Xenopus tropicalis (tropical clawed frog): 100486635
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Entry
100486635 CDS
T01011
Symbol
cdhr5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100486635 (cdhr5)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Cadherin related
100486635 (cdhr5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100486635
NCBI-ProteinID:
XP_031756477
Xenbase:
XB-GENE-6460149
UniProt:
A0A8J1JF31
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All DBs
Position
4:31959069..31989129
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AA seq
1015 aa
AA seq
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MGSILALFILLFLPIGCMAQGCKVNNTRVEIPENNPVGYVVTTIQTDPGYSMTVSDNIEW
FEIKGTQLLLKQSLDYETNTTHDVSLLCERGGTTENNIRVYVTVLNVNDNPPVFKYSTYT
FTIPEDTKVNTPIGEAIEAEDLDLDRIFYVLTGPVQEAAFFRLTSINNPVILVNQNLDYE
KFNHVQLILTARDTPTVGESPSHTATATININIEDLDNKPPQFLPCQIINGICINVGYTT
KVNRSEKETGALVLQPGPLYAIDGDTGINTPIEYLVLAGNDAGIFAVDKFSGNITMTKAA
DTLGIIFLQIMAAQVNDGQKFATTSLTIDVVERNHHPPKFEKQNYFGTIQVQSATGTSVT
DSSSPNRLLQVFAADEDFEDRMNPYITYTIQGTTDFSVSRNGFIKNDAVFNSPTKVAFTV
LATDTVTREEDITNVEVEITPSVTTIVTTTTTTRTTAHGPGTTTTTTSGTGTTTSTLPGT
GTTIITTSGTGTTTTTTPGTGTTTSTTPGTGTTTSTTPGTGTTTSTTPGTGTIMSTTHGT
GTTTTTSPGTGTTTSTTHGTGTTTTTSPGTGTTTSTTHGTGTTTTTSPGTGTTTSTTHGT
GTTTTTSPGTGTTTSTTHGTGTTTTTSPGTGTTTSTTPGTGTTTSRSPGTGTTTTISPGT
GTTTSTTPGTGTTTTTTPGTGTTITTTPGTGTTTTTTPGTGTTTTTTPGTGTTTTTTPGT
GTTTTTTPGTGTTKSTIPGTGTTTSKIPGTGTTKITTPGIGKPTTNVPGISSTTSKSPTA
TNTDKPAGTTHSPAESTVGSGKGYSATDMAALGATLGVILALCLVGLGFLIHKQYGDQIR
NRMRKSSGDDFGGSEDRTEQLIDDDDADDDPNPGSSDVMPTSISYDTDGNISKDPLVTDY
LVLGASAANLFANENSSNIPNAEKPEEGSDSDDKKEVKSILTKEFKEDPGYKSVWFREDA
SPEVVVIDGVEEGEVDDGETEEEYNQEDDDDDDDEDDLSPDFLGMNNDSNNFSQL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggggtccattttggccctgtttatactgcttttccttcctataggatgcatggcacaa
ggatgtaaggttaacaacaccagggtggagattccggaaaacaaccctgtaggttacgta
gtgacaactatacaaacagatcctggctacagcatgactgtctctgacaacattgaatgg
tttgaaattaaaggcacacagttgctactgaagcaatcccttgattatgagactaataca
acgcacgatgttagtctcctttgtgaaaggggtggcacaacggaaaataatataagggtt
tatgtcacagtgctaaacgtcaatgacaaccctccggtgttcaaatatagcacatacacc
ttcaccatcccagaggatacaaaagtgaacactccaattggggaagcgattgaagctgag
gacctcgacctggacaggatcttttacgttctgacaggaccagttcaggaggcagctttt
tttaggctcacctcaatcaataaccctgttattctggtgaaccagaacctggattatgag
aagttcaatcacgtgcagcttattctgactgcccgggatactccaactgtgggtgagagt
ccttctcacacggccactgcaactataaatataaacatagaggatctggataacaaacca
ccacaatttctgccatgccagataattaatggcatctgcatcaatgttggatatacaaca
aaagtaaatcgatcagaaaaggagacaggggcgctggttttgcaaccaggtccattatat
gcaatagatggagatactggcattaatactcccattgagtatttagttcttgctgggaat
gatgcaggaatatttgccgtggataaatttagtggaaatataacaatgactaaagcagca
gatactttggggataatatttttgcagattatggctgcccaagttaatgatggacagaaa
tttgcaactacttcattgacaattgatgttgtggaaagaaaccaccaccctccaaagttt
gaaaagcaaaattattttggaacaatccaggttcagtctgccactggcacatctgttacc
gattccagtagccccaacagactcctacaagtgtttgctgcagatgaagattttgaagat
cggatgaatccatatatcacatacacaattcaaggcacaactgatttctcagtgtcccgg
aatggatttataaaaaacgatgctgtatttaactctccaactaaagtagcatttactgta
ctggcaactgacaccgtgacgagagaagaggacatcactaatgttgaagtggaaatcacc
ccaagtgtcaccactattgttactacaactacaacaacaagaactacagctcatggacca
ggtaccactacaactacaacctctggtacaggcaccactacttctacacttcctggaaca
ggtaccactataattacgacttctggaacaggtaccactactactacaactcctggaaca
ggtaccactacaagtacaactcctggaacaggcaccactacaagtacaactcctggaaca
ggcaccactacaagtacaactcctggaacaggcaccataatgagcaccactcatgggaca
ggtaccactacaactacttctccaggaacagggaccacaacaagcaccactcatgggaca
ggtaccactacaactacttctccaggaacagggaccacaacaagcaccactcatgggaca
ggtaccactacaactacttctccaggaacagggaccacaacaagcaccactcatgggaca
ggaaccactacaactacttctccaggaacagggaccacaacaagcaccactcatgggaca
ggaaccactacaactacttcaccagggacaggtaccacaacaagtacgactcctggcaca
ggaacaactactagtagatctccagggacaggtactactacaacaatttctccagggaca
ggtaccacaacaagtactactcctggaacaggtaccacaacaactaccactcctgggact
ggtaccacaataactactactcctgggactggtaccacaacaactaccactcctgggact
ggtaccacaacaactaccactcctgggactggtaccacaacaactaccaccccagggaca
ggcactacaactactaccactcctgggactggtaccacaaaaagtacaattcctggaaca
ggtaccactacaagtaaaattcctggaacaggcaccaccaagattaccacacctgggata
ggtaagccaacaaccaatgtacctggaataagctctactacttctaaatcacctacagca
accaacacggataaaccagcagggacaacgcacagcccagcagaaagcacagtcggatca
ggaaagggttacagtgccacagatatggctgccctgggtgccaccctcggagtgattctg
gccttgtgcttggttggacttggattcctcattcataagcagtatggggatcaaataaga
aacaggatgagaaaaagttctggtgatgactttgggggctctgaagataggactgaacag
ctcatagatgacgatgatgcagatgatgatcctaatcctggttcttctgatgtaatgcct
accagtatcagttatgatactgatggtaacatttccaaagatccattagtaacagattat
ttagttttaggggcctctgcagcaaatttatttgcaaatgagaattcatcaaatattcca
aatgcagagaaaccagaagaagggtctgattcagatgacaagaaagaagtaaagtccatc
ctcacaaaagagtttaaggaagatccagggtataaatctgtgtggtttagggaggatgcc
tcaccagaggttgtagtgattgatggggtcgaggaaggagaagttgatgatggtgaaact
gaggaagaatataatcaagaagatgatgatgatgatgatgatgaagatgacctgagcccc
gatttccttggaatgaacaacgactcaaataatttctcccaactttaa
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