Xenopus tropicalis (tropical clawed frog): 100487062
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Entry
100487062 CDS
T01011
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487062 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
100487062 (rorb)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100487062 (rorb)
Nuclear receptors [BR:
xtr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100487062 (rorb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100487062
NCBI-ProteinID:
XP_002940077
Xenbase:
XB-GENE-484846
UniProt:
A0A6I8RCU8
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Position
1:131197714..131336154
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AA seq
458 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSNISNGLSNLNNDTGGTYANGHVIDLPKSEYYSVDSAQPSPDQSGIDMTGMKQIKQE
PIYDLTSVPNLFMYSSFNNGQMSPGISMSEIDRVAQNIIKSHLETCQYTVDELHQLAWQT
HTYEEIKIYQNKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLE
VVIVRMCRAFNPLNNTVLFEGKYGGMQMFKSLGSDDFVNEAFDFAKSLCSLQLTEEEIAL
FSAAVLISPERPWLIEPRKVQKLQERIYFALQHVIQKNHLDDETLAKLIAKIPNITALCN
LHGEKLQVFKQTHPEIVNTLFPPLYKELFNPDSSTSCK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggagataaatcatcaggaatt
cactatggtgtcatcacgtgtgaaggatgcaagggattcttccgacgaagtcaacagaat
aacgcctcttactcctgcccgcggcagagaaactgtctaattgacagaactaacagaaac
cgctgccaacactgtagactgcaaaagtgtcttgccctaggaatgtctagagatgctgta
aaatttggaagaatgtcaaaaaaacagagggacagtctatatgctgaggtccagaaacac
cagcaacgattgcaagaacagagacagcagcaaagtggagaggcagaggccttagccagg
gtttatagtagtaacattagcaatggtttgagtaatctcaacaatgacacaggaggcact
tatgccaatggacatgtgattgaccttcccaaatcggagtactacagtgtggattctgct
cagccctccccggatcagtctggtatagacatgactggaatgaaacagatcaaacaagaa
cccatttatgaccttacctccgttccgaacttatttatgtatagttctttcaacaatgga
cagatgtcaccaggaataagcatgagtgaaatagatcgagttgcacagaacatcataaag
tcacatttggagacatgtcagtacacggtggacgaactacatcagctagcatggcaaacg
catacctatgaagaaattaaaatataccagaataagtcaagggaagctttgtggcagcag
tgtgccattcagataacccatgcaatccaatacgtggtagagtttgctaaacgaataaca
ggtttcatggaactttgccagaatgatcaaatattgctacttaagtccggctgcttggaa
gttgttatagtacgaatgtgccgtgccttcaatccactaaacaacactgttctatttgaa
ggaaaatatggagggatgcagatgttcaaatcattaggttcggatgattttgtaaatgag
gcattcgactttgcaaagagtttatgttccctccagttaactgaggaggagattgccttg
ttttctgcagcagtactgatatcaccagagagaccttggctgatagaaccaagaaaagtc
cagaagctccaagagagaatttattttgcacttcagcatgtgattcagaagaaccactta
gatgatgagacactggcaaagctaatagccaagataccaaacataactgcactttgcaac
ttgcacggagagaagctgcaggtttttaagcaaactcatcccgagatagtgaatacactg
ttccctccattgtataaagagcttttcaatccagactcaagcactagctgcaagtga
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