Xenopus tropicalis (tropical clawed frog): 100487406
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Entry
100487406 CDS
T01011
Symbol
hoxc11
Name
(RefSeq) homeobox protein Hox-C11 isoform X1
KO
K09296
homeobox protein HoxC/D11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487406 (hoxc11)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100487406 (hoxc11)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100487406
NCBI-ProteinID:
XP_002936692
Xenbase:
XB-GENE-486585
UniProt:
A0A8J0QSF9
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Position
2:complement(146119844..146123811)
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AA seq
309 aa
AA seq
DB search
MFNSVNLSNFCSQSRKERSAEFGDRTGCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQIS
YPYSTNLSQPVREVSYGLDPSSKWHPRSNYASCYPAAEDLMHRECLPPSSSMTEMLMKNE
SVYSHHHHHHHHHHPTSNHPSTGFYSSMSKNSVLPQGFDRFFDNAYCGTESQGEDCVPKS
DAKMDSDPQTSALSSGAEQGLDPEDEEENTNPGSSASSSSVTNKEGSKSSNSSAPRTRKK
RCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRL
QYFSGNPLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggttaacctgagcaacttttgttcgcaatcgcgcaaagagaggagtgct
gaatttggagaccggacaggctgcgcttccaacctgtacctccccagctgcacctactat
gtccctgaattctctactgtctcctctttcctgccccaggccccttctcggcagatctcc
tacccttattccaccaacctttcccagccagtgcgggaggtatcctatgggctagacccc
tccagtaaatggcaccctaggagcaactacgcctcctgctaccctgcagctgaggatctg
atgcacagagagtgcctccctccttcttctagcatgaccgaaatgctaatgaaaaacgaa
agcgtgtacagccatcaccaccaccaccaccatcaccaccatcccacctccaaccacccc
tcaacgggcttctactccagtatgagcaaaaacagtgtgctgccccaaggatttgatcgc
ttctttgacaatgcttactgtgggacagagagccagggagaggactgtgtgcccaagagc
gatgccaagatggacagtgacccccaaaccagcgctctgtcatccggagctgagcaggga
ctagacccggaagacgaagaggaaaatacaaacccgggctcgtcagcctcatcctcttct
gtcaccaataaggaagggagcaagagcagcaattccagtgctcctcgtacaagaaagaag
aggtgtccctactctaagttccagatccgagaattggagagggagtttttcttcaatgtg
tatattaacaaagagaagaggcttcagttgtccagaatgctgaatctcactgaccgccag
gttaaaatttggtttcagaacagaagaatgaaagaaaaaaaacttagcagggaccgactg
cagtacttttccgggaacccattgctgtga
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