Xenopus tropicalis (tropical clawed frog): 100487237
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Entry
100487237 CDS
T01011
Symbol
bbx
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487237 (bbx)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100487237 (bbx)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100487237
NCBI-ProteinID:
XP_002932333
Xenbase:
XB-GENE-981428
UniProt:
A0A803K8Y3
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Position
2:103505114..103570820
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AA seq
962 aa
AA seq
DB search
MTERKPKTQRIRMKEPWGMSRSGVTLCNGEQIGCAGRRSLSHDKEIKIELPFCSSICLSW
CIVMKGSVKNKDHSTDGEGAGKRPKRKCLQWHPLLANKILDFSEEDEEEEDEEDIDKVQL
LDGDGLENDETEDNDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWA
YLDPNEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKAHSPTVTTRKKLWSFSSETVK
DVPSPKKVPQEDEMPQLNFSIADPTQMGGLSMLLLAGEHALTAHGDHAVTERVEHLLSDH
EVSSGICPLTESGFPQENRDTSLFQFDEISSSTSHSDDPAPAEQSEKSTLFQFAEISSDT
SQTQINCVDPAKCCGNSSLFQLAEISSSSSHSDSSASAKQCGTSALFQLAEMCEASEAVK
IEISRNVDTDDLVRTPVSIKEEIESSSEDLISRNLNDSSHICEKAETNNIKTKKHKAHTL
EPIDAELLGLLKREKLKKKKKKNKSDHDAAEKASPKKTCKKRQSSESDIESVMYTIEAVA
KGDWGIEQIPISPSKKARISTSPKHSIFDLKSAKKKVKSKEKKMQKDKPSDSTKELSAPE
HIITAPIIDLPSETPESVKSEPPSPTEELPPMCLPEMLKTEDFNSNKKTETCGSRKSERS
CKGALYKTLVSEGMLTSLRANVDRGKRNSGKGCLSDHEGCWNEDSWAFNQTGTTGSKKLK
KTKPKEESTLGLAKLEEEFEKKFNSLPQYSPVTFDRKNASLPRKKKKTGNGIAEPQKANK
GVFQPQKKTFFHKIVNKYKHKKDKQIISDKAIAEEKNNRENSPRANNFVSASSIPEFTAI
QEPLVGSQKRKARKTKITHLVRSMDGQTSLKGQISDEKPLSSICEEEGSCRGELLISRET
EVEQNNSIAQDMPAVSAFFSLAALAEVAAMENAHRSPRGSLSRDGQKKEMSQAAVLISCA
DQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaggaagccgaaaacacagcgaattcgaatgaaggagccatggggaatgagc
cgatcgggggtcactctctgtaatggagagcagatcgggtgtgctggcaggaggtcattg
tcacatgacaaagagatcaaaatagagttaccattctgttcttccatttgcctttcttgg
tgtatagtcatgaaaggcagtgtgaaaaataaggaccattctactgacggagaaggagct
ggaaaacgaccaaagagaaaatgcctccaatggcacccactgcttgcaaacaaaattctt
gacttttctgaagaagatgaggaagaagaggatgaagaagatattgataaggtccagctt
cttgatggtgatggtctagaaaatgatgaaacagaagacaatgattctagtgaacaaaga
gcacggaggccaatgaacgctttcctcttattttgcaaacgtcatcgttccctagttcgt
caggaacatcctcgtctggataatcgtggtgctacaaaaatactggcagattggtgggcc
tatctcgaccctaatgagaagcagaagtacacagatatggctaaagagtacaaagatgca
tttatgaaagcaaatcctggttacaagtggtgtcctacaactaataaacccgtcaaagct
cattcacctactgtaactaccaggaaaaaactgtggtcctttagctcagaaactgtcaaa
gatgttccaagccccaagaaagtcccacaagaagatgaaatgccacagcttaattttagt
attgcagatcccacacaaatgggaggactgagtatgctgcttcttgctggtgaacatgcc
ttgactgcacacggggatcatgctgtgactgaaagagtggaacatttattaagtgatcat
gaggtttcttcaggtatttgtcctttaactgaatcagggtttccccaggaaaatagagac
acttcattatttcagtttgatgagatatcttccagcacatcacattcagatgacccagca
cctgctgaacaaagcgagaagtcaacactgtttcagtttgccgagatatcttcagatact
tcacagacacagattaattgtgtggatcctgcaaaatgctgtgggaactcttcccttttc
caattagcagagatatcttcaagttcatcccattctgattcatctgcatcagcaaagcag
tgtggaacatcagcattgtttcagcttgcagagatgtgcgaggcttctgaagctgtcaaa
atagaaatatccaggaatgtagatacagacgatttggtaagaacgcctgtgtccataaag
gaagaaatagaaagctcatcagaggacctgatttctagaaacctcaatgatagttcacat
atctgtgagaaagcagaaactaataacattaaaactaaaaagcacaaagcacacacccta
gaacctatagatgctgaacttttaggacttctgaaacgggaaaaattaaaaaagaagaag
aagaaaaacaaatcagaccatgatgctgcagagaaggcatccccaaagaaaacctgtaaa
aaaaggcaatcatcggagtctgatattgaaagtgtcatgtacactatagaagctgtcgca
aaaggtgattggggcattgagcaaattcccatttctccaagcaagaaggcacgcatttct
actagccccaaacacagcatttttgacttaaagtcagcaaagaaaaaagttaaatcaaaa
gaaaaaaaaatgcagaaagataagccctcagacagtaccaaagagctgtcagcgccagaa
cacataattactgcaccaatcatcgatttaccttccgagactcctgaaagtgtcaaatca
gagccaccttctcccactgaggagctgcctcccatgtgcttgccagaaatgcttaaaact
gaggactttaacagcaataaaaagacagaaacttgtggttcaaggaaatcagaacggtct
tgtaaaggagctctttataagacactggtgtctgaaggcatgctgacatcactgcgggcc
aatgttgacagaggtaaaagaaactcaggaaagggctgcttatcagaccatgaaggatgc
tggaatgaagacagctgggcattcaatcaaactggaaccactgggagtaaaaagctgaaa
aaaactaaaccaaaggaagagtcgacacttggattagcaaagctggaagaagagtttgaa
aagaagtttaacagccttcctcagtacagccctgttacatttgatcgcaaaaatgcatca
cttccaaggaagaagaaaaagactggaaatggtatagctgagccacaaaaagccaataaa
ggtgtattccagcctcagaaaaagaccttttttcacaaaattgtaaacaagtacaagcac
aaaaaagacaaacaaattatttcggataaagccatagcagaagaaaaaaacaacagggag
aactcacccagagccaataattttgtatcagcttccagcattccagaatttacagccata
caggagcctctggtaggaagccaaaaaaggaaagcaagaaaaacaaagataacccacctt
gttagatctatggatggtcagacatcattaaaaggacagatttcagatgaaaaaccactg
tctagtatttgtgaagaagaggggtcctgcagaggtgaactcttaatctctagagaaact
gaagtggaacagaataatagtattgcccaagacatgcctgctgtgtctgcatttttcagt
cttgctgctctggccgaggtagctgcaatggaaaacgctcacagaagtccaagaggatct
ctttcccgagatggacagaagaaagaaatgtcccaggcagctgtgctgatttcatgtgct
gaccagtaa
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