Xenopus tropicalis (tropical clawed frog): 100486910
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Entry
100486910 CDS
T01011
Symbol
lrfn1.2
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100486910 (lrfn1.2)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100486910 (lrfn1.2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
LRR_5
ig
Ig_2
fn3
LRR_9
V-set
C2-set_2
Sp38
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
100486910
NCBI-ProteinID:
XP_002940406
UniProt:
A0A803JGT6
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Position
8:81001591..81035494
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AA seq
644 aa
AA seq
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MGAFFLLMITLTAGVAVAQICPKRCLCQNLAPSLAILCAKTGLLFVPSVIDPRTVELRLT
DNFITVIRRRDFTNMTRLLHLTLSRNTISHITPYTFADLRGLRALHLDNNRILSMGDEQL
KGLQNLRHLILSNNQLSTISPGSFQDFVGTLEDLDLSYNNLVKVPWETISKLMNVNSLSL
DHNLIEYVPGGVFTNLHKLARLDMTSNKLKTIPPDPLFLRIPVYAKSKGSPLSSLVLGFG
GNPLHCNCELLWLRRFTREDDLETCASPSNLMGKYFWSISEEEFMCDPPVVTHHSMRTSV
LEGEGVVLKCKAVGDPEPSIHWVSPEGKVVSNSSRAVSYENGTLEITITTVRDSGSFTCI
ASNTAGDATASVELVVSPLPHPANASQRHHRLDKGPSDILTPAKPGAAQNESSSHSDRKV
VMMHHSHNSALIQWFLDRNIPGIRMYQIQYNSSSDESLIYRMINPSNKSFLVNDLAPGRE
YDLCVLAVYDDGMTALTATRLVGCVQFSTQEESGQCQPLHTQFLGGTMIIIIGGIIVASV
LVFIIILMIRYKVYSGQEEVGKTRVSNVYSQTNGHQAMACAHSCAKLSGGAEELPLTIEF
ATAEEVPSNKINKHTCEKSSYAPEQGSKALEEKSTSSEWTDINI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggggctttcttccttttgatgatcacccttactgcaggagttgctgttgcacagatt
tgcccaaaaagatgtctgtgccagaatctggctccatccttagctatcctgtgtgccaag
actgggctgctctttgtgccatcagtcatagaccctcggacagtggaactcagactcact
gacaattttattacagtcatcagaaggagagacttcacaaacatgaccagactgcttcac
ctcactctctccaggaatactatcagtcatatcaccccatacacatttgctgatctccgg
gggttgagagcattgcatctggacaataaccgtattctctccatgggagatgagcaactc
aaaggtctgcagaatttgagacatctcattcttagcaacaaccaactcagcactatttct
ccaggctcattccaggattttgttggcaccctggaggatctagacctttcatacaacaac
ctggtgaaggtcccttgggagaccatatctaagttgatgaatgttaactccctgagcctt
gatcacaatctaattgaatatgttccagggggggtcttcaccaacttgcacaaactagct
aggttagatatgacctccaataagctgaagaccattccccctgaccctttgttcctacga
attccagtttatgccaagtcaaaaggatcacctttgtcctcacttgtacttggatttggt
ggaaacccattgcactgtaattgtgagctgctgtggctccggcgcttcaccagagaggat
gatctggagacatgtgcttccccatctaaccttatgggaaaatatttttggagtatttcc
gaggaagagttcatgtgtgacccaccagttgtaactcatcactcaatgcgtacatcagtt
ttggaaggagaaggagttgtgctaaaatgtaaggctgtaggagaccctgaaccctcaatt
cactgggtgtcaccagagggtaaagtggtatcaaactcatccagggctgtctcatatgag
aatggaacactggaaatcactatcacgactgtaagagactctggctcctttacttgcatt
gcctccaatacagccggggatgccacagcatctgtggagttggttgtcagtccccttcct
cacccagctaatgccagccaaaggcaccacaggctagacaaagggccttctgacattctc
acaccagcaaaacctggagctgcacaaaatgaatccagcagccactcagatagaaaggtg
gtaatgatgcatcacagtcacaactcagctttaattcagtggtttttggatcgaaatata
ccagggattcgcatgtaccagattcaatacaacagttcttctgatgaaagcctcatatac
aggatgatcaacccaagtaacaagagcttccttgtcaatgacctggcaccgggacgtgag
tatgacctctgtgtccttgctgtgtatgacgacggaatgaccgctctaactgcaacacga
ttagtaggctgtgtccagttcagcacacaggaggagagtgggcagtgccagccactccat
actcaattcctgggaggtaccatgattatcattataggaggaattattgtggcatctgtg
ctagtgtttatcatcatcctgatgatcaggtacaaggtatacagtggccaagaggaggtg
ggaaaaaccagagtaagcaatgtgtattctcagaccaatggacatcaagctatggcatgt
gcccactcttgtgccaagctgagtggaggtgctgaggagctgccccttactatagagttt
gctacagcagaagaggtgccatccaacaaaataaacaagcatacatgtgagaaaagcagc
tatgctccagagcagggaagcaaagcattagaggagaagagtacttccagtgagtggaca
gatattaacatctga
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