Xenopus tropicalis (tropical clawed frog): 100486846
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Entry
100486846 CDS
T01011
Symbol
syk
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04625
C-type lectin receptor signaling pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100486846 (syk)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100486846 (syk)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
100486846 (syk)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
100486846 (syk)
Protein kinases [BR:
xtr01001
]
Non-receptor tyrosine kinases
SYK family
100486846 (syk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7063
ABC1
Kdo
SH2_1
DUF4348
Haspin_kinase
RIO1
Motif
Other DBs
NCBI-GeneID:
100486846
NCBI-ProteinID:
XP_002937073
Xenbase:
XB-GENE-978184
UniProt:
A0A6I8RKY0
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All DBs
Position
1:138441090..138476528
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AA seq
631 aa
AA seq
DB search
MADIAQNLPYFFGNITREESEDYLRQAGAADGLYLLRQSRSYLGGYALSVAHGRHFYHYT
IERELNGTYAISGGISHSSPAELCHYHTLESSGLVCLLKKPCNRLPGVQPKTGPFEDLKE
HLIREYVHQTWNLQGEALEQAIISQKPQLEKLIATTAHEKMPWFHGRISREDSEQLLISG
VKSNGSFLIRERDDNGSYALCLLHDRKISHYRIDRDKTGKLSIPDGKKFDTLWQLVEHYS
YKPDGLLRVLTEPCPRATGHSESFIFKRAPCPAPPTQHQMSWSAGGIISRFKSYSFPKPG
NKKMTLSTAGAPRRHGSSTSINTYVHRPNAEVTMDSMPMDTDVYRGIYEDPDEFRPMDGK
ISREQLTLFETELGSGNFGNVKKGELKTSKSKKPVAVKILKNDSNDESMKDELLKEAKVM
QLLNNPYIVRMLGICEGESWMLVMELAGLGPLNKFLVKNKNVTEHNVTELVHQVSMGMKY
LEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALESDENYYQAKTAGKWPMKWYAPESL
NYHKFSSKSDVWSFGVLMWEAYSYGLKPYPGMKGNEVTAFIESGNRLECPRRCPAEMYNL
IKLCWTYKTEERPSFAVVELKLRSYYYDSSH
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattgcccagaatctgccatacttttttggcaatattactcgtgaagaatct
gaagattacttgaggcaagctggtgcagctgatggcctgtatctgttgcgtcaaagtcgt
agctaccttggtggttacgctctatcagtggcacatggcagacatttttaccattatact
attgaaagagagttaaatgggacttatgcaatttcaggtggcatatctcatagcagccct
gctgaactgtgtcattatcacacactagagagcagtggacttgtctgcttgctcaagaaa
ccatgcaatcggctacctggtgttcaaccaaaaaccggaccatttgaagatcttaaagaa
catctcatcagagaatatgtacatcaaacatggaatttacagggtgaagctctggaacaa
gctattatcagccagaaacctcagctagagaagctaattgccacaaccgcacatgaaaaa
atgccatggttccatggaaggatttcacgtgaagattctgagcagttacttatcagtgga
gtaaaatcaaatggatcttttctaataagagaacgagatgataatggatcatatgcccta
tgtctgctacacgacagaaagatttctcattaccgtattgaccgagacaaaactggaaag
ttatccataccagatgggaagaaatttgatactctctggcagctggttgaacattattcc
tacaaacctgatggacttctgcgggttcttacagaaccatgcccccgagcaactggacac
agtgaaagctttatatttaaacgtgcaccatgtccagcacctcctacccaacatcaaatg
agttggtcagcaggtggaattatctcgagattcaaatcctactccttccccaagcctggc
aacaaaaagatgacactgagtactgcaggggctcccaggcggcacggaagttctacatca
ataaatacttatgtacataggccaaatgcagaagtcacaatggattctatgcctatggac
actgatgtctatcgaggaatatatgaagacccagatgagttcagacccatggatggcaaa
atatctcgggaacagcttactttgtttgaaactgagctaggctctggcaactttggaaat
gttaagaaaggagagttaaagacatcaaaatctaaaaaaccagtagctgtcaaaattctc
aaaaatgacagcaatgatgagtcaatgaaggatgagctgctcaaagaagccaaagtcatg
cagctgcttaataacccttacattgtgaggatgcttggaatctgtgaaggggaatcgtgg
atgcttgtcatggagctggcaggactcgggcctctaaataagttcttggttaaaaacaag
aatgtcacagaacataatgtaacagagcttgtacatcaggtttccatgggaatgaagtat
ttagaagaaacaaattttgtccacagagacctggcagcacgaaatgttttgctggtcaca
caacattatgccaaaatcagtgatttcgggctttccaaagcacttgaatctgatgaaaat
tattaccaagcaaagactgcgggtaaatggcccatgaaatggtatgcccctgaatcatta
aactatcataagttttcaagcaaaagtgatgtatggagctttggagttctgatgtgggag
gcatattcctatggtctaaagccatatccgggaatgaaaggtaatgaagtgacagctttt
attgaatctggaaaccgcttggagtgcccgcgacgttgtcctgcagaaatgtacaattta
attaaattatgttggacatataagacagaggagcgaccatcttttgctgtagttgaactg
aaactgcgcagttattattatgatagttctcactga
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