Xenopus tropicalis (tropical clawed frog): 100487129
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Entry
100487129 CDS
T01011
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3A
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100487129 (mex3a)
04121 Ubiquitin system [BR:
xtr04121
]
100487129 (mex3a)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100487129 (mex3a)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100487129 (mex3a)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100487129 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
KH_KhpA-B
KH_2
Prok-RING_4
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
100487129
NCBI-ProteinID:
XP_031746582
Xenbase:
XB-GENE-5910152
UniProt:
A0A7D9N0H1
LinkDB
All DBs
Position
8:143009737..143030190
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AA seq
466 aa
AA seq
DB search
MPSLVVSGMMERNGVMAELGKDRVLEDDRALQIALDQLCLLGLGESEEDSNNNNSSGSSS
GSGQPHKGESKLCALYKEAELRLKSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNT
YIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTAFGSAPTLPGQV
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
ETHIAVRTGKILEYNNENDFLSSSPDSGMESRYPESWRVHGTATGCKPLSTFRQNSLGCI
GDCPPEPVYETPRLNDQNDFNYGYLFPNYKQEVYYGVPESGGPMWGGQENTNPAPGIFTK
QQRSGSSGSVQTTTTTQRSPENSLSTLQRRSQGEALPGFTKLTATRNSISGSRECMVCFE
SEVTAALVPCGHNLFCMECAVRICERNEPECPVCHASATQAIRIFS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcctggtggtatcagggatgatggagcggaatggggtgatggcagagctgggc
aaggacagggtgctggaggatgacagggcgctgcagatcgcgttggaccaactgtgcctg
ctgggactgggggagagcgaggaggacagtaacaacaataacagcagcggcagcagcagc
ggctccgggcagccccacaagggcgagagcaagttgtgcgccctgtacaaggaggcagag
ctgcggctcaagagttccaacaccaccgagtgcgtcccggtgcccagctcggaacacgtg
gctgagattgtggggaggcaaggttgcaagatcaaagcgctacgagccaaaacgaacacg
tacatcaagacgccggtgcggggcgaagagccagtgttcatggtgactggtcgcagggag
gatgtggcgatggcccgacgtgagattatttccgccgctgagcacttctccatgatccgg
gcatcccgtaacaaggccggcacggcattcggcagtgcccccaccctccccgggcaagtg
accatccgggtacgagtcccttacagggtggtcggcttagtggtgggacccaaaggagcc
accatcaaaaggattcagcagcagacgaatacttacataatcaccccgagtcgggacagg
gaccccgtgtttgagatcaccggagcccccggcaacgtggagcgggcgcgggaggaaatc
gagacccacatcgcggtgcgcaccggtaagatcctagaatacaacaacgagaacgacttc
ttgtccagcagccccgactccgggatggaaagccgctaccccgagagctggagggtgcac
ggaaccgccactgggtgcaaacccctctccaccttccgccagaacagcctgggctgcatc
ggagactgcccaccggaacccgtctatgagaccccaaggctgaacgatcaaaatgacttc
aactacggctatttgttccccaactacaagcaagaggtgtactacggcgtgccggaatcc
gggggtcccatgtgggggggacaggagaacaccaaccctgcccccggtatctttacaaag
caacaacgttccggcagcagcggcagcgtgcagaccaccaccaccacccagcgatcacca
gaaaacagccttagcaccctgcaaaggagaagccaaggggaagctctgccaggctttacc
aagctcaccgccacccggaactctatctctgggagccgggagtgcatggtgtgttttgag
agtgaagtcaccgctgcactggtgccctgtgggcacaacctcttctgcatggaatgtgcc
gtacgcatctgtgaacgcaacgagcccgagtgcccagtgtgccacgcgtctgctactcag
gccatccgaatattttcttaa
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