Xenopus tropicalis (tropical clawed frog): 100487361
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Entry
100487361 CDS
T01011
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100487361
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Others
Ferlins
100487361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
Ferlin_C
FerA
FerI
Pex24p
B9-C2
Motif
Other DBs
NCBI-GeneID:
100487361
NCBI-ProteinID:
XP_031752043
UniProt:
A0A8J1J2G5
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Position
2:complement(15217736..15251025)
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AA seq
1879 aa
AA seq
DB search
MEVSKTRKTFRGLFKPFRMIGKLFQRKPKEPKEDTEVMAEEGRAVLSGTASVPKQQTLQP
YNQPTYIPSRVESTEQSLNFKVLVRTIEGRQLTGNNIKPVVKVKIGHQTQHTRIRSGNNP
YFNQMLTFDMHRSLADLRMESITIQALRSRALRADSLIGEFKLDAGFIYDGPGHAIIRKW
IALYDPKDSSLSPRGYLKVSLFILGKGDQQPIETPGQHEDEDIEKNLLLTSGVARQTISS
VIKIYRANDIPQMDDTFFRSVKGLFRSNVDKKNLADPFTEVAFAGDKIPSMCDNVRLRVY
DWDRANRNDLVATANLALSNISLPVTGLEGTGLKDGFLPTFGPCFINLYGSPREFSRYPD
HYDELNRGLGEGIAYRGRILVELTSTLDDSTRMIGDISRHDVHAAEKYQFKRKYSLCAVF
YSATMLQDAVGAVQFEVSIGNYGNKFDCTCKALPSTTQYRQPQFDGNFYYYIPWSTSKPV
VALTSHWEDISHRLDVVNILIALTDRLQTGLSSLRLALQANLPEAEVVTLWQNVLDQLIE
DAGKHLPSMERRYNVNELDWHRRHLQQSALTHIKAAAAKMRRSAADVQSTLPSIEEWIDR
LKQLSEEPQTSMPDIIIWMIKAERRVAYARIPAHLILFSKTGGEACGKFCGKIQTIFLKY
PLDKGEGRRVPVQLRVNLWLGLSEAESEINQSVHGMFSVHAEMYENQSRISGRWSSRFLL
NHPKFSDATGTIKLKKNSFVVPEGWDWEGDWQVDNERSLPNKDCNGHREMTEEVFVNERR
LPNGKWKLAKEAFTDANGEKSSSPDKIGCPHGWIWDDDTWKCDVTRAVDENGWEYGTPSS
PNNQPQHWVSSEKTYHTRRRRRLVRRRSKVSTPNEEVIPSTTDKGWEYAAVSGWTFHTKR
CGTDTFRRRRWIRNLVPSGQQGAPPIFNLEGNQGSALTADPSDDTEMQRDLYREHVPFVT
CKFDCVYKYHLRCYLYQARGLAPMDRDSFSDPYAHVSFLHKSLRTEIINSTLNPTWDQTL
VFSDIEICGKPREIAQNPPNIVIEIYDNDSRGEDDFLGRSLFFPMVKLDPNVYDTPKLFW
CPVTRGNRHCGDILVAAELFLQENDGCILPVLPSERVPNIYMVPEGIRPVLQLTGIEILT
WGLRSMRHLESVRSATITVECGGQTVETAMTGILGMNPNFQTAVLFLKVYLPQEELYTPP
IVIKVVANRLFGRKEVVGQCTIEQLEEFRCEPYPRNQDNPPDLRVAPITAFAADVIKCVK
ETLTTEEEEDDEVDWWAKYFASKGEHEMSALYTQRKYNTLKVYGCELERVPEFLGLTDFC
QTFKLYTGKAKHDEEPAVAGEFKGSFCIYQVPEDPSAPQPPQHFRELPDSGSQECIVRVY
IVRGIDLQPKDNNGLCDPYIKLSLNDKVVVDRENYIPNTLNPLFGRMYELSCILPQEKDL
KISIYDYDALSGDDKVGETTIDLENRLLSRFRGHCGLPETYCVSGVNQWRDQLKPTEILQ
NLARCRAVPPPVYKDDGRTVIFSGLQYTVKSTEKDHEFLGPMRERVALQALHDQGLVPEH
VETRTLYSSCQPNIPQGKVEMWVDIFPTSLGLPGPAVNIAPRKPKRFVLRTIVWNTKDVI
LDDENVLGEKMSDIYVKGWLLGNEDDKQRTDVHFRSLDGEGNFNWRFVFPFDYLPAEQQC
IISKKDHVWSLDATEQKLPPKLIIQIWDNDKFSRDDYIGFVELDLNNVIMPATEAKKCSL
KLMDRPKETVSLFKKKSMRGWWPCYAEKEDEYVLTGKVELTLEILTEEEAEERPAGKGRD
PPNTNPTLSEPIRPETSFLWFTSIFKAFQVLAWPRLNKLYEDNIGSIRRGCIIAAVVVFV
MFCIFFFIMYILPLILMRR
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctctaaaactcgaaaaactttcagaggtttattcaaaccttttcgaatgatt
ggaaaattattccaaaggaaaccaaaagaacctaaagaagacactgaggttatggctgag
gaaggaagagctgtactgagtggaactgctagtgtccctaagcagcaaactctgcagccc
tacaaccagcccacctacattccctcccgcgtggagagcactgaacagtctctaaacttt
aaggttctggttcggacaatagaaggtcggcagctgactggcaataatataaagccggtt
gtcaaagtgaaaattggacaccagactcaacacacgagaattagatctggcaataaccct
tattttaatcagatgctgaccttcgacatgcacaggtcacttgcggatctgcgtatggag
tccataaccattcaggcacttaggtctcgtgcgcttcgtgcagacagcctgattggtgaa
tttaagcttgatgctggattcatctatgatggaccaggtcatgcgattataagaaaatgg
attgccctgtatgatcctaaggactcgagcttgtctccaaggggctacctgaaggttagc
ctctttattcttggaaaaggagatcagcaaccgattgaaaccccagggcaacatgaagat
gaggacatagaaaagaatctcctgttaacaagcggagtagctcggcagactatatcatct
gtgataaaaatctaccgagctaatgatattccccaaatggatgacacatttttcagaagt
gtaaagggacttttcagatcaaatgtggacaagaagaatttagctgatcccttcacagaa
gtggcatttgctggggataagattccatcaatgtgcgacaatgttaggctcagagtgtat
gactgggacagagcaaataggaatgacctagtagcaactgccaacctggccctgtccaat
atttctttacctgttactggtttagaagggactgggctaaaagatggcttcttaccaacc
tttggaccgtgctttataaacctgtacggaagtccaagggagttcagccgctatcctgac
cactacgatgaactgaatcgtggactgggagaagggatagcctatagaggcagaatccta
gtggagcttacttctactttggacgactccacaaggatgattggagacatctctagacat
gatgttcatgctgctgagaaataccagttcaagcggaaatatagcctgtgtgcggtattc
tattcagcgactatgctgcaagatgccgtcggtgccgtacagtttgaagtgagcatcggc
aattacggcaacaaatttgactgcacatgtaaggcattgccatcgacaacacaatacaga
caacctcaatttgatggcaatttctactactacataccatggtctacctcaaagcctgta
gtagctctaacatctcattgggaagatataagccaccgtctggatgttgtgaatattctc
attgccctgacggatcggctgcaaactggactatcttccttgagattagctctacaagca
aaccttcctgaggcagaagtggttacattatggcagaatgtattggaccagcttattgaa
gatgctgggaaacatctgccttcaatggaaagaagatataatgtgaatgagttagattgg
catcggcgacaccttcagcagtctgccctcactcacataaaggcggcagcagctaaaatg
cgaaggagcgcggccgatgtacagtcaactctaccttccattgaggaatggatagacaga
ctgaaacagctgtcggaagagccacaaaccagtatgccggacatcatcatctggatgata
aaggcagaaagaagagtggcctacgcccgtattcctgcccatcttatcctcttctccaag
accgggggagaggcctgtggcaaattctgcgggaagattcaaacgatatttctaaagtat
cctctcgacaaaggcgaaggcagacgtgttccagttcagctgcgtgtcaacctctggctg
ggactgtctgaagcagagagtgaaattaaccaatccgtgcacggaatgtttagtgttcat
gcagaaatgtatgaaaatcagtcacggatatctggtcgatggagctccaggttcctgcta
aaccaccccaagttctctgatgccactggaacaataaagctgaaaaagaacagctttgtg
gttccagaaggctgggattgggaaggtgattggcaggtagacaatgaaaggagcttaccg
aataaagactgtaacggacaccgagaaatgacagaggaagtgttcgttaatgagaggcgg
cttccaaacggaaaatggaaactggcaaaagaagccttcactgatgctaatggtgaaaaa
tcttcttcgccagataagattggctgccctcatggatggatctgggatgacgatacgtgg
aaatgcgatgtaaccagggctgtggatgaaaatggttgggaatatggaacaccttcatct
cccaataaccagccacagcactgggtttcatccgaaaagacgtatcatacccgccgacgc
cgaagacttgtgcgcaggagatctaaagtctctactcctaatgaggaggttataccctca
acgactgacaaaggatgggagtatgcggctgtgtcaggctggacatttcatacgaagaga
tgcggcactgacactttccgccgaaggcgttggataaggaatctggtcccttctggtcaa
cagggtgcacctcccatatttaacctagaaggcaatcagggcagtgcactgacagctgac
ccaagcgatgatacagagatgcaaagagacctttacagggagcatgttccttttgttacc
tgtaaattcgactgtgtttacaagtaccatctgagatgttacctgtatcaggctcgtggt
ctcgcgccaatggatagagacagcttttcagatccgtacgctcacgtctctttcctacac
aaaagtttgaggacagaaataataaattctaccctcaatccaacatgggaccaaacgctt
gtctttagtgacattgaaatttgtggaaagccccgcgaaattgcacagaatccccccaac
attgttattgagatatatgacaatgattcaaggggagaagatgatttcctcggccgaagt
ttattcttcccaatggtgaagctggacccgaatgtttatgatactcctaaacttttctgg
tgtccagttaccaggggaaatagacactgtggcgacatccttgtggccgcagaactgttc
cttcaggaaaacgatggatgcattctccctgtacttccatcggagcgggtaccaaatatc
tatatggtgccagaaggaattcggcctgtgcttcagcttactggtatagagatacttact
tggggcctacgaagcatgaggcatttggaatctgtaagatcagcaactattactgtagaa
tgcggtggacaaacagttgaaactgcaatgactggaatattgggaatgaatccaaacttc
cagactgcagttctcttcttgaaagtgtatctacctcaagaagaactgtatactccaccc
attgttattaaagtcgtagccaatagactttttggaagaaaggaagtggtagggcaatgt
acaattgagcagctggaagagttccgctgtgagccctaccccaggaatcaggataatcct
ccagaccttagagttgcacctatcactgcattcgctgctgatgtgataaaatgtgtaaaa
gaaactctaacgactgaagaggaggaagatgatgaagttgattggtgggcaaagtacttt
gcctctaaaggagaacatgaaatgtctgcgctgtacacccagaggaaatataatacccta
aaggtgtacggctgtgagttagaacgagtcccagagttccttggactcactgacttttgc
cagacgttcaagttatacacaggaaaggctaaacatgatgaagagccagctgttgcagga
gagttcaagggatctttctgtatttatcaagtcccagaggatccaagtgcccctcaacct
ccacagcacttccgggaattgcctgatagtggttctcaggagtgcattgtgcgagtgtat
atagtgagaggcatagacctgcagccaaaggataacaatggattgtgtgatccttatatc
aaactaagcctgaatgacaaagtggtagtagacagggagaactacatacccaacacttta
aatccattgtttggcagaatgtatgaattaagctgcattctaccgcaagagaaagatctt
aaaatctccatttatgactatgatgctctatctggagatgataaagttggtgaaacaact
atagatcttgaaaacaggctcctctcgcgatttagaggccattgtggactgccagaaacc
tactgcgtatctggagtaaatcaatggcgagatcagctaaagccaactgaaatccttcag
aacttggccagatgtagagccgtaccacctcctgtctataaagatgacgggagaacagtg
atattttcaggattgcaatatactgtaaagagtactgaaaaagatcatgaatttcttggg
ccaatgcgagaacgcgttgctcttcaagcccttcatgatcaaggattagttccagaacat
gttgagacgaggacgttgtacagcagttgccaacccaacattccacaaggaaaagtggaa
atgtgggttgacattttcccaacaagcttaggccttccgggacctgctgtcaatattgcg
cctcgtaaacctaagcggtttgttctacgcacgattgtctggaacaccaaagatgtcatc
ctcgatgatgaaaatgtgttgggagagaaaatgagtgacatttatgtcaaagggtggctt
cttggcaatgaagatgacaaacagagaacagatgtacacttcagatctctggatggagaa
ggcaacttcaattggagatttgtcttcccatttgattacctcccagcagaacaacagtgc
atcatttctaaaaaggaccatgtatggagtcttgatgctactgagcaaaagctgccacct
aaacttattatccagatatgggataatgataaattctcaagagatgactacataggcttt
gttgaactggatttaaataatgtaataatgccagcaacagaagcaaagaagtgttcattg
aagttaatggacaggcctaaagagacagtgtctctgtttaagaagaaatctatgagagga
tggtggccatgttatgcagagaaggaagacgaatatgtgctaacgggcaaagttgaactg
acattggagatcctcaccgaagaagaggcagaagaaaggccagccggcaaggggagagat
cctcccaatacaaacccaacgctgagtgagccaatacgtcctgagacttcgttcctgtgg
ttcacgagcatatttaaggcatttcaagtacttgcatggcccagacttaacaaactatat
gaagacaacattggcagcatccgtagaggatgcattattgccgctgtcgtcgtgtttgtt
atgttctgcatcttcttctttatcatgtacatcctgcctttgattctcatgagacgctga
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integrated database retrieval system
