Xenopus tropicalis (tropical clawed frog): 100486967
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Entry
100486967 CDS
T01011
Symbol
krt12.6
Name
(RefSeq) keratin, type I cytoskeletal 47 kDa isoform X1
KO
K07604
type I keratin, acidic
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100486967 (krt12.6)
04147 Exosome [BR:
xtr04147
]
100486967 (krt12.6)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100486967 (krt12.6)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100486967 (krt12.6)
Exosomal proteins of other body fluids (saliva and urine)
100486967 (krt12.6)
Exosomal proteins of colorectal cancer cells
100486967 (krt12.6)
Exosomal proteins of melanoma cells
100486967 (krt12.6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
DUF4446
Peptidase_Mx
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
100486967
NCBI-ProteinID:
XP_002940696
Xenbase:
XB-GENE-6489513
UniProt:
A0A7D9NLG7
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Position
10:8078550..8086956
Genome browser
AA seq
518 aa
AA seq
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MTSIRQSRSMGGGGSNMSVRKSVQTFQRVGSAGGGGGFAGGYGGGMAGGAGGMVMNGVGY
GDFEGGYGVECNEGFGAGGFGGGFGGGAGGVYGGGAGGGFGGGAGGGFGGGAGGGFGGGA
GGGFGGGAGGGFGGGFGGGFGGRGPGGFEGLLATNEKHTMQNLNDRLANYLDKVKALETD
NNDLEKKIREWYEKLRPESGGVGTVDYSKYLPIIEDLRKKIMESTLENAKILLQTDNARL
AADDFRLKYENELALRQSVEADINGLRRVLDELTLCKADLELQIESLTEELAYLKKNHKE
ELDALRGGPAGQLTVEMNAAPAVDLTKLLNDMREQYETLAEKNRRETEARFNEQSKDIKK
EILAGVQQVQSNTTEISDLKRSLQGLEIELQSQLAMKQSLEKTLAETEGRFCSQLGQLQN
LITSVEEQLFQLRNDMELQSNEYKQLLDIKTRLEQEIETYRKLLEGEGGKLLAGMSDGKT
PSDSSKDSSRTRRVKMVIEEEVNGKVISSSVREIEEKH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattcgccagtcacggtcaatgggtggtggcggctccaatatgtccgtcagg
aaatcagtgcaaacctttcagagagtaggaagtgcaggtggaggtggtggatttgctggt
gggtatggagggggaatggctggtggagctggaggtatggtgatgaatggtgtaggatat
ggtgattttgaaggtggctatggagttgaatgtaatgaaggttttggagctggaggtttt
ggtggaggatttggtggaggagctggtggggtatatggtggaggagctggtgggggattc
ggtggaggagctggtggtggattcggtggaggagctggtggtggattcggtggaggagct
ggtggtggattcggtggaggagctggcgggggattcggaggaggatttggtggaggattt
ggtggcagaggacctggtggcttcgaaggcctcctggcaaccaatgaaaagcataccatg
caaaaccttaacgaccgcttagccaattacctggataaggttaaggctttggaaaccgat
aataacgatcttgaaaagaaaatacgagagtggtatgaaaaacttcgccctgaatccggc
ggtgtgggaaccgtagactacagtaaatacttaccaataattgaagatctcaggaaaaag
attatggaaagcactttggaaaatgccaagattctcttacagactgacaatgcccggctg
gcagctgatgacttcaggctgaagtatgagaatgagctggcccttcgccagagcgtggaa
gccgatattaatggcctacgtagagtgctggatgagctgaccctgtgcaaggctgatctg
gaattgcagattgaaagcttgactgaggaactggcgtatctgaagaaaaatcataaggag
gaactggatgctctacgaggtggacctgctggccagctcactgttgagatgaatgcggct
ccagcagttgacctgaccaagttactcaatgacatgagggagcaatatgaaaccctggct
gaaaagaacagaagagaaacggaggcccggtttaatgagcagagcaaagatataaagaaa
gaaatcttagctggagtgcagcaagtacagtccaacactacagagatctcagatctgaaa
cggtcccttcagggattggagatagagcttcagtcacagctggcgatgaaacaatcattg
gagaaaaccctggcagaaacggaaggacgcttctgttctcagcttgggcagctacagaac
ttaatcacaagtgtggaggagcagctgttccaactgagaaatgacatggagcttcagagc
aacgagtacaaacagctgctggacatcaagacccggttagagcaggagatagagacatat
cgcaagttgctggaaggagagggaggaaaactgctagctgggatgtcagatggaaaaact
ccttcagattcttccaaagattcatccaggacaagaagagttaaaatggtcattgaagag
gaggtgaacggaaaagtgatttcttcgagcgtccgcgaaatcgaggagaaacactag
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