Xenopus tropicalis (tropical clawed frog): 100487319
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Entry
100487319 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100487319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487319
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100487319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf_UBZ
zf-LYAR
Zn-ribbon_8
zf-C2H2_6
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
100487319
NCBI-ProteinID:
XP_031760093
UniProt:
A0A8J1JQD3
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Position
6:complement(4965634..4971370)
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AA seq
596 aa
AA seq
DB search
MEPRRLEGKWENEESDTEEPLPAIKREVDSDSGAALHGPVSPLLAASPEEELEILQIKIK
EEEPESEDDLNPMEILAVGASRLPDETRTWIDLRGSQEEEHEDSLERLKEWSEASEVILG
DRVQTRAESGTRDEDDSASANGSGFICSKCGKCFSASSDLLTHLCASHNHQQIHTGEKPF
SCPECGKCFSQKTHLQRHQKTHTGEKPFTCAECGKNFTQKITLVKHQAIHTGEKPFMCIE
CGKYFSQKSHLCSHQKIHTGEKCFLCIVCGKSFSHKCSLMNHQMIHTGEKPYTCTECGKS
FSRKHYLQIHKQTHTGDKPYKCTDCGKSFSQKSHIYSHRKIHSGVKPYTCTTCGKSFFHK
ISLMSHQMIHTGEKPFACIECGKSFSEKSKLLKHWRVHTGEKPFTCTICGKSFSLKVHLQ
THQVTHTGEKPFACSECGKRFARKSNLQGHQKTHTGDKPFSCTECGRRFTEKNKLLRHWQ
IHSGERSFLCATCGKGFSIRADLRNHQMVHTGEKPFTCTECGKSFSRKSILQGHRKTHTG
EKPFACTECGKCFSASGILVRHQRVHTGEKPFICAECGGCFSQKSILLRHQKTHAK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaggaggttagaggggaaatgggagaatgaagagtcggacactgaggagcct
ctgcctgcaatcaagagagaagtggattcagattctggggccgctttacacggccctgtc
tctcccttactggcagcttcccctgaagaggaattggaaatattacagataaagataaag
gaagaagagcctgagtctgaagatgatctgaacccaatggaaatcttggccgttggggcc
agccgtttgcctgatgaaaccagaacctggatagacttgcggggctcacaagaagaggaa
catgaggattccttggaaaggttaaaggagtggtcggaggcgagtgaagtaattctaggg
gacagagtacagactagagcagagtctggaacaagagatgaggatgactcagcaagtgct
aacggatccggttttatctgcagcaaatgtgggaaatgtttctcagccagtagtgatctt
ctcactcacctttgtgcttctcacaaccaccagcaaattcacacaggagagaaacctttc
tcgtgcccagaatgtgggaaatgtttctctcaaaagacccatctccaacggcatcagaaa
actcacacaggggagaaaccattcacatgcgcagaatgcgggaagaacttcactcagaag
atcacccttgtcaaacaccaggctattcacactggggagaaaccattcatgtgcatagaa
tgcgggaaatacttctctcagaagagccatctttgcagtcaccaaaaaattcacacaggg
gagaaatgttttttgtgtatagtttgtgggaaaagcttctctcataagtgcagccttatg
aaccatcagatgatccacacaggggagaaaccatacacctgcacagaatgcgggaagagc
ttctctcgcaagcattatcttcagatccacaaacaaactcacacaggggataaaccttac
aaatgtacagactgtgggaaaagtttctctcagaagagccacatttacagtcaccggaaa
atccactcaggggtgaaaccttacacgtgcactacatgtgggaagagcttttttcacaag
attagccttatgagccaccagatgattcataccggagagaaaccattcgcctgtatcgaa
tgtggcaaaagcttctctgaaaagagcaaactcctgaaacactggagagttcacacagga
gagaaacctttcacgtgcacgatctgtgggaaaagcttttctctcaaggttcatcttcag
actcatcaagtgactcacacaggagaaaagccattcgcgtgctccgaatgtgggaaaagg
tttgcacgaaagagcaaccttcaagggcatcagaaaactcacacaggggataaacctttc
tcgtgcacagaatgcgggcgaagattcacggaaaagaacaaacttctcaggcactggcag
attcactcgggggagagatctttcctatgcgccacgtgcgggaaaggcttttccatcaga
gctgatcttcgcaaccatcagatggttcacaccggggagaaaccattcacttgcacagaa
tgcggcaagagcttctcccgaaagagcatccttcagggccatcggaaaactcacacaggg
gagaaaccatttgcatgtacagaatgtggcaaatgcttctctgccagcgggatacttgtc
aggcaccagagggttcacacgggagagaaaccttttatctgtgcagaatgtggcgggtgc
ttctcccaaaagagtatccttctgcgacaccaaaagactcacgcaaaataa
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