAGCSATMVAVPAGVDPSTVAKVAIESAVHQKQ
QHPHTFVQTMVAQSTPVTTLPALQVQGHLVSSQPSPFPVTTSVHHVEQVKKPGQNFMCLW
QSCKKWFETPSQVFYHAATEHGGKDVYPGQCMWEGCEPFQRQRFSFITHLQDKHCSRDAL
LAGLKQEEQGHQKPSNKQPSAGASSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEK
EGPITKHIRLTAALILKNIAKHSERGRRSLKRHENQLSFLALSNMEASSTLAKCLYELNI
TSHSKDQETDFEMLQ
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactctacgggaaaaccggagcccgatcaccggaggaaggggcaggctttcctg
gatgagctgcggcagttccatgagagcagagggtctggcttcaagaagattccagctgtt
ggaggcagagaactggaccttcatgctctttacactagagtcactactttgggagggttt
gccaaggtatctgaaaagaatcagtggggtgaaataggagaggactttagctttccaaga
ggttgcgccaatgctgcctttgctttgaaacagtattatctgcgttatttagagaaatat
gaaaaggtgcatcattttggagaagatgatgatgaagttcagcctggaaatccaaaacaa
caactcccaattggtgcaataccgtgttcatacaattaccagcagcatagtataccagat
tatttacggcagagttatggccttactatggactttaatacaccaaacgattacaataaa
ttggtgctctcgcttttatctggactcccaaatgaagtggactttgcaatcaacgtgtgt
acgcttctgtccaatgaaagcaagcatgtaatgcagcttgagaaggaccctaaaattatc
accttattgcttgctaatgctggggtgttcgatgacactctaggatctttttcagctgta
tttggcaatgaatggaaggagaaaacggacagagattttgtacagttttggaaggatatt
gtagaagataatgaagtacgtgacctcatatatgataaaagtacatctcaaggttcctca
ccagaatccttgtgggaagctttatttcacccacctagaaaattgggcattaatgacatt
gaagggcagcgagttctccagatagctgttattttacgaaatctttcctttgaagaaagt
aatgttaaacttttggcagctaaccgtacatgtctgcgttttctgttactgtctgctcac
agtcactttatttcgctaagacaactggggctggacacattggggaatattgcagcagag
cttcagttagaccctgttgacttcaaaaccactcacctaatgttccatactattacaaag
tgtttaatgtcaagagatagattcctaaaaatgaggggaatggaaattttaggcaatctt
tgtaaggctgaagataacgcagtccttatttgcgaatatgtggatcaagatagttacaag
gaaataatctgtcatcttagtttaccggatgtgttgcttgtaatatctaccctagaagtg
ctgtatatgcttacggaactgggagaagtggcctgcgtgaagattgcaaatgtagaaaga
agtatagatactttggtgtgtctaatttctatggacatacagatgtttgggcccgatgca
cttacagcagttaagcttattgaacatcaaagttccaacaaccaagttgtttctgaaatc
cgccctcaaacagtggagcatgttccttctccagttaatgcaggcaatgtcccagctaca
cgtccagtaccagcgcatgcagcaccccctcctggaattgtagaaatagacagtgaaaaa
tttggctgtcaatggttaaatgcacattttgaagtttgccctgacagctcagtttcacga
tcagaaatgtattctgaatacctctcaacctgcagcaaactagctcgtggtggtatctta
acatcatctggtttttacaaatgtcttaggtctgtatttgcaaaccataatattaaaaga
gtggaggacccaaacaataatgggcaagctcacattcatgttgctggagtaagaagaagg
gccataccacttcctgttcaaatgtactatcaacagcaccagccagcatctgttgtccgg
gttgatgtggtttcggatgttgctggaaaaaatccatcaggaatgcagcagggagtagca
aaccattttcagagagttcaagcaagcaatcaagttcccactttaaacacaacacagata
tctcttcctatacaaggtgtccatactgtgacacaaaatcctttaagccaagtccagcat
caacagaatccaacagtgactcttatacaaaataaaacaccaatttcttgtgaagttaag
gccaccgtaatacaagggtctgtcccacattcatcagtccctgttagcattgctttggga
agttctacacaagcttctattgttcagaatcacagtggcataggacagcaatcctctgtt
actgtagtaggatctcaggcattgtttcaccatccatctgttcttcagccacaatctgca
ttgcatgctgtagtacctggtcagattacatcaggaactcctgttgcagttattcagcaa
actgttccacaaggtcacatatttgggagagtgcagaatatttcacaaggttcatcagct
ctttctcaagctcagcaattagtccccacatcatcccaaactgtacaggtcacttctcag
caaagtccagcttccaaccagcaaaaagataccgtcatcataacaccccagcaatatgtg
acaactacttcatccaatattgtaactgcaaccacagtgcagaatttccaggttgcccct
gggcatgttgttactatagctggggtccaaaatccacaagcttctaggattggcttccag
aacattgctccaaaacctctctgttcccagcaagtttcatcaaccgtagtaccacaaact
ctccaacagcaacaacagcagcaaagtgtagtgattgtaagtcaaccagctcagcacggt
caggcttatgcaccagctattcaccaaattgttcttgctaatacagctgcaattcagacc
ggacaaactgttcagctccctgggcaacctagtatatccccatcctcatcttcacccatg
ccaactaccaataaccagctcccacctctaatgacctctcctccaaccacgccagtgtca
caaggacctcctcctactgttagccagatgctttctgttaaacgacagcagtcaccagca
cctccagtcaccactccacagcagcaggcacaagttccacaacagacacaaacgcagacc
caacagcagccccctcagcaggtacaagtacaggtccagcaacagcagcaaacaacttct
ggggttggactgcccactccaggggaatcaagcctcataaagcaactgttgcttccaaaa
cggggaccttcaacacctggtggaaaacttatacttcctgcacctcagataccacctcca
aataacgcaagagcgcccagtcctcagctggtatatcaagtagccaataatcaagcacct
tcctttggagtgcaagggcagccaacacctcagcaaatactggttggccaacaaaatgtg
caattggtccaaagtgcaatgccgaatcaaactgcggttcaaactgttccgatctccaat
ttacagatcttgccaggacagttgatctcaaattccccagcaacaattttccaaggaact
actggcaatcaagttactataactgttgtgccaaatacaagttttgctactgcaacggta
agccagggaactgcaccacagattattgcaccgatgagtgggacacaaactggagttggg
cttcaggtacaaacgattcctgctaccctcacacaatcagcaggccatttatcagggtct
gctgcttctcccccatttaaaggtgacaaaatcatttgccaaaaggaggaggaagcaaag
gaagcaacaggactacatgtccatgaacgtaaaattgaagttatggaaaatccctcttgt
ccaaaagcttctgcaaacaccagcaatggggaaactaatgaaaatgaagtgcaaatagga
aatattatgaatgggaaaaagtatgactcaagtctacctccttcaaactcagggaaaact
caaaaggagaccagttcaaattcactggtcacaaatgggtcatctgtggaattgggggaa
aatggaatttctggaaagcagaactctgagctgactgatatgcaggagacaaaaattgat
ttaaaaaaaccacaggtcaatgggatttgtgattttgataaggcagatggatctcatttg
agcaaaaacattccaaatcacaaagcttccaatcacgtaggaaatggtgacatatctcca
gtggagcaacaagaactcttggattcttctcaactagtaacagccaaaggtgatcaagta
gaaaaactttcaaatggacctgtattaaccaatagagcccaggatgcttcaaatttagca
atccagatacgttgtaattcaacagatttacccaatggacctatagtttcaagtttgaat
tcagatgtgcctcagcaacgtccgtctgtacttgtttcaacacaatctacagcttctgtt
ttaccaggtcatcaagttatagcatttccccatacagggcaaagagtttctcagcctgtc
ctttctgccgacgttcggcctacaaatggcacaacagattgcaagactgttaaaagacct
gcagaggataatgatagggagtctgttcctgttattccaaataaagtgggagtgaggatt
gttacaatcagtgaccccaacaatgctggctgcagcgcaacaatggtcgctgtgcctgct
ggagttgatccgagcactgtagctaaagtagcaatagaaagtgctgttcaccaaaaacag
cagcatccacatacttttgtacagactatggttgcacagagcactcctgtaacaactctg
ccagcattgcaagtacaaggccaccttgtcagttctcagccgtctccatttccggtaacc
acatcagttcaccacgtggagcaagtgaagaaaccaggacagaatttcatgtgcttgtgg
caatcatgcaaaaaatggtttgaaacaccgtcacaggttttctaccatgctgcaacagaa
catggaggtaaagatgtgtatcctgggcagtgtatgtgggaaggttgtgaaccctttcag
cggcagaggttttctttcatcacccacttacaggacaagcactgctcgagagatgctcta
ctagctggactaaagcaagaggagcaaggacatcaaaaaccttccaataaacaaccttct
gcaggtgcttcgtcaacccccagagcacagaaggccattgtaaaccatcccagtgctgcc
ctcatggcgctgaggcggggatcaagaaatttggtctttagagactttacagatgaaaaa
gagggaccaatcacaaaacacatccgattaacagctgccttaatattaaaaaatattgca
aaacactcagagcgtgggcgcagatcgctaaaaagacatgaaaaccaattatcatttcta
gcccttagtaatatggaagcttcctccacacttgccaaatgcctttatgaactcaatatt
acaagtcacagtaaagatcaagaaacagactttgaaatgctacagtaa
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integrated database retrieval system
