Xenopus tropicalis (tropical clawed frog): 100486598
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Entry
100486598 CDS
T01011
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100486598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100486598
03036 Chromosome and associated proteins [BR:
xtr03036
]
100486598
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100486598
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
100486598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Trehalose_recp
Motif
Other DBs
NCBI-GeneID:
100486598
NCBI-ProteinID:
XP_031757696
UniProt:
A0A8J1JM46
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Position
5:2468383..2496055
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AA seq
1245 aa
AA seq
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MRKHRIARLRMRTAPIAALWYQMRMRNDGRVAGGALSEWHSNSTGAMASQLHVLCGRLVR
ALTVIMDPKSSQEGRQEAHKFCEEFKERSPLCVPCGLQLSNRSHSPCVRHFGLHVLEHVI
KFRWNVMSVDDRVFVKNSVMLLISHGIHPILEEKGHIKDVIARVVVEIIKREWPWNWPDM
VNELACLGNFGDAQMELVMFILLRLAEEIGPLETRPICQPKDLHELLKENMDKIFAFVVT
ILQRCVPNCQNLTQGQFRVAAAALRTLAGYIKCLPTRLIMADNCTLLWLLCVLLNVPELQ
MEAAECLLFAVNKKGLLLEERVPLLILFREDALRYILTAAQLADSDPLQERNYVILKMIG
QILCDLGNQLCAQVTAFEVKTPENFDRYLEALLSLTRHPSLFLTSLAAEVWGTLFNHRVL
SHDPQLTAAIPDVLRAAMVSIVKVGYPSMDNSPSCEYSRMDFDDDIEFNTFFLSFRKQMG
IVVRSLCRLDTRTVLHVATEWMRHQLSAPLDPGPHNATSGEALCSPHSPSFLHWEAMSFF
CSEVFAPLCRPLSAEEVLLTQGVSLLQQVISYETKDPLIVSCVLTNLSTLLPFIRHGSDL
LPLMVSKLLSAAGFADTDAVKVPRTLLMNIRSCASALLQTICIRFPDLVGPHFEVLHTRI
KALLGQEQLLADAERCALMGALVLASNHFKNYNRQRSILEELLQPAVSMLLSEEMQRVLS
GPSEFISFLRANNPGSENQEEGVDGGRLSYSKLCYCAYTFLAAIRKSRRPIIFKEAKAGG
FVKGCTPDGVAMLQNPCAGELLKVLDRLLVLIRTMNSLYLPEVMTKMAETSLKMAETSQS
CELEMGNKSIMDCSQPIMGESGPPVTMPEQLQGPYNSLYKACCQILGKCGPSMPHEFYSV
PDLASRLLSSAFTNLDYVSDLHLRHIVIDLVTPLIFYCPSKKYQSVALPILGPLLMSLYQ
RLSQKWLCINQRTTASEEDLLEEESESQDDLMVRLLSRTVVQFIYICCMASHTTYQSDAD
YRIAPRVEQAEADEEEENLILMAAAAKVLKSLALSKLGQFLLSNEEVYTALLLMAYSSLM
WKDPQTCNMAATRLCWSLLSQMMAVSLPADAAVCYFASVLGGLQANGHCKSCTDPLVRLA
FRFYVALRPKYPELHGLMEQVPNIQRDTLERFDKNLLSPDLEINERMCREQFAKLLSGCT
EKPLADQFYKVHIQHLPAGFKGTSGPVLEPDSVPISCESSLDPTH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacacagaatcgcccgactgcgcatgcgcaccgctcccatagcggctctatgg
taccaaatgcgcatgcgcaatgatgggagagttgctgggggtgctctcagtgagtggcac
agtaatagcaccggggcaatggcttcccaactgcatgtcctgtgcggccgcctcgtacgg
gccctcactgttatcatggatcccaagtccagtcaggaggggcggcaggaagcgcacaag
ttctgcgaggagttcaaggagagaagccccctctgtgtgccctgtggcctgcagctgtcc
aaccggagccattccccctgcgtccggcacttcggcctgcacgtcttggagcatgttata
aagtttcggtggaacgtcatgagtgtggatgacagggtgtttgtaaagaacagtgtgatg
cttctcatttctcatggaatccaccccatcctggaggagaaagggcacattaaggatgtg
attgctcgcgttgtagtagagatcatcaagagagagtggccctggaactggccggacatg
gtcaacgagctggcctgtctcggcaattttggggatgcacagatggaactggtgatgttc
atccttctgcggttggctgaagaaattgggccattagaaacccgacccatatgtcagccg
aaagatcttcacgaattactcaaggaaaatatggacaaaatatttgcgtttgtggtgacc
attctgcagcggtgtgtgccgaattgccagaacctgacacagggccagttccgcgtggct
gcagctgctctccgcaccctggccggatatatcaagtgcctccctactcgccttataatg
gctgataactgtactctgctatggctgctgtgtgtgctgctgaatgttcctgagctacaa
atggaggcagccgagtgtcttctctttgcagtcaacaagaagggactgctgctggaggaa
cgagtcccgctcctgatattatttagggaagatgctttacgatacatcctgactgcggca
caactggcagacagtgaccctttgcaggagaggaactatgttatcctaaagatgattggc
caaatcctttgtgacctgggcaatcagctctgcgctcaggtcactgcgtttgaagtgaag
accccagagaactttgacagataccttgaagccctgctgagcctcacccgacaccccagc
ctgtttctcacatctttggctgctgaggtgtgggggactctgttcaatcacagggtgctg
tcccacgacccccagcttacagcagccatacctgatgtgcttcgagccgctatggtcagc
attgtaaaggtgggttacccatcaatggataacagtcccagctgtgaatactcccgaatg
gacttcgacgatgatatagagttcaatacgtttttcctctcatttcgcaaacagatgggg
attgtggtgagatccctgtgtcgcctggacacaagaacagtattgcacgtggctacagag
tggatgcgccaccagctgtctgctccgctggatccgggaccacataatgctacatctgga
gaggcgctgtgcagcccccactctccttccttcctgcattgggaagcaatgtcctttttc
tgcagtgaagtcttcgctccgctctgccgccccctgtctgcagaggaggtgctgcttact
cagggtgtcagtcttctccagcaagtcatcagctatgagaccaaggatcctcttattgtg
tcctgtgtcctcaccaacctgtcgacccttctgccattcatccgtcacgggagcgacctc
ttgccattgatggtgtccaagctcctcagtgcggctgggtttgcagatacagatgccgtt
aaggtgcccagaacgttactaatgaatatccgtagctgcgccagcgccctcctccaaacc
atctgcattcgtttcccagacctagttgggcctcactttgaggttttgcatacccgtatt
aaggccctattggggcaggagcagctgctagccgacgctgagagatgtgccctgatgggg
gctcttgttctggccagcaaccactttaaaaactacaacagacagagatccatcttggag
gaattgctccagcctgcggtctccatgttgctctctgaggaaatgcagagagtgctttct
ggccccagcgagttcatttcctttctgagagccaacaatccagggagtgagaatcaagaa
gaaggggttgatggcggccgcctaagttactccaagctctgttactgcgcttacaccttt
ttggctgcgataaggaaatcacggaggccaataatatttaaggaagccaaagccgggggg
ttcgttaaaggctgtaccccagatggtgttgcaatgttacagaacccctgcgcaggggaa
ctgctgaaagtcctggaccgtctgctggttctgatcaggacaatgaacagcctgtacctt
ccagaagtaatgaccaaaatggcagaaaccagtctcaaaatggcagaaaccagtcagtct
tgtgagcttgagatggggaacaaaagcatcatggattgcagccagcccatcatgggtgag
tctggtcccccagtgaccatgccggagcagctacagggcccttacaactcgctgtataaa
gcctgctgccagatactgggaaagtgcggcccctccatgccacatgagttctactccgtt
cctgacttggcttctcgtctgctcagctctgcctttaccaacctcgactacgtgtctgac
ctccatcttagacatatagtgattgatttggtgacaccactcattttttattgcccttca
aagaagtaccaaagtgtggccctaccgatcctggggcctctcctgatgagcctgtaccag
agattgtcccaaaaatggctgtgtatcaaccagagaacaacagcgagtgaggaggatcta
ttggaggaagagagcgagtcccaagatgacctgatggtgaggctgctgagccggacagtg
gtgcagttcatttatatttgctgtatggcctcacacacaacatatcagagtgatgccgat
tatagaattgccccccgtgtggaacaggcagaagcagatgaagaagaggaaaatctgatc
cttatggcagcagcggccaaggtgctgaaatccctagcactctcaaagctggggcagttc
ctgctgagtaatgaggaggtttacacggcactgctgctaatggcctacagctccctgatg
tggaaggatccacagacgtgtaatatggcagccactcggctgtgttggtccctgctcagc
cagatgatggccgtctccctgccggctgatgccgctgtctgttattttgccagtgtgctg
ggtgggctacaggctaatggccactgtaagtcctgcacggaccctctggttcgcttggcg
ttcaggttctacgtggcgctgcgccctaagtaccccgagctgcatgggctgatggagcag
gttccgaatatccagcgagataccttggagcggtttgataaaaatctgttgtcccccgat
ctggagataaacgagagaatgtgcagggagcaattcgccaagctcctctcggggtgcact
gagaagccgctggccgaccagttctacaaagtccacatccaacacttacccgctgggttc
aagggaacatctggaccagtcttggaacctgattctgtgccaatcagttgcgagagctcc
ctggaccctactcactga
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