Xenopus tropicalis (tropical clawed frog): 100486685
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Entry
100486685 CDS
T01011
Symbol
c20orf194
Name
(RefSeq) uncharacterized protein C20orf194 homolog
KO
K25424
dynein axonemal assembly factor 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100486685 (c20orf194)
04812 Cytoskeleton proteins [BR:
xtr04812
]
100486685 (c20orf194)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Dynein assembly factors
100486685 (c20orf194)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
100486685 (c20orf194)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAAF9_N
CobW_C_DAAF9
SIR2_2
Motif
Other DBs
NCBI-GeneID:
100486685
NCBI-ProteinID:
XP_002936411
Xenbase:
XB-GENE-988245
UniProt:
F6QE24
LinkDB
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Position
1:13793647..13853448
Genome browser
AA seq
1171 aa
AA seq
DB search
MSFLRPLSVGRSRRYQRCSPAESCSRLRKIQEILNKKSKSIPDGILCILGIDSRYNEGCK
ELANYLLFDLYSQRNTDFERTAFPEEVLDDVIILIKLDSVHLYCNPVNYTYLLPLVGCWR
NLHFHCMSDGEYEDEEAAEEYKIASFVNMVRDCGQIGIPYSCRGHLQTFDMFIVEKWPIV
QAFALEGIGGGGFFTMKHELMDVSELLWKVYSDMDPVLLESLIMEDLTTFEHQWTNLFSH
FETEIPFVLELSECQAGEPFRSYFSHGMLSSHIAEPSPCRQPFVLFGTHSTRENLKPGNF
IFPSEGHLVRNTGPGGSTAKHMVAQCVSPKGPLACSRTYFFGSTHIPYLGKDNDVQKKNE
HITLLSQIYAAVVEAVLAGIASYAKSLSPSKAKEVAEQTLWAKLDLVNLLHIKSSLRSKV
TFQIEAVNSLGRIVPLDDGLHLVNTASMAVYDIPDVQNGRGCLGSVVFSESFLKSQINVK
EKDGTVSTDNSFTILTAAIPRFLSWLVEDNEVKLSEKAFSTVKEEKSFLGSFISSGDGTY
MCPGSLQIGPEEGKLCFFSDGILFLHPYHGSVTISRNHVNSIKLYDGNSSTVAAALIVEY
KSSLTPHLPIHFNVASGFLTFALMPKSKSYRTFYSQVLPVWQKCTDNSEFHVQVIQEDQL
SSEQKQIYLNMQNLYEALSYPTAERWTRLKMASASLPGIESFFQHLGVSSVGRVPIPRVH
LPVVLQHSEPATPNNPENEKMTITIVSGLPGSYCNELCVSLVSLQTEYGSFRWNVYRQPS
DSMEDFASVHFQRHLSNVLEVKRKHGVHKAAFFRRNIRMLVVLDGYSDVLDVVQALQTHS
DPEVRSSYIIGAVAACVNPLSCFMEHRFTFPKFLEQCSQGIVSSVVITSLTTEQRHPNFV
LLQKLIRAANPGAAFILAEKGMVTRNEDIELIMSDSSFSNPQMLRARYLMYPGWFEGQFS
SGAAFPKMDQICVRFSRPLEKARFMTRCKAIKSSIKTFPFSGNLYHIVGRVLFSDAEQRM
EVCHDTLVNSLRLAPVEDGPSPPPDPKRDQRETNQPCMLVFTGCSLKEEDIKDWLRQCAK
QKPQKKLLRTRGTLTLQEMRGIHARHHLDPLPQGYFYNGTQFVNFLGEKMDYHPLMDQFI
YDYLHEANQEIEKYNKELEAQEYFDIFGQKL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcctccgtcctctgtcagtagggagaagccgccgctaccagcgctgctctccg
gctgaaagttgcagtcgtctaagaaaaatacaagagatcctcaacaaaaagagcaaatcg
atccctgatggaattctctgcattttaggaattgacagtcggtacaatgaagggtgcaag
gagcttgcaaattacctgctcttcgacttgtatagccaaagaaacacagactttgaaaga
acagcatttcctgaagaagtcctggatgatgtgataatacttataaagcttgatagcgtc
cacctctactgtaatcctgtgaactacacatacctgctgccacttgtgggatgttggaga
aatttacatttccattgcatgtcagatggagagtatgaagacgaggaggctgcagaagaa
tacaagatagccagctttgtcaacatggtccgcgactgtggccaaatagggattccttat
agctgcagaggtcacctgcaaacctttgacatgtttatagttgagaagtggcccattgtg
caagcttttgccctggagggtattggaggtggcggattctttacaatgaaacacgagtta
atggatgtcagtgagttgctttggaaggtttacagcgacatggaccctgttctcttggag
tccttgataatggaggatttgaccacatttgaacatcagtggacaaacttgttttcacat
tttgaaactgaaatccctttcgttctggagctgtccgagtgtcaggcaggagagccattc
agaagttatttcagtcatggaatgctttctagccatattgcagaacccagtccctgtaga
cagccttttgttctcttcggcactcactccactagagaaaatctgaagccgggcaacttt
atctttccatccgaaggccacctggttagaaacacgggccccggggggagcacagccaag
cacatggtggctcagtgtgtttccccgaaaggacctttggcttgttccaggacttacttt
tttggaagcactcatatcccttacttaggaaaagataacgacgtacaaaagaaaaacgag
cacattaccctgctatcgcaaatatacgctgctgtggtggaagctgtgcttgctggtatt
gctagctatgccaaatctttaagcccatcaaaggcaaaggaggtagcagagcagactctc
tgggcgaaattggacttggtgaaccttctgcacataaaatcttcattaaggtctaaagta
acatttcaaatcgaagctgtgaatagtcttggaaggattgtgccattggacgatgggtta
catttggttaatacagccagcatggcagtttatgacattccagacgtacaaaatggaaga
ggatgtttaggatccgtcgtgttttccgaatcattcttgaaatcccaaatcaatgtgaaa
gagaaagatggaactgtgtctacagataacagcttcaccattctcactgctgccattcca
cgcttcctatcatggctggtagaagacaatgaagtaaaactgtcagagaaagcattcagc
acagtaaaggaagaaaaatctttccttggcagttttatttcgagcggtgatggcacttat
atgtgccctggaagcttgcaaattggtcctgaagaaggtaaactgtgtttcttttctgac
ggcattctctttctccatccctaccatgggagcgtcaccatttcaaggaatcatgtgaat
tctattaaactgtacgatggaaactctagcacagtcgctgctgcactcattgttgaatat
aaaagctccctgacgccacacctaccgattcatttcaatgttgcttctggcttcctcacg
tttgcacttatgcccaagtcaaagagctatcggactttctactcgcaggtcctccctgtg
tggcagaagtgtacagataattctgaattccacgtacaagtaattcaggaagatcaactg
tcctcagaacagaaacaaatttacctgaacatgcagaatttgtatgaagcactgtcctat
ccaacagcagagagatggactcgcctcaagatggcgtcggcaagccttcctgggatagaa
agtttcttccagcaccttggagtgagcagtgtgggaagggtgccaatcccaagggtgcac
cttccagttgtactccagcattctgagcctgctactcctaataacccagagaatgaaaag
atgacaataacaatcgtgagtggactgccggggagttactgcaatgaactctgcgtctct
ctggtttccttacaaacagaatacggaagcttcagatggaacgtctaccgccagccttcc
gacagcatggaggattttgccagcgtgcactttcagcggcacctctccaacgtcctggaa
gtgaagcggaaacacggcgtccataaggctgctttcttccgccggaatatccggatgctt
gtcgtgttagatggatactcagatgtgcttgatgtagtgcaggccctgcagactcactct
gaccccgaagtcaggtcctcgtatatcattggggcagtcgccgcctgtgtgaatcccctg
agctgcttcatggaacacaggtttacatttccaaagtttctggagcagtgctcacaaggt
attgtgagcagcgtggtcattaccagccttactactgagcagaggcaccctaactttgtg
ctactccagaaactgatcagagcagccaaccctggggctgcatttattctagcagagaag
ggaatggttaccaggaatgaggatattgagctgatcatgtcggacagtagcttctccaac
ccacagatgctgagagctcgctacctgatgtaccctggatggttcgaagggcagttttca
tctggcgctgctttcccaaagatggatcagatctgtgtgaggttcagccgtcccttagaa
aaagcacgctttatgacacgatgcaaagcaatcaagagctccataaagaccttcccattc
agtgggaacctgtaccatattgtgggaagagtgttattttcagatgctgagcagaggatg
gaagtgtgccatgacacgttagtcaactcattgcgtctcgccccggtggaggacggtccc
agcccacctcctgatccgaagcgcgatcagcgagagaccaatcagccgtgcatgctggtg
tttactggttgctcccttaaagaagaagacataaaggattggctgagacagtgcgccaag
cagaaaccacagaagaagcttttgagaacaagaggaacactgactcttcaggaaatgcgc
ggtatccatgctcggcatcatctggatcccctccctcaaggctatttctacaacggaact
cagtttgtaaacttccttggggagaaaatggactatcatccattaatggatcagttcata
tacgactatctacacgaggcaaaccaagagatagaaaagtacaacaaagagctggaagca
caggaatacttcgacattttcgggcagaagttgtga
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