Xenopus tropicalis (tropical clawed frog): 100486843
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Entry
100486843 CDS
T01011
Symbol
atrn
Name
(RefSeq) attractin
KO
K24332
attractin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xtr04091
]
100486843 (atrn)
Lectins [BR:
xtr04091
]
C-Type lectins
Others
100486843 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_5
EGF_LMN_ATRN
Lectin_C
Kelch_6
CUB
Kelch_4
PSI
EGF_TEN
NANM
Kelch_2
EGF_Teneurin
PSI_integrin
EGF_laminin
EGF
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
100486843
NCBI-ProteinID:
XP_002936412
Xenbase:
XB-GENE-953934
UniProt:
F6QBN7
LinkDB
All DBs
Position
1:complement(13667207..13752482)
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AA seq
1352 aa
AA seq
DB search
MPGHSRGGERRWLVAVLLLMAGTRISGTAGKECEKPCVNGMCQPSTGQCACDPGWTGEQC
QHCGGRFMLTGPSGFVTDGPGNYKYKTKCTWLIEGSENTVLRLRFNHFATECSWDHLYVY
DGDSIYAPLVAAFSGLIVPEQESNNSVPEVAITSGYALLHFFSDAAYNLTGFNISYNVDA
CPNNCSGRGDCTQNPDGNVYCDCAEHWKGEACDIPYCLDNCGFPTHGICDFNNTKSCICR
DGWQGPSCDVSIPANESFWVREENLHPKLARASHRAVVVDDVMWIVGGYMFNHSDYQMVM
AYDLPSHKWLSLNNSVNSVVVRYGHSLAPYKDKLYMYGGKIDATGNVTNQLYVFHIHNQS
WVQILPKAKDQYAVVGHSAHIVTLKDGSVVMLVFFGHCPLYGYISSIQQYSLDTNLWEIV
QTHGALVQGGYGHSSVYDEKSRSIYIHGGYKAFTANKYRLADDLYRYSVDNQTWMILKDS
QSFRYLHTAVIISGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDFACDYWSVLPHPMFQY
DVSVDRFGHSAVLRNGTMYVFGGFNSLLLSDVLTFTPRSCETYKSENACMVAEPGIRCVW
NASLLLCSSWENATPEQEELISCPNKTIADNEKCDQYTDCFSCTVNSHGCQWCNDHCISL
NSNCTVLQGAISVYEQCPKNNPGFYCNKKTSCKSCAMDQNCQWEPKNQECIGLPENICGA
NWHLVGSSCFRITSAKDNYDNAKLACRNQNAYLASLTSQKEVEFVIKHLQRLQPKTDLTP
WVGLRKINVSYWCWEDMSPFSNTTLQWQQGEPSDAGFCGYLAEPSVGGLKAATCIHQING
SVCERPANYSAKQCRTPCASRGSCGECTSGSSECMWCSNMKQCVDSNAYVASFPFGQCME
WYTMSTCPPENCSGYRTCAQCLEHPGCGWCTDPSNTGKGQCMEGSHRGPMKMPNSSHVTN
TTPVLNVSMCPAENHYNWSFIMCPACQCNGHSKCVNESICEKCENLTTGKNCESCISGFY
GDPTNGGSCQPCKCNGHASMCNTNTGKCFCTTKGVKGEECQLCEVENRYQGNPLKGTCYY
SLLIDYQFTFSLSQEDDRYYTAINFVATPEEQNRDLDMFINASKNFNLNITWATSFTAGT
QAGEEIPIISKTNIKEYKDSFSNEKFDFHNNPNITFFVYVSNFTWPIKIQIAFSQHSNFM
DLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLIREMQQMASRPFASVNVALET
DEEPPDLIGGSIKTVPKPIALEPCCGNKAAVLSIFVRLPRGLGGIPPPGQSGLAVASALV
DISQQMPLAYKEKSGAARNRKHQPPAQPGTCI
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccacagccggggaggggagcggaggtggcttgtggccgtgctgctgctaatg
gccgggacgcggatctctgggacagcggggaaggaatgcgagaagccgtgtgtgaacggg
atgtgccagcccagcaccgggcagtgtgcgtgtgatcctggctggaccggagagcagtgc
cagcactgcgggggccgctttatgttaactggcccgagtgggtttgttacagacggacca
ggaaactataaatataaaacaaagtgcacgtggcttatcgaagggagcgagaatacggtg
ctccgacttcgctttaaccactttgctacggaatgcagttgggaccacctttacgtctat
gatggggattccatatacgcgcctcttgtggcggctttcagcggcctgattgttccagag
caggaaagcaataattcagtcccagaagttgccatcacgtctggatacgcactgttgcat
tttttcagtgacgcagcgtacaatctgactggattcaatatcagctacaacgtggatgcc
tgccccaataattgttcggggagaggcgactgcacccagaatcccgatggcaacgtttac
tgtgattgtgccgagcactggaagggagaggcctgcgatatcccctactgcctggataac
tgcggattccccacccatgggatctgcgacttcaacaatactaaaagctgcatttgcaga
gatggctggcagggccccagctgtgacgtgtccattcctgcaaatgagtccttttgggtc
cgggaagaaaacctgcaccctaaactggcacgagcgtcgcacagagcagtggtggtggat
gacgtgatgtggattgttggaggctacatgttcaaccactccgactaccagatggttatg
gcatatgacttgccctcccataagtggctgtcgctaaacaactctgttaactctgtggtt
gtgcgctacggacattccctggcaccgtacaaggataaactctacatgtacggagggaaa
atagatgccacgggaaacgtcacaaaccagctgtacgtcttccatattcacaaccagtca
tgggttcagatcctccccaaggccaaggaccagtatgcggtggtggggcattctgcccac
attgtcaccttgaaggatggcagcgtggtgatgcttgtcttctttggccactgccctctg
tacgggtatatcagcagtatccagcagtactctctagataccaacctctgggagatagtt
cagacgcatggggcactcgtacaaggcggatatgggcacagcagtgtgtatgatgaaaag
tccagatccatatatatacacgggggctacaaggctttcaccgccaataagtatcgctta
gccgacgatctgtacagatactctgtggacaaccagacgtggatgattctcaaagacagc
cagtccttccgatatttgcacacagcagtgatcattagcggcactatgctagtgttcggc
ggcaacacccacaatgacacttcgatgagccacggggccaagtgcttctcctcagatttc
atggcatacgactttgcctgtgactactggtcggtgcttcctcaccccatgttccagtat
gacgtcagcgtggatcgcttcggccattcagctgttttgaggaacggcacaatgtatgtg
tttggaggattcaacagtctcttgctcagcgatgtgctgacgttcaccccgagaagttgt
gaaacatacaaaagtgaaaatgcctgcatggtggccgaaccggggatccggtgtgtgtgg
aacgccagcctgttgctatgttcttcgtgggagaacgccacccccgagcaggaagagttg
atctcgtgtcccaataagacaattgcagacaatgaaaagtgtgaccaatacacagactgc
ttcagctgcacagtgaattcccacggctgccagtggtgtaacgatcactgcatctccctc
aacagcaactgtaccgtacttcagggtgctatatctgtgtatgaacagtgtcccaaaaac
aacccaggattttactgtaacaagaagaccagctgcaagagttgtgcaatggatcagaac
tgccagtgggagccgaagaaccaggagtgtattggcctgccagaaaacatctgcggggca
aattggcatttggttggaagctcctgctttcggatcaccagcgccaaggataactacgat
aacgccaagctggcctgccgcaaccagaatgcctacctggcctctctcaccagccagaaa
gaagtggaatttgttataaagcacttgcagaggttgcagccgaagacagaccttaccccc
tgggttggactccggaagatcaatgtatcgtactggtgctgggaagacatgtctcccttt
agcaacaccaccctacagtggcagcagggagagccaagtgatgcaggcttctgcgggtac
cttgctgagccttctgtcgggggcctgaaagcagcgacttgtatccatcaaatcaacggc
agtgtctgtgaaaggccagccaattacagcgctaagcaatgccgaaccccttgcgcatcg
cggggcagctgtggggagtgtaccagcggcagctcagaatgcatgtggtgcagtaatatg
aagcaatgtgtggactccaatgcttacgtggcttccttcccatttgggcagtgtatggag
tggtacacaatgagcacctgtccaccggagaactgctcagggtatcgcacctgtgctcag
tgcttggagcaccctgggtgtggctggtgtacggacccaagtaacacgggcaagggccag
tgcatggagggatcacataggggccccatgaagatgcccaacagctcacatgttactaac
acaacgccggtcctgaatgtcagcatgtgcccagctgagaaccattataattggtctttc
atcatgtgtccagcatgccagtgtaacgggcacagtaaatgtgtcaatgaaagtatctgt
gagaaatgcgagaatctaaccacaggcaaaaactgtgaatcctgcatatctggcttttat
ggggatcccactaacggaggatcctgtcagccctgcaagtgtaacgggcatgcgtcaatg
tgcaacaccaacacgggcaagtgtttctgtaccaccaaaggagttaaaggggaggagtgt
cagctatgtgaagtggaaaatcgatatcaaggcaacccccttaagggaacgtgttactat
tctttgctgatagattaccagtttaccttcagcctgtcccaagaagatgatcgttactac
accgcaattaattttgtggcgaccccagaggaacaaaacagggacttggacatgttcatc
aatgcgtccaaaaacttcaacctcaatataacgtgggcgacgagcttcacagcgggcacc
caggcaggagaagagatccctattatctccaagaccaacataaaggaatacaaggacagc
ttctccaatgagaaattcgacttccacaataatcccaacatcaccttctttgtctatgtc
agcaacttcacctggccgattaaaattcagatcgcgttttcccagcacagcaactttatg
gacttggtacagttctttgtgacatttttcagctgtttcctctctctgctcctcgtggct
gccgttgtctggaaaattaagcagagctgttgggcttcaagaagaagagagcaactcatc
cgggagatgcagcagatggccagccgaccttttgcttccgtcaacgttgccttggaaaca
gacgaggagcccccagatctgattggggggagtataaagaccgttcccaaacctatagcc
ctggaaccctgttgcggtaacaaagcagccgttctgtcaatatttgtacggcttcctcgt
ggcttagggggtatcccacctccgggtcagtctggtctggccgtggccagcgccctggta
gacatctcccaacagatgcctttagcctacaaagagaaatccggagcagcgcgaaaccgg
aagcaccagccgcccgcacagcccggaacctgcatttga
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