Xenopus tropicalis (tropical clawed frog): 100487245
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Entry
100487245 CDS
T01011
Symbol
slc4a8
Name
(RefSeq) electroneutral sodium bicarbonate exchanger 1
KO
K13859
solute carrier family 4 (sodium bicarbonate cotransporter), member 8
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100487245 (slc4a8)
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
100487245 (slc4a8)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
Ski2_N
CPT
Motif
Other DBs
NCBI-GeneID:
100487245
NCBI-ProteinID:
XP_002933752
Xenbase:
XB-GENE-6050275
UniProt:
F6QPK3
LinkDB
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Position
2:142708244..142798392
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AA seq
1096 aa
AA seq
DB search
MPAGSNEPECALSYQRSDEEAIVDQGGTSSVLNIHYEKEELEGHRTLYVGVRMPLGRQSH
RHHRTHGQKHRKRDRMKGVIQEEGHDESSAHDTPSQRVQFILGTEDDEEHVPHELFTELD
EICVKEGEDAEWKETARWLKFEEDVEDGGERWSKPYVATLSLHSLFELRSCIINGTVQLD
MRANTIEEVADMILDHQDSANELGDNIRVKVKEALLKKHHHQIEKKRNNLIPMVRSFAEV
GKKQSEPHLLDKNSLSVSPQPTPSTLDVKNGGSHENSSSVDLSKVDLHFMKKIPTGAEAS
NVLVGELDFLERPIVAFVRLSPAVLLTGLTEVPIPTRFLFILLGPVGKAQQYHEIGRSMA
TIMTDEIFHDVAYKAKDRGDLLAGIDEFLDQVTVLPPGEWDPSIRIEPPKNVPSQEKRKM
PGVPNGNVCHVEPEPEPEHSGPELQRTGMIFGGLVADIKRKAPFYLSDYRDALSLQCVAS
FLFLYCACMSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSLFAGQPLTILGSTGPV
LVFEKILFKFCKEYGLSYLSLRACIGLWTAFLCIFLVATDASSLVCYITRFTEEAFASLI
CIIFIYEAIEKLIHLGETYPVNMHSQLDKLTLYYCKCAAPASPTNDTLLYWRENNITITE
AEWANFTVSECNKMHGEFVGPACGHHGPYTPDVLFWSCILFFTTFALSSVLKTFKTSRYF
PTKVRSMVSDFAVFLTILTMVVLDYVIGVPSPKLQVPNEFKPTRDDRGWLVNPIGPNPWW
TVFPTIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDLLVVGLMLGICSIMGLP
WFVAATVLSITHVNSLKLESECSAPGEQPKFLGIREQRVTGLMIFVLMGCSVFMTTVLKF
IPMPVLYGVFLYMGVSSLRGIQFFDRLLLFAMPAKHQPDFSYLRHVPLRKVHLFTIIQLT
CLVLLWVIKASPAAIVFPMMVLALVFVRKVMDFCFSDRELSWLDDLMPESKKKKLDDAKN
KAKELEESEKMLHEGEDKGVQLPLETRKLLSSPGKNNNSRGDPSEINISDEMPKTTVWKA
LSMNNESSKSKEKSFF
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaggaagcaacgagcccgaatgtgcactcagctaccagagatctgatgaagag
gccattgtagatcagggtggaactagctcagtacttaatattcactatgaaaaagaagaa
cttgaagggcacaggaccttgtatgtgggagttcgaatgccattggggcgtcagagtcat
agacatcaccgcacccatggacagaaacacaggaaaagagatagaatgaaaggagttatt
caggaagaaggtcatgatgagtcttcagctcatgatacaccatcccagcgagtgcagttt
atccttgggacagaggatgatgaggaacatgtaccacatgaactttttactgaactggat
gagatttgtgttaaagagggtgaagatgcagagtggaaagagacagcaaggtggcttaag
tttgaggaagatgttgaagatggcggcgaacgatggagcaaaccctatgtggcaactctt
tccctgcatagcctttttgaattaagaagttgcatcatcaatggaacagttcagttggat
atgcgtgcaaacaccatagaagaagttgcagacatgatattagaccatcaagattcagcc
aatgaattaggcgataacatccgtgtgaaagttaaagaagctcttttgaagaaacaccac
catcaaattgagaagaaacgcaacaatcttataccaatggtgcgttcatttgctgaggtt
gggaagaagcaatctgagccccatttattagacaagaatagtctgtctgtctctccgcag
cctaccccctctacactggatgttaaaaatgggggaagtcatgagaacagcagttctgta
gatttaagcaaggtggaccttcacttcatgaaaaaaatacctactggtgctgaagcttcc
aatgtccttgttggggagctcgattttctagaaaggcccattgttgcatttgtgagactt
tctccggctgttcttctcactggactgactgaggtaccaatccctacaaggtttcttttt
attttgttgggaccagtaggaaaagcacagcaatatcatgaaattggcaggtcaatggca
acaataatgactgatgagatctttcatgatgttgcttacaaagcaaaagataggggggat
ttgttagctgggatcgatgagtttttggatcaagttactgtgctcccccctggtgaatgg
gatccatcgattagaattgaaccaccaaagaatgtcccttctcaggaaaagaggaaaatg
cctggtgttccaaatggaaatgtttgccatgtggagccagaaccagaaccagagcatagt
ggacctgagctccaacgtacaggaatgatttttggagggctagtggcggacataaaacgt
aaagctccattttacttgagtgactacagggatgcgcttagcttgcagtgtgtggcctca
tttcttttcctctactgtgcctgcatgtctccagtaattacatttggaggtttgcttgga
gaagctactgaaggccgcataagtgcgatagaatccctctttggtgcttctatgacagga
atagcatactccttatttgctgggcagcctctcactatacttggaagtacagggcccgtg
ctggtgtttgagaagattttgttcaaattttgcaaagaatatggcttgtcatatctctcc
ttgagagcctgcattggcttgtggacagctttcctctgcatttttcttgtggccacagat
gccagctctctggtctgctatatcacacgctttacagaggaagccttcgcctcgctgatt
tgcatcatatttatttatgaagccatagagaagttaatacatttgggagagacatatccg
gtcaacatgcattctcaactggacaaacttactctttattattgtaagtgtgctgctcct
gcaagtccaaccaatgacactttactgtactggagggaaaataacatcacaataactgaa
gcagagtgggccaacttcacagttagtgagtgcaataaaatgcatggggagtttgtgggg
cctgcttgtggacaccatgggccatatactcccgatgtcctcttctggtcctgtatcctg
tttttcactacatttgcattatccagcgttttgaagacatttaaaacaagccgctacttt
ccaactaaggttcgctccatggtgagtgactttgctgtcttccttactattctgacaatg
gtagtcctagactacgttattggtgtgccatctcccaagcttcaggttccaaatgaattt
aagccaacacgagatgacagaggatggttagtaaatccaattggaccaaatccttggtgg
actgtgtttccaactataattcctgcactcttgtgcaccattctgatattcatggatcag
cagataactgcagtgattatcaacaggaaagaacataagctgaaaaaaggatgtggatac
catttggacctgctagtggtgggacttatgctggggatctgttcaataatgggattgcct
tggtttgtggcagccactgtactctctatcacacatgttaacagcctaaagttagaatca
gaatgttcggcccctggggagcagcctaaatttttgggaatccgagaacagagagtcaca
ggcttaatgatctttgtgctgatgggctgttctgtgtttatgactacagtgctaaagttt
atccctatgcccgttctgtatggagtatttctctacatgggagtctcctcactgcgggga
attcagttctttgatcgcctgctgctctttgcaatgcctgcaaaacaccagccagatttt
agctacctgagacacgttcctttacgcaaagtgcatctcttcaccattatacagctgacc
tgcttagtattgctgtgggtcattaaggcttccccggctgccattgttttccctatgatg
gttcttgcactagtgttcgtccgcaaagttatggacttctgcttctctgatcgggaactg
agctggctcgatgacttgatgccagagagtaagaaaaagaaactggatgatgcaaaaaac
aaagctaaagaattggaggaatctgaaaagatgctacatgaaggagaggacaaaggagtt
caacttccactggaaaccagaaaattactcagcagcccaggaaaaaacaataattcaaga
ggtgatccatctgaaataaatatttctgatgaaatgcctaaaactacagtatggaaggct
ctcagcatgaacaatgaaagttcaaaatcaaaggaaaaaagttttttttaa
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