Xenopus tropicalis (tropical clawed frog): 100487096
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Entry
100487096 CDS
T01011
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100487096 (aff2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100487096 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
100487096
NCBI-ProteinID:
XP_002934593
Xenbase:
XB-GENE-952102
UniProt:
F6WY12
LinkDB
All DBs
Position
8:57084440..57417127
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AA seq
1256 aa
AA seq
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MDLFDFFRDWDLDQQCHYEQDRSALKRKEWERRTQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHNNQSHLVGIPKNSVPQTPAPVEKNEQSFFPDQRNRL
APCHQSSSHPSSSMPPPSSLAPNTTLTHNHEGSRKSRVDWAHGGHTSSCTQSNQLSNQPS
RLKHTSSHDLLQIRYEDLYNCQNDQYKSGVIDELIPATSSSHSRRHNHPKALSGEHVFKE
NAHSKSPVDSETLGHGSVSPLPSTSLLAANNSLSSQNFPPGIHSKTSMVQQKPTAYVRPM
DGQDQVPNDSPELKPSTEIDDGYNNPLFGTLLEGKVNVPVTKSKLPKLTIPQGNEVSLPN
DPNCVEEILREMTHSWPPPLTAIHTPCKAEQTKFPIPSKESQHLTSGYNVQKRCDATNKT
TAKSAPQKSMLEDDLKLSSDEEDSEQANEKTKPRNIPVNGLPLQAVHGANLVNSSGGSGS
SSESESSSESDSDSESSSSDSECNEQARSATPEPEPPSTNKWQLDKWLNKVNPHNKTIIS
SQNDVHSENNSETQNNQQAEGKEKTELDNITSQPDSKELLSPVREKSKPRATQKNPDSKP
LKQKSPAPNEPITQRATAKKQPKKVERTSSVEENTWNKPNPTCSTPKEKEVRETPEQPKT
RTKTTVAKTAPRKEQRTSTGSSSEKKKTRGTSKNVPKSREFVETDSASDSNTDQEEVLQV
KISTACSGPPNPIKSKDCSGNILSVSSLTSNSSSISVDQTNNDLEEHFFSPLPVVQTELL
SPLRDFEEVKSLWVKIDLTLLSRIPGQETFDVLPLKSDPRESGFKHKHQIMNTAVEKSST
KSRRKHKQTESSDTQSDNKRQRLEDNTPPCLLPPCISPIPSTRITSTKETKRTTKKREEK
VFPPLLSPLGDEPICRRHSSDNGSFSQESNVTTSMHTASTNTRHRKNSNMAANAKISCEE
DHSRPASCVIENIDHDHSEPDIWSTETTLTNGNIDYRRSKITFDDTLHNADYYMQEAKRL
KHKADALMEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKN
FTGSAATEGEKKLVVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNSSKSSQAPSPW
GGNGKNTETPSPMSLSPSPVNTAGNSTGTGASSSTGTVSIPQRIHHMAASHVNITNNVLR
SYEHWDMADKLTKENKEFFQDLDTVMEPLTQHSSMTYLVRYVRQGLHWLRIESHLL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttccgagactgggacctggatcagcagtgtcattatgaacaa
gatcggagtgctcttaaaagaaaagaatgggagagaaggacacaagaagtccaacaagat
gaagacctgtttgcttctggctttaatctgtttggagaaccatacaagacaaacaaaggg
gatgctcttgcaaaccgtgttcagaacaccttgggaaattatgatgaaatgaaggactta
ttaacaaatcacaacaatcagagccatcttgtaggaattccaaagaattcagtgccacag
acaccagctccagtagagaaaaacgagcagagcttttttccagatcaaagaaacaggctg
gccccatgccaccaaagcagtagccatccatcatcctcaatgccacctccctcttcgttg
gccccaaatacaactttgacgcacaaccatgaagggtctaggaagtcacgagtggattgg
gcccatggaggacacacttcttcttgtacacaatctaaccaactcagcaatcaaccaagc
agattaaaacacacttcttcacatgatttactacaaataagatatgaggacctttacaac
tgccaaaatgatcaatacaaaagtggtgttattgatgaactcatacctgctacatcatcc
tcacactccagaaggcacaaccaccctaaagcattaagtggggaacatgtctttaaagag
aatgctcattcaaaatcaccagtagactctgaaaccctaggacatggttctgtctctccc
cttccatctacatcattattagctgcaaacaacagcctttcctcccagaactttcctcca
ggaatacacagtaaaacaagcatggtgcagcaaaaacctacagcttatgtaaggccaatg
gatggtcaggatcaagtacccaatgactctcctgaactaaagccatcaactgaaatagat
gatggatataacaatcctctatttggaacactgttagaggggaaagtcaatgtacctgtt
actaagagcaaactgccaaagcttacgattccccaaggaaatgaggttagtcttccaaat
gatcccaactgtgtagaagaaatcttacgggaaatgacacattcatggcctcctccgctg
actgcaattcacaccccatgtaaagctgagcagaccaagtttccaattcctagtaaggag
tctcaacatctgacctcaggatacaatgtacaaaagagatgtgatgccactaacaaaacc
acagcaaaatctgctccacaaaaatctatgcttgaagatgacttaaagctcagcagcgac
gaagaagacagcgaacaggcaaatgaaaaaacaaagccaagaaacattccagtaaatgga
cttcctttgcaagcagtgcacggtgccaaccttgtgaattccagcggaggctctggaagc
tcaagtgaatctgagagcagctcggaatcagattctgatagtgagagcagctccagtgac
agtgagtgcaatgaacaagcacgcagtgcaacccctgagcctgagccaccttctacaaac
aaatggcagctagataagtggctaaataaagttaatccacacaataaaacaataattagc
agtcagaatgatgttcattctgaaaacaattcagagactcaaaataaccagcaggctgag
ggaaaagagaaaacagaacttgacaatattacttctcagcctgattccaaagaattactg
agcccagtaagggaaaaaagcaaaccaagggccacccaaaaaaaccctgactcaaagccc
ttaaaacagaaatcaccagctcccaatgaaccaatcactcaaagagcgactgctaaaaag
cagccgaaaaaggtcgaaagaacttccagtgtagaagaaaacacatggaacaaaccaaat
cccacttgcagcactcccaaagaaaaagaggtacgggaaaccccagagcaaccaaaaaca
aggacaaagaccactgttgctaaaactgctcctagaaaagaacaaaggactagtacagga
agttcttctgaaaaaaagaaaaccaggggaaccagcaaaaatgtccccaaatctagagaa
tttgttgagacagattctgcatctgattccaacacagaccaagaagaagtgcttcaggtt
aaaatctcaacagcatgcagtgggcctcctaatcccatcaaatcaaaggactgcagcggc
aacattttaagtgtaagcagtttaaccagcaatagcagtagcatatctgtagatcaaaca
aataatgacttggaagagcattttttctcccctcttcctgttgttcagactgagctcctt
tcacccttgcgggattttgaagaagttaaatcattatgggtcaaaatagatctcacgttg
ttatcaaggatacccgggcaagagacttttgatgtgttgcccttgaagagtgacccaaga
gagtcaggttttaaacacaaacatcaaataatgaacacagcagtggagaaaagttccaca
aaatccagaaggaagcacaagcaaactgaaagctctgatacgcagagtgataacaaaagg
cagagactggaggacaacactccaccatgtttacttcctccctgtatatctccaataccc
agcaccaggatcaccagcactaaagaaacaaaaaggacaacaaagaaaagagaggagaaa
gtgtttcctcctctgctgtcaccattaggcgatgagccaatctgtagaaggcattccagt
gataatggctccttcagccaggagagcaatgtcacaacctctatgcatacagccagcact
aatacacggcacagaaagaacagcaatatggcagccaatgcaaaaataagctgtgaggaa
gatcacagcaggccagcgagttgtgttattgaaaacattgatcatgatcactcagaacca
gatatatggtcaacagagactacattaactaatggaaacattgattatcgaagatcaaaa
ataacttttgatgatacgttacataatgctgactattacatgcaggaagctaaaagactg
aagcacaaagctgatgcactgatggagaagtttggcaaagctgtcaattatgcagatgct
gccctctctttcattgagtgtggaaatgccatggagcgagatccattagaagctaaatcc
ccatacactatgtattcagagactgtggaactcatcaggtatgccatgagactgaagaat
ttcacaggctcagctgccactgaaggagaaaagaagttagtggttttatgctaccgatgc
ttgtcattactctacttgagaatgtttaagctgaagaaggaccatgctatgaagtactcc
agatcactcatggaatattttaagaactcctcgaaatcttcacaagcgccctctccatgg
ggaggcaatggaaaaaatactgagacaccatctccgatgtcacttagcccttctcctgtg
aacactgctggaaatagtactgggacaggagcttcctcatccactggcaccgtatccatc
ccccagaggattcatcacatggcagccagccacgttaatatcactaacaatgtcttacgg
agttatgaacactgggacatggctgacaaacttacaaaggaaaacaaagagttctttcaa
gaccttgatacagtgatggagcctttaacacaacacagctctatgacctacctggtccgt
tatgttcgtcaaggacttcactggttgcgcatagaatctcacttgttgtag
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